RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 LGALS2P05162 132 aa13.7□□□□□ -0.22
CARMIL3-204ENST00000561354 SMIM10L2AP0DMW4 78 aa13.7□□□□□ -0.22
CARMIL3-204ENST00000561354 SMIM10L2BP0DMW5 78 aa13.7□□□□□ -0.22
CARMIL3-204ENST00000561354 NEDD9Q14511 834 aa13.7□□□□□ -0.22
CARMIL3-204ENST00000561354 GNPTABQ3T906 1256 aa13.7□□□□□ -0.22
CARMIL3-204ENST00000561354 LEXMQ3ZCV2 418 aa13.7□□□□□ -0.22
CARMIL3-204ENST00000561354 FCHSD1Q86WN1 690 aa13.7□□□□□ -0.22
CARMIL3-204ENST00000561354 HOMER1Q86YM7 354 aa13.7□□□□□ -0.22
CARMIL3-204ENST00000561354 MYOCDQ8IZQ8 938 aa13.7□□□□□ -0.22
CARMIL3-204ENST00000561354 FBXO22Q8NEZ5 403 aa13.7□□□□□ -0.22
CARMIL3-204ENST00000561354 SEPT8Q92599 483 aa13.7□□□□□ -0.22
CARMIL3-204ENST00000561354 GPKOWQ92917 476 aaPredicted RBP eCLIP13.7□□□□□ -0.22
CARMIL3-204ENST00000561354 SAMD11Q96NU1 681 aa13.7□□□□□ -0.22
CARMIL3-204ENST00000561354 C17orf80Q9BSJ5 609 aa13.7□□□□□ -0.22
CARMIL3-204ENST00000561354 USP26Q9BXU7 913 aa13.7□□□□□ -0.22
CARMIL3-204ENST00000561354 RNPEPQ9H4A4 650 aa13.7□□□□□ -0.22
CARMIL3-204ENST00000561354 FRMPD4Q14CM0 1322 aa13.69□□□□□ -0.22
CARMIL3-204ENST00000561354 SPATA31C2B4DYI2 1134 aa13.69□□□□□ -0.22
CARMIL3-204ENST00000561354 PI4K2BG5E9Z4 385 aa13.69□□□□□ -0.22
CARMIL3-204ENST00000561354 NOP56O00567 594 aaKnown RBP13.69□□□□□ -0.22
CARMIL3-204ENST00000561354 TREHO43280 583 aa13.69□□□□□ -0.22
CARMIL3-204ENST00000561354 MRPS9P82933 396 aaKnown RBP13.69□□□□□ -0.22
CARMIL3-204ENST00000561354 TROAPQ12815 778 aa13.69□□□□□ -0.22
CARMIL3-204ENST00000561354 METTL7BQ6UX53 244 aa13.69□□□□□ -0.22
CARMIL3-204ENST00000561354 KHSRPQ92945 711 aaKnown RBP eCLIP13.69□□□□□ -0.22
CARMIL3-204ENST00000561354 TOP1MTQ969P6 601 aa13.69□□□□□ -0.22
CARMIL3-204ENST00000561354 MRPL38Q96DV4 380 aaKnown RBP13.69□□□□□ -0.22
CARMIL3-204ENST00000561354 ZFP91Q96JP5 570 aaPredicted RBP13.69□□□□□ -0.22
CARMIL3-204ENST00000561354 INPP4AQ96PE3 977 aaPredicted RBP13.69□□□□□ -0.22
CARMIL3-204ENST00000561354 CD320Q9NPF0 282 aa13.69□□□□□ -0.22
CARMIL3-204ENST00000561354 HCN4Q9Y3Q4 1203 aa13.69□□□□□ -0.22
CARMIL3-204ENST00000561354 U3KPZ7 1027 aaPredicted RBP13.69□□□□□ -0.22
CARMIL3-204ENST00000561354 MICAL3Q7RTP6 2002 aa13.69□□□□□ -0.22
CARMIL3-204ENST00000561354 ERICH2A1L162 156 aa13.68□□□□□ -0.22
CARMIL3-204ENST00000561354 IFIT3O14879 490 aaKnown RBP13.68□□□□□ -0.22
CARMIL3-204ENST00000561354 CYP21A2P08686 494 aa13.68□□□□□ -0.22
CARMIL3-204ENST00000561354 GNAT1P11488 350 aa13.68□□□□□ -0.22
CARMIL3-204ENST00000561354 PTPROQ16827 1216 aa13.68□□□□□ -0.22
CARMIL3-204ENST00000561354 EPC2Q52LR7 807 aa13.68□□□□□ -0.22
CARMIL3-204ENST00000561354 FAM178BQ8IXR5 827 aa13.68□□□□□ -0.22
CARMIL3-204ENST00000561354 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.68□□□□□ -0.22
CARMIL3-204ENST00000561354 GPR20Q99678 358 aa13.68□□□□□ -0.22
CARMIL3-204ENST00000561354 BCAS3Q9H6U6 928 aa13.68□□□□□ -0.22
CARMIL3-204ENST00000561354 C11orf16Q9NQ32 467 aa13.68□□□□□ -0.22
CARMIL3-204ENST00000561354 COL4A6Q14031 1691 aa13.68□□□□□ -0.22
CARMIL3-204ENST00000561354 BRWD1Q9NSI6 2320 aa13.68□□□□□ -0.22
CARMIL3-204ENST00000561354 H3BNC9 293 aa13.67□□□□□ -0.22
CARMIL3-204ENST00000561354 FIBPO43427 364 aa13.67□□□□□ -0.22
CARMIL3-204ENST00000561354 KCNA5P22460 613 aa13.67□□□□□ -0.22
CARMIL3-204ENST00000561354 ADAM17P78536 824 aa13.67□□□□□ -0.22
CARMIL3-204ENST00000561354 WTAPQ15007 396 aa13.67□□□□□ -0.22
CARMIL3-204ENST00000561354 PUS10Q3MIT2 529 aaKnown RBP13.67□□□□□ -0.22
CARMIL3-204ENST00000561354 FAM26DQ5JW98 314 aa13.67□□□□□ -0.22
CARMIL3-204ENST00000561354 CYFIP1Q7L576 1253 aa13.67□□□□□ -0.22
CARMIL3-204ENST00000561354 RUFY2Q8WXA3 655 aa13.67□□□□□ -0.22
CARMIL3-204ENST00000561354 APBB2Q92870 758 aa13.67□□□□□ -0.22
CARMIL3-204ENST00000561354 YME1L1Q96TA2 773 aa13.67□□□□□ -0.22
CARMIL3-204ENST00000561354 SENP7Q9BQF6 1050 aa13.67□□□□□ -0.22
CARMIL3-204ENST00000561354 SENP2Q9HC62 589 aa13.67□□□□□ -0.22
CARMIL3-204ENST00000561354 SETD4Q9NVD3 440 aa13.67□□□□□ -0.22
CARMIL3-204ENST00000561354 ZNF215Q9UL58 517 aaPredicted RBP13.67□□□□□ -0.22
CARMIL3-204ENST00000561354 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.66□□□□□ -0.22
CARMIL3-204ENST00000561354 RBAK-RBAKDNI3L0D1 243 aa13.66□□□□□ -0.22
CARMIL3-204ENST00000561354 HOXD11P31277 338 aaPredicted RBP13.66□□□□□ -0.22
CARMIL3-204ENST00000561354 SEMA3FQ13275 785 aa13.66□□□□□ -0.22
CARMIL3-204ENST00000561354 SART3Q15020 963 aaKnown RBP13.66□□□□□ -0.22
CARMIL3-204ENST00000561354 TIGD5Q53EQ6 642 aa13.66□□□□□ -0.22
CARMIL3-204ENST00000561354 XRRA1Q6P2D8 792 aa13.66□□□□□ -0.22
CARMIL3-204ENST00000561354 RALYLQ86SE5 291 aaKnown RBP13.66□□□□□ -0.22
CARMIL3-204ENST00000561354 GJD3Q8N144 294 aa13.66□□□□□ -0.22
CARMIL3-204ENST00000561354 NCOA7Q8NI08 942 aa13.66□□□□□ -0.22
CARMIL3-204ENST00000561354 NEK9Q8TD19 979 aa13.66□□□□□ -0.22
CARMIL3-204ENST00000561354 MAP3K14Q99558 947 aa13.66□□□□□ -0.22
CARMIL3-204ENST00000561354 OSBPL7Q9BZF2 842 aa13.66□□□□□ -0.22
CARMIL3-204ENST00000561354 RTEL1Q9NZ71 1219 aa13.66□□□□□ -0.22
CARMIL3-204ENST00000561354 BAZ2BQ9UIF8 2168 aaKnown RBP13.66□□□□□ -0.22
CARMIL3-204ENST00000561354 GRXCR2A6NFK2 248 aa13.65□□□□□ -0.22
CARMIL3-204ENST00000561354 E7EWF7 191 aa13.65□□□□□ -0.22
CARMIL3-204ENST00000561354 PIK3CDO00329 1044 aa13.65□□□□□ -0.22
CARMIL3-204ENST00000561354 CTSHP09668 335 aa13.65□□□□□ -0.22
CARMIL3-204ENST00000561354 GSPT1P15170 499 aaKnown RBP13.65□□□□□ -0.22
CARMIL3-204ENST00000561354 IL9P15248 144 aa13.65□□□□□ -0.22
CARMIL3-204ENST00000561354 SMARCA1P28370 1054 aa13.65□□□□□ -0.22
CARMIL3-204ENST00000561354 PTH1RQ03431 593 aa13.65□□□□□ -0.22
CARMIL3-204ENST00000561354 GPM6BQ13491 265 aa13.65□□□□□ -0.22
CARMIL3-204ENST00000561354 COL19A1Q14993 1142 aa13.65□□□□□ -0.22
CARMIL3-204ENST00000561354 TTC22Q5TAA0 569 aa13.65□□□□□ -0.22
CARMIL3-204ENST00000561354 PCNX4Q63HM2 1172 aa13.65□□□□□ -0.22
CARMIL3-204ENST00000561354 PTCRAQ6ISU1 281 aaPredicted RBP13.65□□□□□ -0.22
CARMIL3-204ENST00000561354 CATIPQ7Z7H3 387 aa13.65□□□□□ -0.22
CARMIL3-204ENST00000561354 RPAINQ86UA6 219 aa13.65□□□□□ -0.22
CARMIL3-204ENST00000561354 TMEM192Q8IY95 271 aa13.65□□□□□ -0.22
CARMIL3-204ENST00000561354 GIMAP8Q8ND71 665 aaPredicted RBP13.65□□□□□ -0.22
CARMIL3-204ENST00000561354 BANK1Q8NDB2 785 aa13.65□□□□□ -0.22
CARMIL3-204ENST00000561354 EXOC6Q8TAG9 804 aa13.65□□□□□ -0.22
CARMIL3-204ENST00000561354 LMBR1Q8WVP7 490 aa13.65□□□□□ -0.22
CARMIL3-204ENST00000561354 SUPT16HQ9Y5B9 1047 aaKnown RBP13.65□□□□□ -0.22
CARMIL3-204ENST00000561354 NRCAMQ92823 1304 aa13.64□□□□□ -0.23
CARMIL3-204ENST00000561354 UPP2O95045 317 aa13.64□□□□□ -0.23
CARMIL3-204ENST00000561354 ERICH6BQ5W0A0 696 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms