RNA–Protein interactions for RNA: ENST00000554673.5

ATXN3-230, Transcript of ataxin 3, humanhuman

TSL 5

Gene ATXN3, Length 981 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-230ENST00000554673 COL20A1Q9P218 1284 aa6.74□□□□□ -1.33
ATXN3-230ENST00000554673 FBXO2Q9UK22 296 aaPredicted RBP6.74□□□□□ -1.33
ATXN3-230ENST00000554673 DOLKQ9UPQ8 538 aa6.74□□□□□ -1.33
ATXN3-230ENST00000554673 TMX2Q9Y320 296 aa6.74□□□□□ -1.33
ATXN3-230ENST00000554673 PCDHGA11Q9Y5H2 935 aa6.74□□□□□ -1.33
ATXN3-230ENST00000554673 ASTN1O14525 1302 aa6.74□□□□□ -1.33
ATXN3-230ENST00000554673 GLTPD2A6NH11 291 aa6.73□□□□□ -1.33
ATXN3-230ENST00000554673 FOXN1O15353 648 aa6.73□□□□□ -1.33
ATXN3-230ENST00000554673 TREHO43280 583 aa6.73□□□□□ -1.33
ATXN3-230ENST00000554673 AP5Z1O43299 807 aa6.73□□□□□ -1.33
ATXN3-230ENST00000554673 DEXIO95424 95 aa6.73□□□□□ -1.33
ATXN3-230ENST00000554673 TTLL1O95922 423 aa6.73□□□□□ -1.33
ATXN3-230ENST00000554673 HSP90AA1P07900 732 aaKnown RBP6.73□□□□□ -1.33
ATXN3-230ENST00000554673 RHOQP17081 205 aa6.73□□□□□ -1.33
ATXN3-230ENST00000554673 MMP14P50281 582 aa6.73□□□□□ -1.33
ATXN3-230ENST00000554673 FGD1P98174 961 aa6.73□□□□□ -1.33
ATXN3-230ENST00000554673 CEBPZQ03701 1054 aaKnown RBP6.73□□□□□ -1.33
ATXN3-230ENST00000554673 ICA1Q05084 483 aa6.73□□□□□ -1.33
ATXN3-230ENST00000554673 UBE2SQ16763 222 aa6.73□□□□□ -1.33
ATXN3-230ENST00000554673 QRICH1Q2TAL8 776 aa6.73□□□□□ -1.33
ATXN3-230ENST00000554673 FAM83BQ5T0W9 1011 aa6.73□□□□□ -1.33
ATXN3-230ENST00000554673 SLFN13Q68D06 897 aa6.73□□□□□ -1.33
ATXN3-230ENST00000554673 PRICKLE2Q7Z3G6 844 aa6.73□□□□□ -1.33
ATXN3-230ENST00000554673 TMC7Q7Z402 723 aa6.73□□□□□ -1.33
ATXN3-230ENST00000554673 CATIPQ7Z7H3 387 aa6.73□□□□□ -1.33
ATXN3-230ENST00000554673 SLC43A3Q8NBI5 491 aa6.73□□□□□ -1.33
ATXN3-230ENST00000554673 DAGLBQ8NCG7 672 aa6.73□□□□□ -1.33
ATXN3-230ENST00000554673 GMCL1P1Q8NEA9 526 aa6.73□□□□□ -1.33
ATXN3-230ENST00000554673 HELQQ8TDG4 1101 aa6.73□□□□□ -1.33
ATXN3-230ENST00000554673 ERCC4Q92889 916 aaPredicted RBP6.73□□□□□ -1.33
ATXN3-230ENST00000554673 GJA10Q969M2 543 aa6.73□□□□□ -1.33
ATXN3-230ENST00000554673 CCDC17Q96LX7 622 aa6.73□□□□□ -1.33
ATXN3-230ENST00000554673 TMX4Q9H1E5 349 aaPredicted RBP6.73□□□□□ -1.33
ATXN3-230ENST00000554673 KAT14Q9H8E8 782 aa6.73□□□□□ -1.33
ATXN3-230ENST00000554673 NMRK2Q9NPI5 230 aa6.73□□□□□ -1.33
ATXN3-230ENST00000554673 RTEL1Q9NZ71 1219 aa6.73□□□□□ -1.33
ATXN3-230ENST00000554673 HERC5Q9UII4 1024 aaKnown RBP6.73□□□□□ -1.33
ATXN3-230ENST00000554673 PCDHA7Q9UN72 937 aa6.73□□□□□ -1.33
ATXN3-230ENST00000554673 PCDHA6Q9UN73 950 aa6.73□□□□□ -1.33
ATXN3-230ENST00000554673 TELO2Q9Y4R8 837 aa6.73□□□□□ -1.33
ATXN3-230ENST00000554673 PCDHA8Q9Y5H6 950 aa6.73□□□□□ -1.33
ATXN3-230ENST00000554673 FAM237AA0A1B0GTK4 181 aa6.72□□□□□ -1.33
ATXN3-230ENST00000554673 ANKRD62A6NC57 917 aa6.72□□□□□ -1.33
ATXN3-230ENST00000554673 MPHOSPH10O00566 681 aaKnown RBP6.72□□□□□ -1.33
ATXN3-230ENST00000554673 MEIS2O14770 477 aa6.72□□□□□ -1.33
ATXN3-230ENST00000554673 PROCP04070 461 aa6.72□□□□□ -1.33
ATXN3-230ENST00000554673 HLA-DOAP06340 250 aa6.72□□□□□ -1.33
ATXN3-230ENST00000554673 PTPRAP18433 802 aa6.72□□□□□ -1.33
ATXN3-230ENST00000554673 PRKG1Q13976 671 aa6.72□□□□□ -1.33
ATXN3-230ENST00000554673 ZYXQ15942 572 aaKnown RBP6.72□□□□□ -1.33
ATXN3-230ENST00000554673 SPECC1Q5M775 1068 aa6.72□□□□□ -1.33
ATXN3-230ENST00000554673 RIPOR1Q6ZS17 1223 aa6.72□□□□□ -1.33
ATXN3-230ENST00000554673 LYSMD3Q7Z3D4 306 aa6.72□□□□□ -1.33
ATXN3-230ENST00000554673 NOP9Q86U38 636 aaKnown RBP6.72□□□□□ -1.33
ATXN3-230ENST00000554673 TMTC2Q8N394 836 aa6.72□□□□□ -1.33
ATXN3-230ENST00000554673 CLEC4DQ8WXI8 215 aa6.72□□□□□ -1.33
ATXN3-230ENST00000554673 LENG9Q96B70 501 aa6.72□□□□□ -1.33
ATXN3-230ENST00000554673 CDCA5Q96FF9 252 aa6.72□□□□□ -1.33
ATXN3-230ENST00000554673 GMCL1Q96IK5 515 aa6.72□□□□□ -1.33
ATXN3-230ENST00000554673 MED15Q96RN5 788 aa6.72□□□□□ -1.33
ATXN3-230ENST00000554673 MKNK1Q9BUB5 465 aa6.72□□□□□ -1.33
ATXN3-230ENST00000554673 ZMYND12Q9H0C1 365 aa6.72□□□□□ -1.33
ATXN3-230ENST00000554673 VCPKMTQ9H867 229 aa6.72□□□□□ -1.33
ATXN3-230ENST00000554673 KANSL2Q9H9L4 492 aa6.72□□□□□ -1.33
ATXN3-230ENST00000554673 VAT1LQ9HCJ6 419 aa6.72□□□□□ -1.33
ATXN3-230ENST00000554673 ADARB2Q9NS39 739 aaKnown RBP6.72□□□□□ -1.33
ATXN3-230ENST00000554673 BARHL2Q9NY43 387 aa6.72□□□□□ -1.33
ATXN3-230ENST00000554673 HDAC9Q9UKV0 1011 aa6.72□□□□□ -1.33
ATXN3-230ENST00000554673 CDV3Q9UKY7 258 aaKnown RBP6.72□□□□□ -1.33
ATXN3-230ENST00000554673 PRR12Q9ULL5 1215 aa6.72□□□□□ -1.33
ATXN3-230ENST00000554673 HPSEQ9Y251 543 aa6.72□□□□□ -1.33
ATXN3-230ENST00000554673 RIPK3Q9Y572 518 aa6.72□□□□□ -1.33
ATXN3-230ENST00000554673 MGAMO43451 1857 aa6.72□□□□□ -1.33
ATXN3-230ENST00000554673 ELP1O95163 1332 aa6.72□□□□□ -1.33
ATXN3-230ENST00000554673 PITPNM2Q9BZ72 1349 aa6.72□□□□□ -1.33
ATXN3-230ENST00000554673 PP2D1A8MPX8 630 aa6.71□□□□□ -1.34
ATXN3-230ENST00000554673 SLC37A4O43826 429 aa6.71□□□□□ -1.34
ATXN3-230ENST00000554673 CNMDO75829 334 aa6.71□□□□□ -1.34
ATXN3-230ENST00000554673 SLC3A2P08195 630 aaKnown RBP6.71□□□□□ -1.34
ATXN3-230ENST00000554673 PARP1P09874 1014 aaKnown RBP6.71□□□□□ -1.34
ATXN3-230ENST00000554673 BCRP11274 1271 aa6.71□□□□□ -1.34
ATXN3-230ENST00000554673 MARCKSP29966 332 aaPredicted RBP6.71□□□□□ -1.34
ATXN3-230ENST00000554673 EPHX2P34913 555 aa6.71□□□□□ -1.34
ATXN3-230ENST00000554673 FANCCQ00597 558 aa6.71□□□□□ -1.34
ATXN3-230ENST00000554673 CAP1Q01518 475 aa6.71□□□□□ -1.34
ATXN3-230ENST00000554673 ATP2B2Q01814 1243 aa6.71□□□□□ -1.34
ATXN3-230ENST00000554673 FSTL1Q12841 308 aa6.71□□□□□ -1.34
ATXN3-230ENST00000554673 VGLL4Q14135 290 aa6.71□□□□□ -1.34
ATXN3-230ENST00000554673 DSC3Q14574 896 aa6.71□□□□□ -1.34
ATXN3-230ENST00000554673 SLC39A14Q15043 492 aa6.71□□□□□ -1.34
ATXN3-230ENST00000554673 KLHL40Q2TBA0 621 aa6.71□□□□□ -1.34
ATXN3-230ENST00000554673 NOL9Q5SY16 702 aaKnown RBP6.71□□□□□ -1.34
ATXN3-230ENST00000554673 TREML2Q5T2D2 321 aa6.71□□□□□ -1.34
ATXN3-230ENST00000554673 ANO1Q5XXA6 986 aa6.71□□□□□ -1.34
ATXN3-230ENST00000554673 RBM43Q6ZSC3 357 aaKnown RBP6.71□□□□□ -1.34
ATXN3-230ENST00000554673 NT5DC4Q86YG4 428 aa6.71□□□□□ -1.34
ATXN3-230ENST00000554673 HOMER1Q86YM7 354 aa6.71□□□□□ -1.34
ATXN3-230ENST00000554673 NOSTRINQ8IVI9 506 aa6.71□□□□□ -1.34
ATXN3-230ENST00000554673 ZNF784Q8NCA9 323 aaPredicted RBP6.71□□□□□ -1.34
ATXN3-230ENST00000554673 IL31RAQ8NI17 732 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms