RNA–Protein interactions for RNA: ENST00000554607.1

FOXA1-204, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 789 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-204ENST00000554607 SMIM10L2BP0DMW5 78 aa28.04■■■□□ 2.08
FOXA1-204ENST00000554607 GNAT1P11488 350 aa28.04■■■□□ 2.08
FOXA1-204ENST00000554607 HOXC8P31273 242 aa28.04■■■□□ 2.08
FOXA1-204ENST00000554607 GRM4Q14833 912 aa28.04■■■□□ 2.08
FOXA1-204ENST00000554607 CYB5R4Q7L1T6 521 aa28.04■■■□□ 2.08
FOXA1-204ENST00000554607 PIGSQ96S52 555 aa28.04■■■□□ 2.08
FOXA1-204ENST00000554607 USP26Q9BXU7 913 aa28.04■■■□□ 2.08
FOXA1-204ENST00000554607 PI4K2BG5E9Z4 385 aa28.03■■■□□ 2.08
FOXA1-204ENST00000554607 IGHDP01880 384 aa28.03■■■□□ 2.08
FOXA1-204ENST00000554607 LGALS2P05162 132 aa28.03■■■□□ 2.08
FOXA1-204ENST00000554607 NEDD9Q14511 834 aa28.03■■■□□ 2.08
FOXA1-204ENST00000554607 MRPL38Q96DV4 380 aaKnown RBP28.03■■■□□ 2.08
FOXA1-204ENST00000554607 PNMA6FA0A0J9YX94 578 aa28.02■■■□□ 2.08
FOXA1-204ENST00000554607 ERICH2A1L162 156 aa28.02■■■□□ 2.08
FOXA1-204ENST00000554607 KCNA5P22460 613 aa28.02■■■□□ 2.08
FOXA1-204ENST00000554607 ICAM3P32942 547 aa28.02■■■□□ 2.08
FOXA1-204ENST00000554607 PUS10Q3MIT2 529 aaKnown RBP28.02■■■□□ 2.08
FOXA1-204ENST00000554607 GPKOWQ92917 476 aaPredicted RBP eCLIP28.02■■■□□ 2.08
FOXA1-204ENST00000554607 TOP1MTQ969P6 601 aa28.02■■■□□ 2.08
FOXA1-204ENST00000554607 RNPEPQ9H4A4 650 aa28.02■■■□□ 2.08
FOXA1-204ENST00000554607 MICAL3Q7RTP6 2002 aa28.02■■■□□ 2.08
FOXA1-204ENST00000554607 TREHO43280 583 aa28.01■■■□□ 2.07
FOXA1-204ENST00000554607 EPC2Q52LR7 807 aa28.01■■■□□ 2.07
FOXA1-204ENST00000554607 METTL7BQ6UX53 244 aa28.01■■■□□ 2.07
FOXA1-204ENST00000554607 KHSRPQ92945 711 aaKnown RBP eCLIP28.01■■■□□ 2.07
FOXA1-204ENST00000554607 ZFP91Q96JP5 570 aaPredicted RBP28.01■■■□□ 2.07
FOXA1-204ENST00000554607 YME1L1Q96TA2 773 aa28.01■■■□□ 2.07
FOXA1-204ENST00000554607 IFIT3O14879 490 aaKnown RBP28■■■□□ 2.07
FOXA1-204ENST00000554607 TIGD5Q53EQ6 642 aa28■■■□□ 2.07
FOXA1-204ENST00000554607 FAM178BQ8IXR5 827 aa28■■■□□ 2.07
FOXA1-204ENST00000554607 GJD3Q8N144 294 aa28■■■□□ 2.07
FOXA1-204ENST00000554607 GADD45GIP1Q8TAE8 222 aaPredicted RBP28■■■□□ 2.07
FOXA1-204ENST00000554607 CD320Q9NPF0 282 aa28■■■□□ 2.07
FOXA1-204ENST00000554607 U3KPZ7 1027 aaPredicted RBP28■■■□□ 2.07
FOXA1-204ENST00000554607 SPATA31C2B4DYI2 1134 aa27.99■■■□□ 2.07
FOXA1-204ENST00000554607 SART3Q15020 963 aaKnown RBP27.99■■■□□ 2.07
FOXA1-204ENST00000554607 SLC35G1Q2M3R5 365 aa27.99■■■□□ 2.07
FOXA1-204ENST00000554607 APBB2Q92870 758 aa27.99■■■□□ 2.07
FOXA1-204ENST00000554607 INPP4AQ96PE3 977 aaPredicted RBP27.99■■■□□ 2.07
FOXA1-204ENST00000554607 ZNF215Q9UL58 517 aaPredicted RBP27.99■■■□□ 2.07
FOXA1-204ENST00000554607 FRMPD4Q14CM0 1322 aa27.98■■■□□ 2.07
FOXA1-204ENST00000554607 H3BNC9 293 aa27.98■■■□□ 2.07
FOXA1-204ENST00000554607 HOXD11P31277 338 aaPredicted RBP27.98■■■□□ 2.07
FOXA1-204ENST00000554607 MRPS9P82933 396 aaKnown RBP27.98■■■□□ 2.07
FOXA1-204ENST00000554607 PTCRAQ6ISU1 281 aaPredicted RBP27.98■■■□□ 2.07
FOXA1-204ENST00000554607 CYFIP1Q7L576 1253 aa27.98■■■□□ 2.07
FOXA1-204ENST00000554607 GPR20Q99678 358 aa27.98■■■□□ 2.07
FOXA1-204ENST00000554607 BCAS3Q9H6U6 928 aa27.98■■■□□ 2.07
FOXA1-204ENST00000554607 C11orf16Q9NQ32 467 aa27.98■■■□□ 2.07
FOXA1-204ENST00000554607 FIBPO43427 364 aa27.97■■■□□ 2.07
FOXA1-204ENST00000554607 CYTH3O43739 400 aa27.97■■■□□ 2.07
FOXA1-204ENST00000554607 UPP2O95045 317 aa27.97■■■□□ 2.07
FOXA1-204ENST00000554607 CTSHP09668 335 aa27.97■■■□□ 2.07
FOXA1-204ENST00000554607 GPM6BQ13491 265 aa27.97■■■□□ 2.07
FOXA1-204ENST00000554607 WTAPQ15007 396 aa27.97■■■□□ 2.07
FOXA1-204ENST00000554607 TMEM192Q8IY95 271 aa27.97■■■□□ 2.07
FOXA1-204ENST00000554607 SETD4Q9NVD3 440 aa27.97■■■□□ 2.07
FOXA1-204ENST00000554607 BAZ2BQ9UIF8 2168 aaKnown RBP27.96■■■□□ 2.07
FOXA1-204ENST00000554607 GRXCR2A6NFK2 248 aa27.96■■■□□ 2.07
FOXA1-204ENST00000554607 SSTR3P32745 418 aaPredicted RBP27.96■■■□□ 2.07
FOXA1-204ENST00000554607 TROAPQ12815 778 aa27.96■■■□□ 2.07
FOXA1-204ENST00000554607 RALYLQ86SE5 291 aaKnown RBP27.96■■■□□ 2.07
FOXA1-204ENST00000554607 BANK1Q8NDB2 785 aa27.96■■■□□ 2.07
FOXA1-204ENST00000554607 RUFY2Q8WXA3 655 aa27.96■■■□□ 2.07
FOXA1-204ENST00000554607 IL25Q9H293 177 aa27.96■■■□□ 2.07
FOXA1-204ENST00000554607 FAM86C2PA6NEL3 165 aa27.95■■■□□ 2.06
FOXA1-204ENST00000554607 FAM26DQ5JW98 314 aa27.95■■■□□ 2.06
FOXA1-204ENST00000554607 XRRA1Q6P2D8 792 aa27.95■■■□□ 2.06
FOXA1-204ENST00000554607 CATIPQ7Z7H3 387 aa27.95■■■□□ 2.06
FOXA1-204ENST00000554607 NEK9Q8TD19 979 aa27.95■■■□□ 2.06
FOXA1-204ENST00000554607 SENP7Q9BQF6 1050 aa27.95■■■□□ 2.06
FOXA1-204ENST00000554607 IFIH1Q9BYX4 1025 aaKnown RBP27.95■■■□□ 2.06
FOXA1-204ENST00000554607 RTEL1Q9NZ71 1219 aa27.95■■■□□ 2.06
FOXA1-204ENST00000554607 LOC101059915A0A1B0GWI6 518 aaPredicted RBP27.94■■■□□ 2.06
FOXA1-204ENST00000554607 CYP21A2P08686 494 aa27.94■■■□□ 2.06
FOXA1-204ENST00000554607 ALADP13716 330 aa27.94■■■□□ 2.06
FOXA1-204ENST00000554607 IL9P15248 144 aa27.94■■■□□ 2.06
FOXA1-204ENST00000554607 GIMAP8Q8ND71 665 aaPredicted RBP27.94■■■□□ 2.06
FOXA1-204ENST00000554607 NCOA7Q8NI08 942 aa27.94■■■□□ 2.06
FOXA1-204ENST00000554607 CUL5Q93034 780 aa27.94■■■□□ 2.06
FOXA1-204ENST00000554607 FAM50BQ9Y247 325 aa27.94■■■□□ 2.06
FOXA1-204ENST00000554607 RBAK-RBAKDNI3L0D1 243 aa27.93■■■□□ 2.06
FOXA1-204ENST00000554607 ARHGAP4P98171 946 aa27.93■■■□□ 2.06
FOXA1-204ENST00000554607 SEMA3FQ13275 785 aa27.93■■■□□ 2.06
FOXA1-204ENST00000554607 UTP14CQ5TAP6 766 aaKnown RBP27.93■■■□□ 2.06
FOXA1-204ENST00000554607 SMARCC2Q8TAQ2 1214 aa27.93■■■□□ 2.06
FOXA1-204ENST00000554607 PABPC5Q96DU9 382 aaKnown RBP27.93■■■□□ 2.06
FOXA1-204ENST00000554607 NSUN3Q9H649 340 aaKnown RBP27.93■■■□□ 2.06
FOXA1-204ENST00000554607 COL4A6Q14031 1691 aa27.93■■■□□ 2.06
FOXA1-204ENST00000554607 NRCAMQ92823 1304 aa27.92■■■□□ 2.06
FOXA1-204ENST00000554607 PRR33A8MZF0 331 aa27.92■■■□□ 2.06
FOXA1-204ENST00000554607 ADAM17P78536 824 aa27.92■■■□□ 2.06
FOXA1-204ENST00000554607 PCNX4Q63HM2 1172 aa27.92■■■□□ 2.06
FOXA1-204ENST00000554607 NLRX1Q86UT6 975 aa27.92■■■□□ 2.06
FOXA1-204ENST00000554607 IL17RAQ96F46 866 aa27.92■■■□□ 2.06
FOXA1-204ENST00000554607 OSBPL7Q9BZF2 842 aa27.92■■■□□ 2.06
FOXA1-204ENST00000554607 SENP2Q9HC62 589 aa27.92■■■□□ 2.06
FOXA1-204ENST00000554607 NCK2O43639 380 aa27.91■■■□□ 2.06
FOXA1-204ENST00000554607 TCEAL5Q5H9L2 206 aa27.91■■■□□ 2.06
FOXA1-204ENST00000554607 TRIM50Q86XT4 487 aa27.91■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms