RNA–Protein interactions for RNA: ENST00000561061.5

ZEB1-221, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 970 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-221ENST00000561061 IFNL3Q8IZI9 196 aa7.88□□□□□ -1.15
ZEB1-221ENST00000561061 LRRCC1Q9C099 1032 aa7.88□□□□□ -1.15
ZEB1-221ENST00000561061 FTOQ9C0B1 505 aaKnown RBP eCLIP7.88□□□□□ -1.15
ZEB1-221ENST00000561061 RANBP17Q9H2T7 1088 aaKnown RBP7.88□□□□□ -1.15
ZEB1-221ENST00000561061 ECHDC1Q9NTX5 307 aa7.88□□□□□ -1.15
ZEB1-221ENST00000561061 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.88□□□□□ -1.15
ZEB1-221ENST00000561061 MYH9P35579 1960 aaKnown RBP7.88□□□□□ -1.15
ZEB1-221ENST00000561061 RAD50Q92878 1312 aa7.87□□□□□ -1.15
ZEB1-221ENST00000561061 A6NJR5 290 aa7.87□□□□□ -1.15
ZEB1-221ENST00000561061 PATL2C9JE40 543 aaKnown RBP7.87□□□□□ -1.15
ZEB1-221ENST00000561061 NFIBO00712 420 aa7.87□□□□□ -1.15
ZEB1-221ENST00000561061 ZBTB24O43167 697 aaPredicted RBP7.87□□□□□ -1.15
ZEB1-221ENST00000561061 APPP05067 770 aa7.87□□□□□ -1.15
ZEB1-221ENST00000561061 ZFYP08048 801 aaPredicted RBP7.87□□□□□ -1.15
ZEB1-221ENST00000561061 DEFB103AP81534 67 aa7.87□□□□□ -1.15
ZEB1-221ENST00000561061 HNRNPUQ00839 825 aaKnown RBP eCLIP7.87□□□□□ -1.15
ZEB1-221ENST00000561061 PTPN11Q06124 597 aaPredicted RBP7.87□□□□□ -1.15
ZEB1-221ENST00000561061 PPARAQ07869 468 aa7.87□□□□□ -1.15
ZEB1-221ENST00000561061 BFSP2Q13515 415 aa7.87□□□□□ -1.15
ZEB1-221ENST00000561061 BAATQ14032 418 aaPredicted RBP7.87□□□□□ -1.15
ZEB1-221ENST00000561061 PPP2R5BQ15173 497 aa7.87□□□□□ -1.15
ZEB1-221ENST00000561061 TPRNQ4KMQ1 711 aa7.87□□□□□ -1.15
ZEB1-221ENST00000561061 TSHZ3Q63HK5 1081 aa7.87□□□□□ -1.15
ZEB1-221ENST00000561061 PTCRAQ6ISU1 281 aaPredicted RBP7.87□□□□□ -1.15
ZEB1-221ENST00000561061 TMCO2Q7Z6W1 182 aaPredicted RBP7.87□□□□□ -1.15
ZEB1-221ENST00000561061 RETREG2Q8NC44 543 aa7.87□□□□□ -1.15
ZEB1-221ENST00000561061 COPS5Q92905 334 aa7.87□□□□□ -1.15
ZEB1-221ENST00000561061 CTAGE1Q96RT6 745 aa7.87□□□□□ -1.15
ZEB1-221ENST00000561061 UBE2ZQ9H832 354 aaPredicted RBP7.87□□□□□ -1.15
ZEB1-221ENST00000561061 LMCD1Q9NZU5 365 aa7.87□□□□□ -1.15
ZEB1-221ENST00000561061 ADD3Q9UEY8 706 aaKnown RBP7.87□□□□□ -1.15
ZEB1-221ENST00000561061 STX8Q9UNK0 236 aa7.87□□□□□ -1.15
ZEB1-221ENST00000561061 PLXNA3P51805 1871 aa7.87□□□□□ -1.15
ZEB1-221ENST00000561061 VPS13AQ96RL7 3174 aa7.86□□□□□ -1.15
ZEB1-221ENST00000561061 PTPDC1A2A3K4 754 aa7.86□□□□□ -1.15
ZEB1-221ENST00000561061 PRR33A8MZF0 331 aa7.86□□□□□ -1.15
ZEB1-221ENST00000561061 NKRFO15226 690 aaKnown RBP eCLIP7.86□□□□□ -1.151e-6■■■□□ 17.3
ZEB1-221ENST00000561061 NMT2O60551 498 aa7.86□□□□□ -1.15
ZEB1-221ENST00000561061 CD2BP2O95400 341 aaKnown RBP7.86□□□□□ -1.15
ZEB1-221ENST00000561061 SLC3A2P08195 630 aaKnown RBP7.86□□□□□ -1.15
ZEB1-221ENST00000561061 EDNRBP24530 442 aa7.86□□□□□ -1.15
ZEB1-221ENST00000561061 CLK2P49760 499 aaKnown RBP7.86□□□□□ -1.15
ZEB1-221ENST00000561061 RBL2Q08999 1139 aa7.86□□□□□ -1.15
ZEB1-221ENST00000561061 GPNMBQ14956 572 aa7.86□□□□□ -1.15
ZEB1-221ENST00000561061 CCDC96Q2M329 555 aa7.86□□□□□ -1.15
ZEB1-221ENST00000561061 TCTN1Q2MV58 587 aa7.86□□□□□ -1.15
ZEB1-221ENST00000561061 LRRFIP1Q32MZ4 808 aaKnown RBP7.86□□□□□ -1.15
ZEB1-221ENST00000561061 BRDTQ58F21 947 aaPredicted RBP7.86□□□□□ -1.15
ZEB1-221ENST00000561061 ALYREFQ86V81 257 aaKnown RBP7.86□□□□□ -1.15
ZEB1-221ENST00000561061 FAM178BQ8IXR5 827 aa7.86□□□□□ -1.15
ZEB1-221ENST00000561061 CCDC155Q8N6L0 562 aa7.86□□□□□ -1.15
ZEB1-221ENST00000561061 CAGE1Q8TC20 777 aa7.86□□□□□ -1.15
ZEB1-221ENST00000561061 AFAP1L1Q8TED9 768 aa7.86□□□□□ -1.15
ZEB1-221ENST00000561061 SCFD2Q8WU76 684 aa7.86□□□□□ -1.15
ZEB1-221ENST00000561061 DCAF4Q8WV16 495 aa7.86□□□□□ -1.15
ZEB1-221ENST00000561061 DHX38Q92620 1227 aaKnown RBP7.86□□□□□ -1.15
ZEB1-221ENST00000561061 SEC62Q99442 399 aaKnown RBP7.86□□□□□ -1.15
ZEB1-221ENST00000561061 NACAP1Q9BZK3 213 aa7.86□□□□□ -1.15
ZEB1-221ENST00000561061 NAPBQ9H115 298 aa7.86□□□□□ -1.15
ZEB1-221ENST00000561061 IL17RBQ9NRM6 502 aa7.86□□□□□ -1.15
ZEB1-221ENST00000561061 MTMR7Q9Y216 660 aa7.86□□□□□ -1.15
ZEB1-221ENST00000561061 NOD1Q9Y239 953 aa7.86□□□□□ -1.15
ZEB1-221ENST00000561061 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.85□□□□□ -1.15
ZEB1-221ENST00000561061 LINC01553A4QN01 128 aa7.85□□□□□ -1.15
ZEB1-221ENST00000561061 TSPY2A6NKD2 308 aa7.85□□□□□ -1.15
ZEB1-221ENST00000561061 FOXP2O15409 715 aa7.85□□□□□ -1.15
ZEB1-221ENST00000561061 KPNA6O60684 536 aa7.85□□□□□ -1.15
ZEB1-221ENST00000561061 ARIH2O95376 493 aa7.85□□□□□ -1.15
ZEB1-221ENST00000561061 GJB5O95377 273 aa7.85□□□□□ -1.15
ZEB1-221ENST00000561061 CXCL10P02778 98 aa7.85□□□□□ -1.15
ZEB1-221ENST00000561061 CCNYL3P0C7X3 344 aa7.85□□□□□ -1.15
ZEB1-221ENST00000561061 SELPP16109 830 aa7.85□□□□□ -1.15
ZEB1-221ENST00000561061 CALML3P27482 149 aa7.85□□□□□ -1.15
ZEB1-221ENST00000561061 SLC16A2P36021 539 aa7.85□□□□□ -1.15
ZEB1-221ENST00000561061 NOVP48745 357 aa7.85□□□□□ -1.15
ZEB1-221ENST00000561061 ERVK-21P61565 698 aa7.85□□□□□ -1.15
ZEB1-221ENST00000561061 CTDSPL2Q05D32 466 aa7.85□□□□□ -1.15
ZEB1-221ENST00000561061 PTGISQ16647 500 aa7.85□□□□□ -1.15
ZEB1-221ENST00000561061 PTPRNQ16849 979 aa7.85□□□□□ -1.15
ZEB1-221ENST00000561061 LEXMQ3ZCV2 418 aa7.85□□□□□ -1.15
ZEB1-221ENST00000561061 ZMYM1Q5SVZ6 1142 aa7.85□□□□□ -1.15
ZEB1-221ENST00000561061 SYDE2Q5VT97 1194 aa7.85□□□□□ -1.15
ZEB1-221ENST00000561061 TTBK2Q6IQ55 1244 aa7.85□□□□□ -1.15
ZEB1-221ENST00000561061 GDF6Q6KF10 455 aaPredicted RBP7.85□□□□□ -1.15
ZEB1-221ENST00000561061 CNKSR3Q6P9H4 555 aa7.85□□□□□ -1.15
ZEB1-221ENST00000561061 BTNL9Q6UXG8 535 aa7.85□□□□□ -1.15
ZEB1-221ENST00000561061 LRRC8DQ7L1W4 858 aa7.85□□□□□ -1.15
ZEB1-221ENST00000561061 SESTD1Q86VW0 696 aa7.85□□□□□ -1.15
ZEB1-221ENST00000561061 CLEC4DQ8WXI8 215 aa7.85□□□□□ -1.15
ZEB1-221ENST00000561061 GPATCH3Q96I76 525 aa7.85□□□□□ -1.15
ZEB1-221ENST00000561061 TGS1Q96RS0 853 aaKnown RBP7.85□□□□□ -1.15
ZEB1-221ENST00000561061 INCENPQ9NQS7 918 aa7.85□□□□□ -1.15
ZEB1-221ENST00000561061 MTUS1Q9ULD2 1270 aa7.85□□□□□ -1.15
ZEB1-221ENST00000561061 WDR87Q6ZQQ6 2873 aa7.85□□□□□ -1.15
ZEB1-221ENST00000561061 MYO15AQ9UKN7 3530 aa7.85□□□□□ -1.15
ZEB1-221ENST00000561061 DMDP11532 3685 aa7.84□□□□□ -1.15
ZEB1-221ENST00000561061 RBAK-RBAKDNI3L0D1 243 aa7.84□□□□□ -1.15
ZEB1-221ENST00000561061 NBNO60934 754 aa7.84□□□□□ -1.15
ZEB1-221ENST00000561061 LILRB3O75022 631 aa7.84□□□□□ -1.15
ZEB1-221ENST00000561061 MMP3P08254 477 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms