RNA–Protein interactions for RNA: ENST00000570676.1

RAB40B-203, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-203ENST00000570676 NID2Q14112 1375 aa17.33■□□□□ 0.36
RAB40B-203ENST00000570676 CD2BP2O95400 341 aaKnown RBP17.33■□□□□ 0.36
RAB40B-203ENST00000570676 LGALS2P05162 132 aa17.33■□□□□ 0.36
RAB40B-203ENST00000570676 ANP32AP39687 249 aaKnown RBP17.33■□□□□ 0.36
RAB40B-203ENST00000570676 RAB30Q15771 203 aa17.33■□□□□ 0.36
RAB40B-203ENST00000570676 RTN1Q16799 776 aa17.33■□□□□ 0.36
RAB40B-203ENST00000570676 WWC2Q6AWC2 1192 aa17.33■□□□□ 0.36
RAB40B-203ENST00000570676 TYW1BQ6NUM6 668 aa17.33■□□□□ 0.36
RAB40B-203ENST00000570676 XRRA1Q6P2D8 792 aa17.33■□□□□ 0.36
RAB40B-203ENST00000570676 METTL7BQ6UX53 244 aa17.33■□□□□ 0.36
RAB40B-203ENST00000570676 SYNE3Q6ZMZ3 975 aa17.33■□□□□ 0.36
RAB40B-203ENST00000570676 FBXL16Q8N461 479 aa17.33■□□□□ 0.36
RAB40B-203ENST00000570676 CCDC155Q8N6L0 562 aa17.33■□□□□ 0.36
RAB40B-203ENST00000570676 C7orf31Q8N865 590 aa17.33■□□□□ 0.36
RAB40B-203ENST00000570676 RETREG2Q8NC44 543 aa17.33■□□□□ 0.36
RAB40B-203ENST00000570676 BRF1Q92994 677 aa17.33■□□□□ 0.36
RAB40B-203ENST00000570676 WNT8BQ93098 351 aa17.33■□□□□ 0.36
RAB40B-203ENST00000570676 LARP6Q9BRS8 491 aaKnown RBP17.33■□□□□ 0.36
RAB40B-203ENST00000570676 AGXT2Q9BYV1 514 aa17.33■□□□□ 0.36
RAB40B-203ENST00000570676 PSTPIP2Q9H939 334 aa17.33■□□□□ 0.36
RAB40B-203ENST00000570676 MLXIPQ9HAP2 919 aa17.33■□□□□ 0.36
RAB40B-203ENST00000570676 FAM217BQ9NTX9 383 aaPredicted RBP17.33■□□□□ 0.36
RAB40B-203ENST00000570676 YBX2Q9Y2T7 364 aaKnown RBP17.33■□□□□ 0.36
RAB40B-203ENST00000570676 TELO2Q9Y4R8 837 aa17.33■□□□□ 0.36
RAB40B-203ENST00000570676 KLF18A0A0U1RQI7 1052 aa17.32■□□□□ 0.36
RAB40B-203ENST00000570676 ZBBXA8MT70 800 aa17.32■□□□□ 0.36
RAB40B-203ENST00000570676 ZBTB43O43298 467 aa17.32■□□□□ 0.36
RAB40B-203ENST00000570676 FOSL2P15408 326 aa17.32■□□□□ 0.36
RAB40B-203ENST00000570676 HOXC8P31273 242 aa17.32■□□□□ 0.36
RAB40B-203ENST00000570676 RCAN1P53805 252 aa17.32■□□□□ 0.36
RAB40B-203ENST00000570676 NEDD9Q14511 834 aa17.32■□□□□ 0.36
RAB40B-203ENST00000570676 GPNMBQ14956 572 aa17.32■□□□□ 0.36
RAB40B-203ENST00000570676 TRIM71Q2Q1W2 868 aaKnown RBP17.32■□□□□ 0.36
RAB40B-203ENST00000570676 TRAF7Q6Q0C0 670 aa17.32■□□□□ 0.36
RAB40B-203ENST00000570676 LRRC8DQ7L1W4 858 aa17.32■□□□□ 0.36
RAB40B-203ENST00000570676 CYFIP1Q7L576 1253 aa17.32■□□□□ 0.36
RAB40B-203ENST00000570676 HEATR3Q7Z4Q2 680 aa17.32■□□□□ 0.36
RAB40B-203ENST00000570676 GPR20Q99678 358 aa17.32■□□□□ 0.36
RAB40B-203ENST00000570676 SLC4A7Q9Y6M7 1214 aa17.32■□□□□ 0.36
RAB40B-203ENST00000570676 MICAL3Q7RTP6 2002 aa17.31■□□□□ 0.36
RAB40B-203ENST00000570676 GOLGA8AA7E2F4 631 aa17.31■□□□□ 0.36
RAB40B-203ENST00000570676 GOLGA8BA8MQT2 603 aa17.31■□□□□ 0.36
RAB40B-203ENST00000570676 SELPP16109 830 aa17.31■□□□□ 0.36
RAB40B-203ENST00000570676 CDC27P30260 824 aa17.31■□□□□ 0.36
RAB40B-203ENST00000570676 MCM2P49736 904 aa17.31■□□□□ 0.36
RAB40B-203ENST00000570676 ZNF200P98182 395 aaPredicted RBP17.31■□□□□ 0.36
RAB40B-203ENST00000570676 APOBRQ0VD83 1088 aa17.31■□□□□ 0.36
RAB40B-203ENST00000570676 PTK7Q13308 1070 aa17.31■□□□□ 0.36
RAB40B-203ENST00000570676 PPP1R18Q6NYC8 613 aa17.31■□□□□ 0.36
RAB40B-203ENST00000570676 MAFAQ8NHW3 353 aaPredicted RBP17.31■□□□□ 0.36
RAB40B-203ENST00000570676 SNX21Q969T3 373 aa17.31■□□□□ 0.36
RAB40B-203ENST00000570676 GPRASP2Q96D09 838 aa17.31■□□□□ 0.36
RAB40B-203ENST00000570676 SENP7Q9BQF6 1050 aa17.31■□□□□ 0.36
RAB40B-203ENST00000570676 NKX2-4Q9H2Z4 354 aa17.31■□□□□ 0.36
RAB40B-203ENST00000570676 COL4A4P53420 1690 aaPredicted RBP17.31■□□□□ 0.36
RAB40B-203ENST00000570676 RBAK-RBAKDNI3L0D1 243 aa17.3■□□□□ 0.36
RAB40B-203ENST00000570676 CKBP12277 381 aa17.3■□□□□ 0.36
RAB40B-203ENST00000570676 ATP2A2P16615 1042 aaKnown RBP17.3■□□□□ 0.36
RAB40B-203ENST00000570676 ITGB5P18084 799 aa17.3■□□□□ 0.36
RAB40B-203ENST00000570676 RABGGTBP53611 331 aa17.3■□□□□ 0.36
RAB40B-203ENST00000570676 NLRX1Q86UT6 975 aa17.3■□□□□ 0.36
RAB40B-203ENST00000570676 TRIM50Q86XT4 487 aa17.3■□□□□ 0.36
RAB40B-203ENST00000570676 HSCBQ8IWL3 235 aa17.3■□□□□ 0.36
RAB40B-203ENST00000570676 MSRAQ9UJ68 235 aa17.3■□□□□ 0.36
RAB40B-203ENST00000570676 NAP1L2Q9ULW6 460 aaPredicted RBP17.3■□□□□ 0.36
RAB40B-203ENST00000570676 LIMCH1Q9UPQ0 1083 aa17.3■□□□□ 0.36
RAB40B-203ENST00000570676 UBIAD1Q9Y5Z9 338 aa17.3■□□□□ 0.36
RAB40B-203ENST00000570676 SPDYE3A6NKU9 549 aa17.29■□□□□ 0.36
RAB40B-203ENST00000570676 H3BRB1 525 aa17.29■□□□□ 0.36
RAB40B-203ENST00000570676 hCG_1984214I3L0E3 225 aa17.29■□□□□ 0.36
RAB40B-203ENST00000570676 STXBP3O00186 592 aa17.29■□□□□ 0.36
RAB40B-203ENST00000570676 NOP56O00567 594 aaKnown RBP17.29■□□□□ 0.36
RAB40B-203ENST00000570676 NBNO60934 754 aa17.29■□□□□ 0.36
RAB40B-203ENST00000570676 CXCL10P02778 98 aa17.29■□□□□ 0.36
RAB40B-203ENST00000570676 ACTN1P12814 892 aa17.29■□□□□ 0.36
RAB40B-203ENST00000570676 KCNA2P16389 499 aa17.29■□□□□ 0.36
RAB40B-203ENST00000570676 ZNF713Q8N859 430 aaPredicted RBP17.29■□□□□ 0.36
RAB40B-203ENST00000570676 SLC9A7Q96T83 725 aa17.29■□□□□ 0.36
RAB40B-203ENST00000570676 TUT1Q9H6E5 874 aaKnown RBP17.29■□□□□ 0.36
RAB40B-203ENST00000570676 RIC8AQ9NPQ8 531 aa17.29■□□□□ 0.36
RAB40B-203ENST00000570676 TPCN1Q9ULQ1 816 aa17.29■□□□□ 0.36
RAB40B-203ENST00000570676 PCDHA6Q9UN73 950 aa17.29■□□□□ 0.36
RAB40B-203ENST00000570676 PCDHA8Q9Y5H6 950 aa17.29■□□□□ 0.36
RAB40B-203ENST00000570676 PCDHA11Q9Y5I1 949 aa17.29■□□□□ 0.36
RAB40B-203ENST00000570676 KAT6AQ92794 2004 aa17.29■□□□□ 0.36
RAB40B-203ENST00000570676 ATP9AO75110 1047 aa17.28■□□□□ 0.36
RAB40B-203ENST00000570676 BAIAP3O94812 1187 aa17.28■□□□□ 0.36
RAB40B-203ENST00000570676 SMIM10L2AP0DMW4 78 aa17.28■□□□□ 0.36
RAB40B-203ENST00000570676 SMIM10L2BP0DMW5 78 aa17.28■□□□□ 0.36
RAB40B-203ENST00000570676 MYOGP15173 224 aa17.28■□□□□ 0.36
RAB40B-203ENST00000570676 NAPAP54920 295 aa17.28■□□□□ 0.36
RAB40B-203ENST00000570676 MBTPS1Q14703 1052 aa17.28■□□□□ 0.36
RAB40B-203ENST00000570676 TCTN1Q2MV58 587 aa17.28■□□□□ 0.36
RAB40B-203ENST00000570676 SERINC5Q86VE9 423 aa17.28■□□□□ 0.36
RAB40B-203ENST00000570676 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.28■□□□□ 0.36
RAB40B-203ENST00000570676 FTOQ9C0B1 505 aaKnown RBP eCLIP17.28■□□□□ 0.36
RAB40B-203ENST00000570676 PRDM12Q9H4Q4 367 aa17.28■□□□□ 0.36
RAB40B-203ENST00000570676 C17orf102A2RUQ5 167 aa17.27■□□□□ 0.36
RAB40B-203ENST00000570676 PARNO95453 639 aaKnown RBP17.27■□□□□ 0.36
RAB40B-203ENST00000570676 METAP2P50579 478 aaKnown RBP eCLIP17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms