RNA–Protein interactions for RNA: ENST00000561637.5

NME3-202, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-202ENST00000561637 CASTP20810 708 aaKnown RBP29.14■■■□□ 2.26
NME3-202ENST00000561637 PSEN2P49810 448 aa29.14■■■□□ 2.26
NME3-202ENST00000561637 GRB10Q13322 594 aa29.14■■■□□ 2.26
NME3-202ENST00000561637 DGKDQ16760 1214 aa29.14■■■□□ 2.26
NME3-202ENST00000561637 UBE2SQ16763 222 aa29.14■■■□□ 2.26
NME3-202ENST00000561637 HERC6Q8IVU3 1022 aa29.14■■■□□ 2.26
NME3-202ENST00000561637 PHOSPHO2Q8TCD6 241 aa29.14■■■□□ 2.26
NME3-202ENST00000561637 DHX38Q92620 1227 aaKnown RBP29.14■■■□□ 2.26
NME3-202ENST00000561637 HLA-CQ95604 372 aa29.14■■■□□ 2.26
NME3-202ENST00000561637 SPATA33Q96N06 139 aa29.14■■■□□ 2.26
NME3-202ENST00000561637 C11orf16Q9NQ32 467 aa29.14■■■□□ 2.26
NME3-202ENST00000561637 DOCK5Q9H7D0 1870 aa29.14■■■□□ 2.26
NME3-202ENST00000561637 LPXNO60711 386 aa29.13■■■□□ 2.25
NME3-202ENST00000561637 HIC1Q14526 733 aa29.13■■■□□ 2.25
NME3-202ENST00000561637 TSGA10IPQ3SY00 556 aa29.13■■■□□ 2.25
NME3-202ENST00000561637 TMEM31Q5JXX7 168 aa29.13■■■□□ 2.25
NME3-202ENST00000561637 DHX32Q7L7V1 743 aaKnown RBP29.13■■■□□ 2.25
NME3-202ENST00000561637 SMARCC2Q8TAQ2 1214 aa29.13■■■□□ 2.25
NME3-202ENST00000561637 HDAC6Q9UBN7 1215 aa29.13■■■□□ 2.25
NME3-202ENST00000561637 HCN4Q9Y3Q4 1203 aa29.13■■■□□ 2.25
NME3-202ENST00000561637 ARIH1Q9Y4X5 557 aaPredicted RBP29.13■■■□□ 2.25
NME3-202ENST00000561637 CNTNAP5Q8WYK1 1306 aa29.13■■■□□ 2.25
NME3-202ENST00000561637 HOXD8P13378 290 aaPredicted RBP29.12■■■□□ 2.25
NME3-202ENST00000561637 RFC2P35250 354 aa29.12■■■□□ 2.25
NME3-202ENST00000561637 PTPN11Q06124 597 aaPredicted RBP29.12■■■□□ 2.25
NME3-202ENST00000561637 MFSD10Q14728 455 aa29.12■■■□□ 2.25
NME3-202ENST00000561637 PTGISQ16647 500 aa29.12■■■□□ 2.25
NME3-202ENST00000561637 FTOQ9C0B1 505 aaKnown RBP eCLIP29.12■■■□□ 2.25
NME3-202ENST00000561637 F2P00734 622 aa29.11■■■□□ 2.25
NME3-202ENST00000561637 ZNF200P98182 395 aaPredicted RBP29.11■■■□□ 2.25
NME3-202ENST00000561637 INPP4AQ96PE3 977 aaPredicted RBP29.11■■■□□ 2.25
NME3-202ENST00000561637 FAM86C2PA6NEL3 165 aa29.1■■■□□ 2.25
NME3-202ENST00000561637 HAS3O00219 553 aa29.1■■■□□ 2.25
NME3-202ENST00000561637 PIK3CDO00329 1044 aa29.1■■■□□ 2.25
NME3-202ENST00000561637 FUT2Q10981 343 aa29.1■■■□□ 2.25
NME3-202ENST00000561637 KIAA0753Q2KHM9 967 aa29.1■■■□□ 2.25
NME3-202ENST00000561637 TYW1BQ6NUM6 668 aa29.1■■■□□ 2.25
NME3-202ENST00000561637 HEATR3Q7Z4Q2 680 aa29.1■■■□□ 2.25
NME3-202ENST00000561637 SESTD1Q86VW0 696 aa29.1■■■□□ 2.25
NME3-202ENST00000561637 CUL5Q93034 780 aa29.1■■■□□ 2.25
NME3-202ENST00000561637 WNT8BQ93098 351 aa29.1■■■□□ 2.25
NME3-202ENST00000561637 CD320Q9NPF0 282 aa29.1■■■□□ 2.25
NME3-202ENST00000561637 FAM217BQ9NTX9 383 aaPredicted RBP29.1■■■□□ 2.25
NME3-202ENST00000561637 NOD1Q9Y239 953 aa29.1■■■□□ 2.25
NME3-202ENST00000561637 KLF18A0A0U1RQI7 1052 aa29.09■■■□□ 2.25
NME3-202ENST00000561637 LCHNA4D1U4 455 aa29.09■■■□□ 2.25
NME3-202ENST00000561637 PITPNM1O00562 1244 aa29.09■■■□□ 2.25
NME3-202ENST00000561637 WWC2Q6AWC2 1192 aa29.09■■■□□ 2.25
NME3-202ENST00000561637 KCNV1Q6PIU1 500 aa29.09■■■□□ 2.25
NME3-202ENST00000561637 TMCO2Q7Z6W1 182 aaPredicted RBP29.09■■■□□ 2.25
NME3-202ENST00000561637 RETREG2Q8NC44 543 aa29.09■■■□□ 2.25
NME3-202ENST00000561637 KCNB2Q92953 911 aa29.09■■■□□ 2.25
NME3-202ENST00000561637 PSTPIP2Q9H939 334 aa29.09■■■□□ 2.25
NME3-202ENST00000561637 GTF2IRD1Q9UHL9 959 aa29.09■■■□□ 2.25
NME3-202ENST00000561637 SNX14Q9Y5W7 946 aa29.09■■■□□ 2.25
NME3-202ENST00000561637 SPATA31C2B4DYI2 1134 aa29.08■■■□□ 2.25
NME3-202ENST00000561637 KIF28PB7ZC32 967 aa29.08■■■□□ 2.25
NME3-202ENST00000561637 CDC27P30260 824 aa29.08■■■□□ 2.25
NME3-202ENST00000561637 RTN1Q16799 776 aa29.08■■■□□ 2.25
NME3-202ENST00000561637 C16orf70Q9BSU1 422 aa29.08■■■□□ 2.25
NME3-202ENST00000561637 MLXIPQ9HAP2 919 aa29.08■■■□□ 2.25
NME3-202ENST00000561637 ZBTB43O43298 467 aa29.07■■■□□ 2.24
NME3-202ENST00000561637 ICAM3P32942 547 aa29.07■■■□□ 2.24
NME3-202ENST00000561637 GPNMBQ14956 572 aa29.07■■■□□ 2.24
NME3-202ENST00000561637 PCNX4Q63HM2 1172 aa29.07■■■□□ 2.24
NME3-202ENST00000561637 SYNE3Q6ZMZ3 975 aa29.07■■■□□ 2.24
NME3-202ENST00000561637 CYFIP1Q7L576 1253 aa29.07■■■□□ 2.24
NME3-202ENST00000561637 JAKMIP1Q96N16 626 aaKnown RBP29.07■■■□□ 2.24
NME3-202ENST00000561637 GOLGA8AA7E2F4 631 aa29.06■■■□□ 2.24
NME3-202ENST00000561637 GOLGA8BA8MQT2 603 aa29.06■■■□□ 2.24
NME3-202ENST00000561637 GPR37L1O60883 481 aa29.06■■■□□ 2.24
NME3-202ENST00000561637 TGFB3P10600 412 aa29.06■■■□□ 2.24
NME3-202ENST00000561637 HSPA4P34932 840 aa29.06■■■□□ 2.24
NME3-202ENST00000561637 C7orf31Q8N865 590 aa29.06■■■□□ 2.24
NME3-202ENST00000561637 PPFIA4O75335 1185 aa29.05■■■□□ 2.24
NME3-202ENST00000561637 SP4Q02446 784 aa29.05■■■□□ 2.24
NME3-202ENST00000561637 APOBRQ0VD83 1088 aa29.05■■■□□ 2.24
NME3-202ENST00000561637 KRT32Q14532 448 aa29.05■■■□□ 2.24
NME3-202ENST00000561637 GNPTABQ3T906 1256 aa29.05■■■□□ 2.24
NME3-202ENST00000561637 TRIM50Q86XT4 487 aa29.05■■■□□ 2.24
NME3-202ENST00000561637 GDPD5Q8WTR4 605 aa29.05■■■□□ 2.24
NME3-202ENST00000561637 PGBD1Q96JS3 809 aa29.05■■■□□ 2.24
NME3-202ENST00000561637 NAP1L2Q9ULW6 460 aaPredicted RBP29.05■■■□□ 2.24
NME3-202ENST00000561637 FIBPO43427 364 aa29.04■■■□□ 2.24
NME3-202ENST00000561637 LGALS2P05162 132 aa29.04■■■□□ 2.24
NME3-202ENST00000561637 BFSP2Q13515 415 aa29.04■■■□□ 2.24
NME3-202ENST00000561637 TCTN1Q2MV58 587 aa29.04■■■□□ 2.24
NME3-202ENST00000561637 Q6ZUG5 572 aa29.04■■■□□ 2.24
NME3-202ENST00000561637 KATNAL1Q9BW62 490 aa29.04■■■□□ 2.24
NME3-202ENST00000561637 V9GY48 417 aaPredicted RBP29.04■■■□□ 2.24
NME3-202ENST00000561637 SIP14410 1827 aa29.04■■■□□ 2.24
NME3-202ENST00000561637 ATP9AO75110 1047 aa29.03■■■□□ 2.24
NME3-202ENST00000561637 BAIAP3O94812 1187 aa29.03■■■□□ 2.24
NME3-202ENST00000561637 ITGB5P18084 799 aa29.03■■■□□ 2.24
NME3-202ENST00000561637 WDR5P61964 334 aaKnown RBP29.03■■■□□ 2.24
NME3-202ENST00000561637 TRIM71Q2Q1W2 868 aaKnown RBP29.03■■■□□ 2.24
NME3-202ENST00000561637 GPR20Q99678 358 aa29.03■■■□□ 2.24
NME3-202ENST00000561637 RBM28Q9NW13 759 aaKnown RBP29.03■■■□□ 2.24
NME3-202ENST00000561637 PKD2L1Q9P0L9 805 aa29.03■■■□□ 2.24
NME3-202ENST00000561637 MUC6Q6W4X9 2439 aa29.03■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms