RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 NEK9Q8TD19 979 aa14.42□□□□□ -0.1
CLK3-214ENST00000564096 SNX29Q8TEQ0 813 aa14.42□□□□□ -0.1
CLK3-214ENST00000564096 SCFD2Q8WU76 684 aa14.42□□□□□ -0.1
CLK3-214ENST00000564096 ERO1AQ96HE7 468 aa14.42□□□□□ -0.1
CLK3-214ENST00000564096 CCSER1Q9C0I3 900 aa14.42□□□□□ -0.1
CLK3-214ENST00000564096 NT5C3AQ9H0P0 336 aa14.42□□□□□ -0.1
CLK3-214ENST00000564096 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.42□□□□□ -0.1
CLK3-214ENST00000564096 PKD2L1Q9P0L9 805 aa14.42□□□□□ -0.1
CLK3-214ENST00000564096 VAV3Q9UKW4 847 aa14.42□□□□□ -0.1
CLK3-214ENST00000564096 SPATA31C2B4DYI2 1134 aa14.41□□□□□ -0.1
CLK3-214ENST00000564096 CHMP2AO43633 222 aa14.41□□□□□ -0.1
CLK3-214ENST00000564096 ECM2O94769 699 aaPredicted RBP14.41□□□□□ -0.1
CLK3-214ENST00000564096 LIG1P18858 919 aa14.41□□□□□ -0.1
CLK3-214ENST00000564096 SFNP31947 248 aa14.41□□□□□ -0.1
CLK3-214ENST00000564096 JAK3P52333 1124 aa14.41□□□□□ -0.1
CLK3-214ENST00000564096 NEDD9Q14511 834 aa14.41□□□□□ -0.1
CLK3-214ENST00000564096 TTLL4Q14679 1199 aa14.41□□□□□ -0.1
CLK3-214ENST00000564096 CAVIN1Q6NZI2 390 aaKnown RBP14.41□□□□□ -0.1
CLK3-214ENST00000564096 FBXO16Q8IX29 292 aaPredicted RBP14.41□□□□□ -0.1
CLK3-214ENST00000564096 SMAP1Q8IYB5 467 aaPredicted RBP14.41□□□□□ -0.1
CLK3-214ENST00000564096 TRMT44Q8IYL2 757 aaKnown RBP14.41□□□□□ -0.1
CLK3-214ENST00000564096 CEP57L1Q8IYX8 460 aa14.41□□□□□ -0.1
CLK3-214ENST00000564096 IQUBQ8NA54 791 aa14.41□□□□□ -0.1
CLK3-214ENST00000564096 RDM1Q8NG50 284 aa14.41□□□□□ -0.1
CLK3-214ENST00000564096 EPSTI1Q96J88 318 aa14.41□□□□□ -0.1
CLK3-214ENST00000564096 ZFP91Q96JP5 570 aaPredicted RBP14.41□□□□□ -0.1
CLK3-214ENST00000564096 SENP7Q9BQF6 1050 aa14.41□□□□□ -0.1
CLK3-214ENST00000564096 TINF2Q9BSI4 451 aa14.41□□□□□ -0.1
CLK3-214ENST00000564096 NUP62CLQ9H1M0 184 aa14.41□□□□□ -0.1
CLK3-214ENST00000564096 CUEDC2Q9H467 287 aa14.41□□□□□ -0.1
CLK3-214ENST00000564096 MAGEF1Q9HAY2 307 aa14.41□□□□□ -0.1
CLK3-214ENST00000564096 JPH1Q9HDC5 661 aaPredicted RBP14.41□□□□□ -0.1
CLK3-214ENST00000564096 DISC1Q9NRI5 854 aa14.41□□□□□ -0.1
CLK3-214ENST00000564096 DACT1Q9NYF0 836 aa14.41□□□□□ -0.1
CLK3-214ENST00000564096 WDR64B1ANS9 1081 aa14.4□□□□□ -0.1
CLK3-214ENST00000564096 GPR25O00155 361 aa14.4□□□□□ -0.1
CLK3-214ENST00000564096 CTAGE5O15320 804 aa14.4□□□□□ -0.1
CLK3-214ENST00000564096 NR1I2O75469 434 aa14.4□□□□□ -0.1
CLK3-214ENST00000564096 RGS20O76081 388 aa14.4□□□□□ -0.1
CLK3-214ENST00000564096 XRCC5P13010 732 aaKnown RBP14.4□□□□□ -0.1
CLK3-214ENST00000564096 KCNA2P16389 499 aa14.4□□□□□ -0.1
CLK3-214ENST00000564096 CCT6AP40227 531 aaKnown RBP14.4□□□□□ -0.1
CLK3-214ENST00000564096 STAT6P42226 847 aa14.4□□□□□ -0.1
CLK3-214ENST00000564096 SPIRE1Q08AE8 756 aa14.4□□□□□ -0.1
CLK3-214ENST00000564096 ITGB3BPQ13352 177 aaPredicted RBP14.4□□□□□ -0.1
CLK3-214ENST00000564096 ZNF746Q6NUN9 644 aaPredicted RBP14.4□□□□□ -0.1
CLK3-214ENST00000564096 KANK3Q6NY19 840 aa14.4□□□□□ -0.1
CLK3-214ENST00000564096 EEPD1Q7L9B9 569 aa14.4□□□□□ -0.1
CLK3-214ENST00000564096 MIER3Q7Z3K6 550 aa14.4□□□□□ -0.1
CLK3-214ENST00000564096 FMR1NBQ8N0W7 255 aaPredicted RBP14.4□□□□□ -0.1
CLK3-214ENST00000564096 USP6NLQ92738 828 aa14.4□□□□□ -0.1
CLK3-214ENST00000564096 TRIM47Q96LD4 638 aa14.4□□□□□ -0.1
CLK3-214ENST00000564096 TIGD1Q96MW7 591 aa14.4□□□□□ -0.1
CLK3-214ENST00000564096 ABHD16BQ9H3Z7 469 aa14.4□□□□□ -0.1
CLK3-214ENST00000564096 ZHX1Q9UKY1 873 aaPredicted RBP14.4□□□□□ -0.1
CLK3-214ENST00000564096 SAMM50Q9Y512 469 aa14.4□□□□□ -0.1
CLK3-214ENST00000564096 PP2D1A8MPX8 630 aa14.39□□□□□ -0.11
CLK3-214ENST00000564096 DDX39AO00148 427 aaKnown RBP14.39□□□□□ -0.11
CLK3-214ENST00000564096 POLR2DO15514 142 aaKnown RBP14.39□□□□□ -0.11
CLK3-214ENST00000564096 FKTNO75072 461 aa14.39□□□□□ -0.11
CLK3-214ENST00000564096 ZNF202O95125 648 aa14.39□□□□□ -0.11
CLK3-214ENST00000564096 CYP2B6P20813 491 aa14.39□□□□□ -0.11
CLK3-214ENST00000564096 UBA1P22314 1058 aaKnown RBP14.39□□□□□ -0.11
CLK3-214ENST00000564096 KARSQ15046 597 aaKnown RBP14.39□□□□□ -0.11
CLK3-214ENST00000564096 ZRSR1Q15695 479 aaKnown RBP14.39□□□□□ -0.11
CLK3-214ENST00000564096 RRAGBQ5VZM2 374 aa14.39□□□□□ -0.11
CLK3-214ENST00000564096 OTOP1Q7RTM1 612 aa14.39□□□□□ -0.11
CLK3-214ENST00000564096 KCTD17Q8N5Z5 321 aa14.39□□□□□ -0.11
CLK3-214ENST00000564096 PDILTQ8N807 584 aa14.39□□□□□ -0.11
CLK3-214ENST00000564096 CNNM3Q8NE01 707 aa14.39□□□□□ -0.11
CLK3-214ENST00000564096 ENGASEQ8NFI3 743 aa14.39□□□□□ -0.11
CLK3-214ENST00000564096 NPLOC4Q8TAT6 608 aa14.39□□□□□ -0.11
CLK3-214ENST00000564096 GJA10Q969M2 543 aa14.39□□□□□ -0.11
CLK3-214ENST00000564096 DHX58Q96C10 678 aa14.39□□□□□ -0.11
CLK3-214ENST00000564096 UIMC1Q96RL1 719 aa14.39□□□□□ -0.11
CLK3-214ENST00000564096 TNMDQ9H2S6 317 aa14.39□□□□□ -0.11
CLK3-214ENST00000564096 UNC45AQ9H3U1 944 aa14.39□□□□□ -0.11
CLK3-214ENST00000564096 CLSTN2Q9H4D0 955 aa14.39□□□□□ -0.11
CLK3-214ENST00000564096 SLC9A2Q9UBY0 812 aa14.39□□□□□ -0.11
CLK3-214ENST00000564096 STK17AQ9UEE5 414 aa14.39□□□□□ -0.11
CLK3-214ENST00000564096 NRBP1Q9UHY1 535 aa14.39□□□□□ -0.11
CLK3-214ENST00000564096 DKC1O60832 514 aaKnown RBP eCLIP14.38□□□□□ -0.11
CLK3-214ENST00000564096 LETM1O95202 739 aaPredicted RBP14.38□□□□□ -0.11
CLK3-214ENST00000564096 MUTP22033 750 aa14.38□□□□□ -0.11
CLK3-214ENST00000564096 PRKCZQ05513 592 aa14.38□□□□□ -0.11
CLK3-214ENST00000564096 SEMA3FQ13275 785 aa14.38□□□□□ -0.11
CLK3-214ENST00000564096 SNW1Q13573 536 aaKnown RBP14.38□□□□□ -0.11
CLK3-214ENST00000564096 EPHA7Q15375 998 aa14.38□□□□□ -0.11
CLK3-214ENST00000564096 MFSD14CQ5VZR4 134 aa14.38□□□□□ -0.11
CLK3-214ENST00000564096 METTL7BQ6UX53 244 aa14.38□□□□□ -0.11
CLK3-214ENST00000564096 CD99L2Q8TCZ2 262 aa14.38□□□□□ -0.11
CLK3-214ENST00000564096 POLR3CQ9BUI4 534 aaPredicted RBP14.38□□□□□ -0.11
CLK3-214ENST00000564096 ARHGAP39Q9C0H5 1083 aa14.38□□□□□ -0.11
CLK3-214ENST00000564096 TUFT1Q9NNX1 390 aa14.38□□□□□ -0.11
CLK3-214ENST00000564096 GJD2Q9UKL4 321 aa14.38□□□□□ -0.11
CLK3-214ENST00000564096 PLXNA1Q9UIW2 1896 aa14.38□□□□□ -0.11
CLK3-214ENST00000564096 NOP56O00567 594 aaKnown RBP14.37□□□□□ -0.11
CLK3-214ENST00000564096 NKRFO15226 690 aaKnown RBP eCLIP14.37□□□□□ -0.11
CLK3-214ENST00000564096 DHX15O43143 795 aaKnown RBP14.37□□□□□ -0.11
CLK3-214ENST00000564096 GGPS1O95749 300 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms