RNA–Protein interactions for RNA: ENST00000554685.2

SHOX2-206, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-206ENST00000554685 GOLPH3LQ9H4A5 285 aa16.17■□□□□ 0.18
SHOX2-206ENST00000554685 LCTP09848 1927 aa16.17■□□□□ 0.18
SHOX2-206ENST00000554685 GPR25O00155 361 aa16.16■□□□□ 0.18
SHOX2-206ENST00000554685 GNRH1P01148 92 aa16.16■□□□□ 0.18
SHOX2-206ENST00000554685 KRT76Q01546 638 aa16.16■□□□□ 0.18
SHOX2-206ENST00000554685 OLFML2BQ68BL8 750 aa16.16■□□□□ 0.18
SHOX2-206ENST00000554685 NCAPH2Q6IBW4 605 aa16.16■□□□□ 0.18
SHOX2-206ENST00000554685 SEPT14Q6ZU15 432 aa16.16■□□□□ 0.18
SHOX2-206ENST00000554685 TRMT44Q8IYL2 757 aaKnown RBP16.16■□□□□ 0.18
SHOX2-206ENST00000554685 FMR1NBQ8N0W7 255 aaPredicted RBP16.16■□□□□ 0.18
SHOX2-206ENST00000554685 KCTD17Q8N5Z5 321 aa16.16■□□□□ 0.18
SHOX2-206ENST00000554685 ENGASEQ8NFI3 743 aa16.16■□□□□ 0.18
SHOX2-206ENST00000554685 RDM1Q8NG50 284 aa16.16■□□□□ 0.18
SHOX2-206ENST00000554685 NEK9Q8TD19 979 aa16.16■□□□□ 0.18
SHOX2-206ENST00000554685 ERO1AQ96HE7 468 aa16.16■□□□□ 0.18
SHOX2-206ENST00000554685 EPSTI1Q96J88 318 aa16.16■□□□□ 0.18
SHOX2-206ENST00000554685 CDK5RAP3Q96JB5 506 aa16.16■□□□□ 0.18
SHOX2-206ENST00000554685 TIGD1Q96MW7 591 aa16.16■□□□□ 0.18
SHOX2-206ENST00000554685 TINF2Q9BSI4 451 aa16.16■□□□□ 0.18
SHOX2-206ENST00000554685 NT5C3AQ9H0P0 336 aa16.16■□□□□ 0.18
SHOX2-206ENST00000554685 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.16■□□□□ 0.18
SHOX2-206ENST00000554685 DACT1Q9NYF0 836 aa16.16■□□□□ 0.18
SHOX2-206ENST00000554685 HOOK1Q9UJC3 728 aaKnown RBP16.16■□□□□ 0.18
SHOX2-206ENST00000554685 VAV3Q9UKW4 847 aa16.16■□□□□ 0.18
SHOX2-206ENST00000554685 POTEMA6NI47 508 aa16.15■□□□□ 0.18
SHOX2-206ENST00000554685 NR1I2O75469 434 aa16.15■□□□□ 0.18
SHOX2-206ENST00000554685 RGS20O76081 388 aa16.15■□□□□ 0.18
SHOX2-206ENST00000554685 XRCC5P13010 732 aaKnown RBP16.15■□□□□ 0.18
SHOX2-206ENST00000554685 SFNP31947 248 aa16.15■□□□□ 0.18
SHOX2-206ENST00000554685 SPIRE1Q08AE8 756 aa16.15■□□□□ 0.18
SHOX2-206ENST00000554685 NEDD9Q14511 834 aa16.15■□□□□ 0.18
SHOX2-206ENST00000554685 CCDC183Q5T5S1 534 aa16.15■□□□□ 0.18
SHOX2-206ENST00000554685 OTOP1Q7RTM1 612 aa16.15■□□□□ 0.18
SHOX2-206ENST00000554685 IQUBQ8NA54 791 aa16.15■□□□□ 0.18
SHOX2-206ENST00000554685 NPLOC4Q8TAT6 608 aa16.15■□□□□ 0.18
SHOX2-206ENST00000554685 SNX29Q8TEQ0 813 aa16.15■□□□□ 0.18
SHOX2-206ENST00000554685 SCFD2Q8WU76 684 aa16.15■□□□□ 0.18
SHOX2-206ENST00000554685 ABHD16BQ9H3Z7 469 aa16.15■□□□□ 0.18
SHOX2-206ENST00000554685 CUEDC2Q9H467 287 aa16.15■□□□□ 0.18
SHOX2-206ENST00000554685 GJD2Q9UKL4 321 aa16.15■□□□□ 0.18
SHOX2-206ENST00000554685 CTAGE5O15320 804 aa16.14■□□□□ 0.17
SHOX2-206ENST00000554685 FKTNO75072 461 aa16.14■□□□□ 0.17
SHOX2-206ENST00000554685 ZNF202O95125 648 aa16.14■□□□□ 0.17
SHOX2-206ENST00000554685 KCNA2P16389 499 aa16.14■□□□□ 0.17
SHOX2-206ENST00000554685 MUTP22033 750 aa16.14■□□□□ 0.17
SHOX2-206ENST00000554685 JAK3P52333 1124 aa16.14■□□□□ 0.17
SHOX2-206ENST00000554685 SEMA3FQ13275 785 aa16.14■□□□□ 0.17
SHOX2-206ENST00000554685 ITGB3BPQ13352 177 aaPredicted RBP16.14■□□□□ 0.17
SHOX2-206ENST00000554685 SNW1Q13573 536 aaKnown RBP16.14■□□□□ 0.17
SHOX2-206ENST00000554685 TTLL4Q14679 1199 aa16.14■□□□□ 0.17
SHOX2-206ENST00000554685 RRAGBQ5VZM2 374 aa16.14■□□□□ 0.17
SHOX2-206ENST00000554685 ZNF746Q6NUN9 644 aaPredicted RBP16.14■□□□□ 0.17
SHOX2-206ENST00000554685 KANK3Q6NY19 840 aa16.14■□□□□ 0.17
SHOX2-206ENST00000554685 CAVIN1Q6NZI2 390 aaKnown RBP16.14■□□□□ 0.17
SHOX2-206ENST00000554685 SMAP1Q8IYB5 467 aaPredicted RBP16.14■□□□□ 0.17
SHOX2-206ENST00000554685 CEP57L1Q8IYX8 460 aa16.14■□□□□ 0.17
SHOX2-206ENST00000554685 GJA10Q969M2 543 aa16.14■□□□□ 0.17
SHOX2-206ENST00000554685 TRIM47Q96LD4 638 aa16.14■□□□□ 0.17
SHOX2-206ENST00000554685 NUP62CLQ9H1M0 184 aa16.14■□□□□ 0.17
SHOX2-206ENST00000554685 MAGEF1Q9HAY2 307 aa16.14■□□□□ 0.17
SHOX2-206ENST00000554685 DISC1Q9NRI5 854 aa16.14■□□□□ 0.17
SHOX2-206ENST00000554685 PKD2L1Q9P0L9 805 aa16.14■□□□□ 0.17
SHOX2-206ENST00000554685 PP2D1A8MPX8 630 aa16.13■□□□□ 0.17
SHOX2-206ENST00000554685 WDR64B1ANS9 1081 aa16.13■□□□□ 0.17
SHOX2-206ENST00000554685 POLR2DO15514 142 aaKnown RBP16.13■□□□□ 0.17
SHOX2-206ENST00000554685 DHX15O43143 795 aaKnown RBP16.13■□□□□ 0.17
SHOX2-206ENST00000554685 LETM1O95202 739 aaPredicted RBP16.13■□□□□ 0.17
SHOX2-206ENST00000554685 CYP2B6P20813 491 aa16.13■□□□□ 0.17
SHOX2-206ENST00000554685 CCT6AP40227 531 aaKnown RBP16.13■□□□□ 0.17
SHOX2-206ENST00000554685 STAT6P42226 847 aa16.13■□□□□ 0.17
SHOX2-206ENST00000554685 EPHA7Q15375 998 aa16.13■□□□□ 0.17
SHOX2-206ENST00000554685 B3GNT9Q6UX72 402 aa16.13■□□□□ 0.17
SHOX2-206ENST00000554685 USP49Q70CQ1 688 aa16.13■□□□□ 0.17
SHOX2-206ENST00000554685 EEPD1Q7L9B9 569 aa16.13■□□□□ 0.17
SHOX2-206ENST00000554685 MIER3Q7Z3K6 550 aa16.13■□□□□ 0.17
SHOX2-206ENST00000554685 FBXO16Q8IX29 292 aaPredicted RBP16.13■□□□□ 0.17
SHOX2-206ENST00000554685 ELOA2Q8IYF1 753 aaPredicted RBP16.13■□□□□ 0.17
SHOX2-206ENST00000554685 CNNM3Q8NE01 707 aa16.13■□□□□ 0.17
SHOX2-206ENST00000554685 UIMC1Q96RL1 719 aa16.13■□□□□ 0.17
SHOX2-206ENST00000554685 POLR3CQ9BUI4 534 aaPredicted RBP16.13■□□□□ 0.17
SHOX2-206ENST00000554685 UNC45AQ9H3U1 944 aa16.13■□□□□ 0.17
SHOX2-206ENST00000554685 CLSTN2Q9H4D0 955 aa16.13■□□□□ 0.17
SHOX2-206ENST00000554685 JPH1Q9HDC5 661 aaPredicted RBP16.13■□□□□ 0.17
SHOX2-206ENST00000554685 TUFT1Q9NNX1 390 aa16.13■□□□□ 0.17
SHOX2-206ENST00000554685 SLC9A2Q9UBY0 812 aa16.13■□□□□ 0.17
SHOX2-206ENST00000554685 STK17AQ9UEE5 414 aa16.13■□□□□ 0.17
SHOX2-206ENST00000554685 NRBP1Q9UHY1 535 aa16.13■□□□□ 0.17
SHOX2-206ENST00000554685 ZNFX1Q9P2E3 1918 aaKnown RBP16.13■□□□□ 0.17
SHOX2-206ENST00000554685 LRRC37A2A6NM11 1700 aa16.13■□□□□ 0.17
SHOX2-206ENST00000554685 PLXNA1Q9UIW2 1896 aa16.12■□□□□ 0.17
SHOX2-206ENST00000554685 RBM47A0AV96 593 aaKnown RBP16.12■□□□□ 0.17
SHOX2-206ENST00000554685 CHMP2AO43633 222 aa16.12■□□□□ 0.17
SHOX2-206ENST00000554685 DKC1O60832 514 aaKnown RBP eCLIP16.12■□□□□ 0.17
SHOX2-206ENST00000554685 ATP9AO75110 1047 aa16.12■□□□□ 0.17
SHOX2-206ENST00000554685 ECM2O94769 699 aaPredicted RBP16.12■□□□□ 0.17
SHOX2-206ENST00000554685 SLFN14P0C7P3 912 aa16.12■□□□□ 0.17
SHOX2-206ENST00000554685 RPA1P27694 616 aa16.12■□□□□ 0.17
SHOX2-206ENST00000554685 CTGFP29279 349 aa16.12■□□□□ 0.17
SHOX2-206ENST00000554685 CDC25AP30304 524 aa16.12■□□□□ 0.17
SHOX2-206ENST00000554685 PRMT2P55345 433 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms