RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 SGPL1O95470 568 aa8.63□□□□□ -1.03
TDP1-214ENST00000556063 BRD1O95696 1058 aa8.63□□□□□ -1.03
TDP1-214ENST00000556063 TFRCP02786 760 aaKnown RBP8.63□□□□□ -1.03
TDP1-214ENST00000556063 MYCNP04198 464 aaPredicted RBP8.63□□□□□ -1.03
TDP1-214ENST00000556063 OR52Z1P0C646 297 aa8.63□□□□□ -1.03
TDP1-214ENST00000556063 C6orf222P0C671 652 aaPredicted RBP8.63□□□□□ -1.03
TDP1-214ENST00000556063 KCNA2P16389 499 aa8.63□□□□□ -1.03
TDP1-214ENST00000556063 UBA1P22314 1058 aaKnown RBP8.63□□□□□ -1.03
TDP1-214ENST00000556063 FXR2P51116 673 aaKnown RBP eCLIP8.63□□□□□ -1.03
TDP1-214ENST00000556063 GJA9P57773 515 aa8.63□□□□□ -1.03
TDP1-214ENST00000556063 KRT76Q01546 638 aa8.63□□□□□ -1.03
TDP1-214ENST00000556063 LY6KQ17RY6 165 aa8.63□□□□□ -1.03
TDP1-214ENST00000556063 TMEM266Q2M3C6 531 aa8.63□□□□□ -1.03
TDP1-214ENST00000556063 LRCH2Q5VUJ6 765 aa8.63□□□□□ -1.03
TDP1-214ENST00000556063 FOXD4L5Q5VV16 416 aaPredicted RBP8.63□□□□□ -1.03
TDP1-214ENST00000556063 PCSK9Q8NBP7 692 aaKnown RBP8.63□□□□□ -1.03
TDP1-214ENST00000556063 U2AF1L4Q8WU68 220 aaKnown RBP8.63□□□□□ -1.03
TDP1-214ENST00000556063 FOXD4L4Q8WXT5 416 aaPredicted RBP8.63□□□□□ -1.03
TDP1-214ENST00000556063 SPATA33Q96N06 139 aa8.63□□□□□ -1.03
TDP1-214ENST00000556063 TEKT3Q9BXF9 490 aa8.63□□□□□ -1.03
TDP1-214ENST00000556063 RAB34Q9BZG1 259 aa8.63□□□□□ -1.03
TDP1-214ENST00000556063 UPF3AQ9H1J1 476 aaKnown RBP8.63□□□□□ -1.03
TDP1-214ENST00000556063 JPH1Q9HDC5 661 aaPredicted RBP8.63□□□□□ -1.03
TDP1-214ENST00000556063 CHMP5Q9NZZ3 219 aa8.63□□□□□ -1.03
TDP1-214ENST00000556063 PKD2L1Q9P0L9 805 aa8.63□□□□□ -1.03
TDP1-214ENST00000556063 SLC9A2Q9UBY0 812 aa8.63□□□□□ -1.03
TDP1-214ENST00000556063 CFAP45Q9UL16 551 aa8.63□□□□□ -1.03
TDP1-214ENST00000556063 GNEQ9Y223 722 aaKnown RBP8.63□□□□□ -1.03
TDP1-214ENST00000556063 KBTBD13C9JR72 458 aa8.62□□□□□ -1.03
TDP1-214ENST00000556063 PITPNM1O00562 1244 aa8.62□□□□□ -1.03
TDP1-214ENST00000556063 SLC37A4O43826 429 aa8.62□□□□□ -1.03
TDP1-214ENST00000556063 EDIL3O43854 480 aa8.62□□□□□ -1.03
TDP1-214ENST00000556063 PPFIA4O75335 1185 aa8.62□□□□□ -1.03
TDP1-214ENST00000556063 FARP2O94887 1054 aaPredicted RBP8.62□□□□□ -1.03
TDP1-214ENST00000556063 SFNP31947 248 aa8.62□□□□□ -1.03
TDP1-214ENST00000556063 GJA8P48165 433 aa8.62□□□□□ -1.03
TDP1-214ENST00000556063 TOB1P50616 345 aaPredicted RBP8.62□□□□□ -1.03
TDP1-214ENST00000556063 JAK3P52333 1124 aa8.62□□□□□ -1.03
TDP1-214ENST00000556063 NKX3-2P78367 333 aa8.62□□□□□ -1.03
TDP1-214ENST00000556063 ARHGAP1Q07960 439 aa8.62□□□□□ -1.03
TDP1-214ENST00000556063 PTGDRQ13258 359 aa8.62□□□□□ -1.03
TDP1-214ENST00000556063 SEMA3FQ13275 785 aa8.62□□□□□ -1.03
TDP1-214ENST00000556063 FSCN1Q16658 493 aaKnown RBP8.62□□□□□ -1.03
TDP1-214ENST00000556063 DGKDQ16760 1214 aa8.62□□□□□ -1.03
TDP1-214ENST00000556063 GNASQ5JWF2 1037 aa8.62□□□□□ -1.03
TDP1-214ENST00000556063 ANO1Q5XXA6 986 aa8.62□□□□□ -1.03
TDP1-214ENST00000556063 ZNF746Q6NUN9 644 aaPredicted RBP8.62□□□□□ -1.03
TDP1-214ENST00000556063 MIS18BP1Q6P0N0 1132 aa8.62□□□□□ -1.03
TDP1-214ENST00000556063 CYFIP1Q7L576 1253 aa8.62□□□□□ -1.03
TDP1-214ENST00000556063 SMAP1Q8IYB5 467 aaPredicted RBP8.62□□□□□ -1.03
TDP1-214ENST00000556063 ANKLE1Q8NAG6 615 aa8.62□□□□□ -1.03
TDP1-214ENST00000556063 RDM1Q8NG50 284 aa8.62□□□□□ -1.03
TDP1-214ENST00000556063 PPTC7Q8NI37 304 aa8.62□□□□□ -1.03
TDP1-214ENST00000556063 AFG1LQ8WV93 481 aa8.62□□□□□ -1.03
TDP1-214ENST00000556063 SEPT1Q8WYJ6 367 aa8.62□□□□□ -1.03
TDP1-214ENST00000556063 SLC5A5Q92911 643 aa8.62□□□□□ -1.03
TDP1-214ENST00000556063 LENG9Q96B70 501 aa8.62□□□□□ -1.03
TDP1-214ENST00000556063 ABHD8Q96I13 439 aa8.62□□□□□ -1.03
TDP1-214ENST00000556063 TSEN34Q9BSV6 310 aaKnown RBP8.62□□□□□ -1.03
TDP1-214ENST00000556063 KCNMB3Q9NPA1 279 aa8.62□□□□□ -1.03
TDP1-214ENST00000556063 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.62□□□□□ -1.03
TDP1-214ENST00000556063 POLR3EQ9NVU0 708 aa8.62□□□□□ -1.03
TDP1-214ENST00000556063 OGDHLQ9ULD0 1010 aa8.62□□□□□ -1.03
TDP1-214ENST00000556063 PCDHA12Q9UN75 941 aa8.62□□□□□ -1.03
TDP1-214ENST00000556063 PCDHB6Q9Y5E3 794 aa8.62□□□□□ -1.03
TDP1-214ENST00000556063 STK24Q9Y6E0 443 aa8.62□□□□□ -1.03
TDP1-214ENST00000556063 SYNRGQ9UMZ2 1314 aa8.61□□□□□ -1.03
TDP1-214ENST00000556063 MYH9P35579 1960 aaKnown RBP8.61□□□□□ -1.03
TDP1-214ENST00000556063 A6NJR5 290 aa8.61□□□□□ -1.03
TDP1-214ENST00000556063 WDR64B1ANS9 1081 aa8.61□□□□□ -1.03
TDP1-214ENST00000556063 DDX39AO00148 427 aaKnown RBP8.61□□□□□ -1.03
TDP1-214ENST00000556063 DNM1LO00429 736 aa8.61□□□□□ -1.03
TDP1-214ENST00000556063 DKC1O60832 514 aaKnown RBP eCLIP8.61□□□□□ -1.03
TDP1-214ENST00000556063 ATP9AO75110 1047 aa8.61□□□□□ -1.03
TDP1-214ENST00000556063 CABYRO75952 493 aa8.61□□□□□ -1.03
TDP1-214ENST00000556063 PGK1P00558 417 aa8.61□□□□□ -1.03
TDP1-214ENST00000556063 CST5P28325 142 aaPredicted RBP8.61□□□□□ -1.03
TDP1-214ENST00000556063 PRPHP41219 470 aa8.61□□□□□ -1.03
TDP1-214ENST00000556063 TXKP42681 527 aa8.61□□□□□ -1.03
TDP1-214ENST00000556063 KRT85P78386 507 aa8.61□□□□□ -1.03
TDP1-214ENST00000556063 SP2Q02086 613 aa8.61□□□□□ -1.03
TDP1-214ENST00000556063 SP4Q02446 784 aa8.61□□□□□ -1.03
TDP1-214ENST00000556063 PKP1Q13835 747 aa8.61□□□□□ -1.03
TDP1-214ENST00000556063 STK38Q15208 465 aa8.61□□□□□ -1.03
TDP1-214ENST00000556063 SF3A1Q15459 793 aaKnown RBP8.61□□□□□ -1.03
TDP1-214ENST00000556063 GJC2Q5T442 439 aaPredicted RBP8.61□□□□□ -1.03
TDP1-214ENST00000556063 ARL6IP4Q66PJ3 421 aaKnown RBP8.61□□□□□ -1.03
TDP1-214ENST00000556063 LHX8Q68G74 356 aa8.61□□□□□ -1.03
TDP1-214ENST00000556063 DTHD1Q6ZMT9 781 aa8.61□□□□□ -1.03
TDP1-214ENST00000556063 ERMNQ8TAM6 284 aa8.61□□□□□ -1.03
TDP1-214ENST00000556063 ETNPPLQ8TBG4 499 aa8.61□□□□□ -1.03
TDP1-214ENST00000556063 COPS5Q92905 334 aa8.61□□□□□ -1.03
TDP1-214ENST00000556063 TNPO1Q92973 898 aaKnown RBP8.61□□□□□ -1.03
TDP1-214ENST00000556063 LENG1Q96BZ8 264 aaPredicted RBP8.61□□□□□ -1.03
TDP1-214ENST00000556063 CRISPLD2Q9H0B8 497 aa8.61□□□□□ -1.03
TDP1-214ENST00000556063 AZI2Q9H6S1 392 aa8.61□□□□□ -1.03
TDP1-214ENST00000556063 TTC12Q9H892 705 aaPredicted RBP8.61□□□□□ -1.03
TDP1-214ENST00000556063 SAMM50Q9Y512 469 aa8.61□□□□□ -1.03
TDP1-214ENST00000556063 KAT6AQ92794 2004 aa8.61□□□□□ -1.03
TDP1-214ENST00000556063 ELP1O95163 1332 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms