RNA–Protein interactions for RNA: ENST00000558890.5

LRRC28-211, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 978 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-211ENST00000558890 HMGCRP04035 888 aa8.66□□□□□ -1.02
LRRC28-211ENST00000558890 UQCRHP07919 91 aa8.66□□□□□ -1.02
LRRC28-211ENST00000558890 POLR2MP0CAP2 368 aa8.66□□□□□ -1.02
LRRC28-211ENST00000558890 CCL5P13501 91 aa8.66□□□□□ -1.02
LRRC28-211ENST00000558890 GCFC2P16383 781 aaKnown RBP8.66□□□□□ -1.02
LRRC28-211ENST00000558890 KRT2P35908 639 aa8.66□□□□□ -1.02
LRRC28-211ENST00000558890 NLRP5P59047 1200 aa8.66□□□□□ -1.02
LRRC28-211ENST00000558890 KCTD2Q14681 263 aa8.66□□□□□ -1.02
LRRC28-211ENST00000558890 RESP18Q5W5W9 173 aa8.66□□□□□ -1.02
LRRC28-211ENST00000558890 TYW1BQ6NUM6 668 aa8.66□□□□□ -1.02
LRRC28-211ENST00000558890 RNF207Q6ZRF8 634 aa8.66□□□□□ -1.02
LRRC28-211ENST00000558890 CCDC186Q7Z3E2 898 aa8.66□□□□□ -1.02
LRRC28-211ENST00000558890 BLIDQ8IZY5 108 aa8.66□□□□□ -1.02
LRRC28-211ENST00000558890 CMTR1Q8N1G2 835 aaKnown RBP8.66□□□□□ -1.02
LRRC28-211ENST00000558890 CCDC82Q8N4S0 544 aa8.66□□□□□ -1.02
LRRC28-211ENST00000558890 KIAA1524Q8TCG1 905 aa8.66□□□□□ -1.02
LRRC28-211ENST00000558890 TNFRSF25Q93038 417 aa8.66□□□□□ -1.02
LRRC28-211ENST00000558890 SHISA4Q96DD7 197 aa8.66□□□□□ -1.02
LRRC28-211ENST00000558890 PURBQ96QR8 312 aaKnown RBP8.66□□□□□ -1.02
LRRC28-211ENST00000558890 IWS1Q96ST2 819 aa8.66□□□□□ -1.02
LRRC28-211ENST00000558890 MMP19Q99542 508 aa8.66□□□□□ -1.02
LRRC28-211ENST00000558890 CRISPLD2Q9H0B8 497 aa8.66□□□□□ -1.02
LRRC28-211ENST00000558890 VAT1LQ9HCJ6 419 aa8.66□□□□□ -1.02
LRRC28-211ENST00000558890 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.66□□□□□ -1.02
LRRC28-211ENST00000558890 NRBP1Q9UHY1 535 aa8.66□□□□□ -1.02
LRRC28-211ENST00000558890 IVNS1ABPQ9Y6Y0 642 aa8.66□□□□□ -1.02
LRRC28-211ENST00000558890 TNRC18O15417 2968 aaPredicted RBP8.66□□□□□ -1.02
LRRC28-211ENST00000558890 MYH7BA7E2Y1 1941 aa8.65□□□□□ -1.02
LRRC28-211ENST00000558890 KIAA1217Q5T5P2 1943 aa8.65□□□□□ -1.02
LRRC28-211ENST00000558890 CCDC85CA6NKD9 419 aa8.65□□□□□ -1.02
LRRC28-211ENST00000558890 SPDYE3A6NKU9 549 aa8.65□□□□□ -1.02
LRRC28-211ENST00000558890 MEIS2O14770 477 aa8.65□□□□□ -1.02
LRRC28-211ENST00000558890 GJB1P08034 283 aa8.65□□□□□ -1.02
LRRC28-211ENST00000558890 CYP3A4P08684 503 aa8.65□□□□□ -1.02
LRRC28-211ENST00000558890 ZNF865P0CJ78 1059 aaPredicted RBP8.65□□□□□ -1.02
LRRC28-211ENST00000558890 ALAS1P13196 640 aa8.65□□□□□ -1.02
LRRC28-211ENST00000558890 CYBAP13498 195 aa8.65□□□□□ -1.02
LRRC28-211ENST00000558890 CYP2C19P33261 490 aa8.65□□□□□ -1.02
LRRC28-211ENST00000558890 SREBF1P36956 1147 aa8.65□□□□□ -1.02
LRRC28-211ENST00000558890 USP11P51784 963 aa8.65□□□□□ -1.02
LRRC28-211ENST00000558890 GSDMDP57764 484 aa8.65□□□□□ -1.02
LRRC28-211ENST00000558890 BAATQ14032 418 aaPredicted RBP8.65□□□□□ -1.02
LRRC28-211ENST00000558890 USH1GQ495M9 461 aa8.65□□□□□ -1.02
LRRC28-211ENST00000558890 PRAMEF19Q5SWL8 479 aa8.65□□□□□ -1.02
LRRC28-211ENST00000558890 SHC4Q6S5L8 630 aa8.65□□□□□ -1.02
LRRC28-211ENST00000558890 NIPA1Q7RTP0 329 aa8.65□□□□□ -1.02
LRRC28-211ENST00000558890 DPP9Q86TI2 863 aa8.65□□□□□ -1.02
LRRC28-211ENST00000558890 DHX40Q8IX18 779 aaKnown RBP8.65□□□□□ -1.02
LRRC28-211ENST00000558890 CNNM3Q8NE01 707 aa8.65□□□□□ -1.02
LRRC28-211ENST00000558890 CRYGNQ8WXF5 182 aa8.65□□□□□ -1.02
LRRC28-211ENST00000558890 GPKOWQ92917 476 aaPredicted RBP eCLIP8.65□□□□□ -1.02
LRRC28-211ENST00000558890 TINF2Q9BSI4 451 aa8.65□□□□□ -1.02
LRRC28-211ENST00000558890 KCNF1Q9H3M0 494 aa8.65□□□□□ -1.02
LRRC28-211ENST00000558890 VPS54Q9P1Q0 977 aa8.65□□□□□ -1.02
LRRC28-211ENST00000558890 DACH1Q9UI36 760 aa8.65□□□□□ -1.02
LRRC28-211ENST00000558890 KCNJ14Q9UNX9 436 aa8.65□□□□□ -1.02
LRRC28-211ENST00000558890 HPSEQ9Y251 543 aa8.65□□□□□ -1.02
LRRC28-211ENST00000558890 SYNGAP1Q96PV0 1343 aa8.64□□□□□ -1.03
LRRC28-211ENST00000558890 BTBD18B2RXH4 712 aa8.64□□□□□ -1.03
LRRC28-211ENST00000558890 LAD1O00515 517 aa8.64□□□□□ -1.03
LRRC28-211ENST00000558890 IKBKBO14920 756 aa8.64□□□□□ -1.03
LRRC28-211ENST00000558890 MAFGO15525 162 aa8.64□□□□□ -1.03
LRRC28-211ENST00000558890 CBFA2T2O43439 604 aa8.64□□□□□ -1.03
LRRC28-211ENST00000558890 SMC2O95347 1197 aa8.64□□□□□ -1.03
LRRC28-211ENST00000558890 SGPL1O95470 568 aa8.64□□□□□ -1.03
LRRC28-211ENST00000558890 CAPN2P17655 700 aa8.64□□□□□ -1.03
LRRC28-211ENST00000558890 EN2P19622 333 aaPredicted RBP8.64□□□□□ -1.03
LRRC28-211ENST00000558890 EDNRBP24530 442 aa8.64□□□□□ -1.03
LRRC28-211ENST00000558890 CCND3P30281 292 aaPredicted RBP8.64□□□□□ -1.03
LRRC28-211ENST00000558890 CIITAP33076 1130 aa8.64□□□□□ -1.03
LRRC28-211ENST00000558890 GJA8P48165 433 aa8.64□□□□□ -1.03
LRRC28-211ENST00000558890 RPS6P62753 249 aaKnown RBP8.64□□□□□ -1.03
LRRC28-211ENST00000558890 NONOQ15233 471 aaKnown RBP eCLIP8.64□□□□□ -1.03
LRRC28-211ENST00000558890 DPCR1Q3MIW9 517 aa8.64□□□□□ -1.03
LRRC28-211ENST00000558890 WDR78Q5VTH9 848 aa8.64□□□□□ -1.03
LRRC28-211ENST00000558890 PCNX4Q63HM2 1172 aa8.64□□□□□ -1.03
LRRC28-211ENST00000558890 KANK3Q6NY19 840 aa8.64□□□□□ -1.03
LRRC28-211ENST00000558890 KRBA2Q6ZNG9 492 aa8.64□□□□□ -1.03
LRRC28-211ENST00000558890 ELOA2Q8IYF1 753 aaPredicted RBP8.64□□□□□ -1.03
LRRC28-211ENST00000558890 ZNF579Q8NAF0 562 aaKnown RBP8.64□□□□□ -1.03
LRRC28-211ENST00000558890 CCDC150Q8NCX0 1101 aa8.64□□□□□ -1.03
LRRC28-211ENST00000558890 SYTL5Q8TDW5 730 aaPredicted RBP8.64□□□□□ -1.03
LRRC28-211ENST00000558890 NSUN6Q8TEA1 469 aaKnown RBP8.64□□□□□ -1.03
LRRC28-211ENST00000558890 HOMER2Q9NSB8 354 aa8.64□□□□□ -1.03
LRRC28-211ENST00000558890 COL20A1Q9P218 1284 aa8.64□□□□□ -1.03
LRRC28-211ENST00000558890 IMPACTQ9P2X3 320 aa8.64□□□□□ -1.03
LRRC28-211ENST00000558890 TUBE1Q9UJT0 475 aa8.64□□□□□ -1.03
LRRC28-211ENST00000558890 KCNH3Q9ULD8 1083 aa8.64□□□□□ -1.03
LRRC28-211ENST00000558890 PYCARDQ9ULZ3 195 aa8.64□□□□□ -1.03
LRRC28-211ENST00000558890 FARP1Q9Y4F1 1045 aaPredicted RBP8.64□□□□□ -1.03
LRRC28-211ENST00000558890 TCHHQ07283 1943 aa8.64□□□□□ -1.03
LRRC28-211ENST00000558890 RANBP2P49792 3224 aaKnown RBP8.63□□□□□ -1.03
LRRC28-211ENST00000558890 CYP3A7-CYP3A51PA0A087WV96 503 aa8.63□□□□□ -1.03
LRRC28-211ENST00000558890 CCDC194A0A1B0GVG4 234 aa8.63□□□□□ -1.03
LRRC28-211ENST00000558890 ASB14A6NK59 587 aa8.63□□□□□ -1.03
LRRC28-211ENST00000558890 BIN1O00499 593 aa8.63□□□□□ -1.03
LRRC28-211ENST00000558890 DYNC1I1O14576 645 aa8.63□□□□□ -1.03
LRRC28-211ENST00000558890 TBX3O15119 743 aa8.63□□□□□ -1.03
LRRC28-211ENST00000558890 ADCY6O43306 1168 aa8.63□□□□□ -1.03
LRRC28-211ENST00000558890 CYP3A7P24462 503 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms