RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 NOP56O00567 594 aaKnown RBP16.46■□□□□ 0.23
CHMP1A-210ENST00000551981 POLR2MP0CAP2 368 aa16.46■□□□□ 0.23
CHMP1A-210ENST00000551981 IL9P15248 144 aa16.46■□□□□ 0.23
CHMP1A-210ENST00000551981 SP2Q02086 613 aa16.46■□□□□ 0.23
CHMP1A-210ENST00000551981 GNPTABQ3T906 1256 aa16.46■□□□□ 0.23
CHMP1A-210ENST00000551981 STAG2Q8N3U4 1231 aa16.46■□□□□ 0.23
CHMP1A-210ENST00000551981 COL4A6Q14031 1691 aa16.46■□□□□ 0.23
CHMP1A-210ENST00000551981 RALGAPA2Q2PPJ7 1873 aa16.46■□□□□ 0.22
CHMP1A-210ENST00000551981 H3BNC9 293 aa16.45■□□□□ 0.22
CHMP1A-210ENST00000551981 LGALS2P05162 132 aa16.45■□□□□ 0.22
CHMP1A-210ENST00000551981 SMIM10L2AP0DMW4 78 aa16.45■□□□□ 0.22
CHMP1A-210ENST00000551981 SMIM10L2BP0DMW5 78 aa16.45■□□□□ 0.22
CHMP1A-210ENST00000551981 GNAT1P11488 350 aa16.45■□□□□ 0.22
CHMP1A-210ENST00000551981 GPM6BQ13491 265 aa16.45■□□□□ 0.22
CHMP1A-210ENST00000551981 CSPP1Q1MSJ5 1256 aa16.45■□□□□ 0.22
CHMP1A-210ENST00000551981 BANK1Q8NDB2 785 aa16.45■□□□□ 0.22
CHMP1A-210ENST00000551981 IL31RAQ8NI17 732 aa16.45■□□□□ 0.22
CHMP1A-210ENST00000551981 NEK9Q8TD19 979 aa16.45■□□□□ 0.22
CHMP1A-210ENST00000551981 APBB2Q92870 758 aa16.45■□□□□ 0.22
CHMP1A-210ENST00000551981 TOP1MTQ969P6 601 aa16.45■□□□□ 0.22
CHMP1A-210ENST00000551981 MTMR8Q96EF0 704 aa16.45■□□□□ 0.22
CHMP1A-210ENST00000551981 USP26Q9BXU7 913 aa16.45■□□□□ 0.22
CHMP1A-210ENST00000551981 H3BQ06 376 aaPredicted RBP16.44■□□□□ 0.22
CHMP1A-210ENST00000551981 TREHO43280 583 aa16.44■□□□□ 0.22
CHMP1A-210ENST00000551981 PPP1R11O60927 126 aaPredicted RBP16.44■□□□□ 0.22
CHMP1A-210ENST00000551981 UPP2O95045 317 aa16.44■□□□□ 0.22
CHMP1A-210ENST00000551981 CTSHP09668 335 aa16.44■□□□□ 0.22
CHMP1A-210ENST00000551981 HOXC8P31273 242 aa16.44■□□□□ 0.22
CHMP1A-210ENST00000551981 B4GALNT3Q6L9W6 998 aa16.44■□□□□ 0.22
CHMP1A-210ENST00000551981 FCHSD1Q86WN1 690 aa16.44■□□□□ 0.22
CHMP1A-210ENST00000551981 HOMER1Q86YM7 354 aa16.44■□□□□ 0.22
CHMP1A-210ENST00000551981 TMEM192Q8IY95 271 aa16.44■□□□□ 0.22
CHMP1A-210ENST00000551981 PABPC5Q96DU9 382 aaKnown RBP16.44■□□□□ 0.22
CHMP1A-210ENST00000551981 IFIH1Q9BYX4 1025 aaKnown RBP16.44■□□□□ 0.22
CHMP1A-210ENST00000551981 OSBPL3Q9H4L5 887 aa16.44■□□□□ 0.22
CHMP1A-210ENST00000551981 MAD2L2Q9UI95 211 aa16.44■□□□□ 0.22
CHMP1A-210ENST00000551981 PALM3A6NDB9 673 aaPredicted RBP16.43■□□□□ 0.22
CHMP1A-210ENST00000551981 STAM2O75886 525 aa16.43■□□□□ 0.22
CHMP1A-210ENST00000551981 AAMPQ13685 434 aa16.43■□□□□ 0.22
CHMP1A-210ENST00000551981 NEDD9Q14511 834 aa16.43■□□□□ 0.22
CHMP1A-210ENST00000551981 EP400NLQ6ZTU2 488 aa16.43■□□□□ 0.22
CHMP1A-210ENST00000551981 PLEKHM2Q8IWE5 1019 aa16.43■□□□□ 0.22
CHMP1A-210ENST00000551981 UIMC1Q96RL1 719 aa16.43■□□□□ 0.22
CHMP1A-210ENST00000551981 RWDD1Q9H446 243 aaPredicted RBP16.43■□□□□ 0.22
CHMP1A-210ENST00000551981 RNPEPQ9H4A4 650 aa16.43■□□□□ 0.22
CHMP1A-210ENST00000551981 NSUN3Q9H649 340 aaKnown RBP16.43■□□□□ 0.22
CHMP1A-210ENST00000551981 ZNF215Q9UL58 517 aaPredicted RBP16.43■□□□□ 0.22
CHMP1A-210ENST00000551981 KAT6AQ92794 2004 aa16.42■□□□□ 0.22
CHMP1A-210ENST00000551981 NCK2O43639 380 aa16.42■□□□□ 0.22
CHMP1A-210ENST00000551981 TRDNQ13061 729 aa16.42■□□□□ 0.22
CHMP1A-210ENST00000551981 SEC23AQ15436 765 aa16.42■□□□□ 0.22
CHMP1A-210ENST00000551981 TCEAL5Q5H9L2 206 aa16.42■□□□□ 0.22
CHMP1A-210ENST00000551981 METTL7BQ6UX53 244 aa16.42■□□□□ 0.22
CHMP1A-210ENST00000551981 CHD1LQ86WJ1 897 aa16.42■□□□□ 0.22
CHMP1A-210ENST00000551981 SMC5Q8IY18 1101 aa16.42■□□□□ 0.22
CHMP1A-210ENST00000551981 GPKOWQ92917 476 aaPredicted RBP eCLIP16.42■□□□□ 0.22
CHMP1A-210ENST00000551981 ZFP91Q96JP5 570 aaPredicted RBP16.42■□□□□ 0.22
CHMP1A-210ENST00000551981 PRKAG3Q9UGI9 489 aa16.42■□□□□ 0.22
CHMP1A-210ENST00000551981 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.41■□□□□ 0.22
CHMP1A-210ENST00000551981 DCXO43602 365 aa16.41■□□□□ 0.22
CHMP1A-210ENST00000551981 GRM4Q14833 912 aa16.41■□□□□ 0.22
CHMP1A-210ENST00000551981 FIBCD1Q8N539 461 aa16.41■□□□□ 0.22
CHMP1A-210ENST00000551981 IL17RAQ96F46 866 aa16.41■□□□□ 0.22
CHMP1A-210ENST00000551981 PIGSQ96S52 555 aa16.41■□□□□ 0.22
CHMP1A-210ENST00000551981 SETD4Q9NVD3 440 aa16.41■□□□□ 0.22
CHMP1A-210ENST00000551981 RWDD3Q9Y3V2 267 aa16.41■□□□□ 0.22
CHMP1A-210ENST00000551981 DOCK5Q9H7D0 1870 aa16.41■□□□□ 0.22
CHMP1A-210ENST00000551981 BAZ2BQ9UIF8 2168 aaKnown RBP16.41■□□□□ 0.22
CHMP1A-210ENST00000551981 PNMA6FA0A0J9YX94 578 aa16.4■□□□□ 0.22
CHMP1A-210ENST00000551981 ERICH2A1L162 156 aa16.4■□□□□ 0.22
CHMP1A-210ENST00000551981 SPATA31C2B4DYI2 1134 aa16.4■□□□□ 0.22
CHMP1A-210ENST00000551981 FIBPO43427 364 aa16.4■□□□□ 0.22
CHMP1A-210ENST00000551981 ICAM3P32942 547 aa16.4■□□□□ 0.22
CHMP1A-210ENST00000551981 CTNNB1P35222 781 aa16.4■□□□□ 0.22
CHMP1A-210ENST00000551981 ARHGAP4P98171 946 aa16.4■□□□□ 0.22
CHMP1A-210ENST00000551981 COL19A1Q14993 1142 aa16.4■□□□□ 0.22
CHMP1A-210ENST00000551981 CYFIP1Q7L576 1253 aa16.4■□□□□ 0.22
CHMP1A-210ENST00000551981 INPP4AQ96PE3 977 aaPredicted RBP16.4■□□□□ 0.22
CHMP1A-210ENST00000551981 GPR20Q99678 358 aa16.4■□□□□ 0.22
CHMP1A-210ENST00000551981 C11orf84Q9BUA3 381 aaPredicted RBP16.4■□□□□ 0.22
CHMP1A-210ENST00000551981 RIOX1Q9H6W3 641 aa16.4■□□□□ 0.22
CHMP1A-210ENST00000551981 CLDND1Q9NY35 253 aa16.4■□□□□ 0.22
CHMP1A-210ENST00000551981 FRMPD4Q14CM0 1322 aa16.4■□□□□ 0.22
CHMP1A-210ENST00000551981 RBAK-RBAKDNI3L0D1 243 aa16.39■□□□□ 0.21
CHMP1A-210ENST00000551981 RB1P06400 928 aa16.39■□□□□ 0.21
CHMP1A-210ENST00000551981 NUCB1Q02818 461 aa16.39■□□□□ 0.21
CHMP1A-210ENST00000551981 ZP2Q05996 745 aa16.39■□□□□ 0.21
CHMP1A-210ENST00000551981 FAM26DQ5JW98 314 aa16.39■□□□□ 0.21
CHMP1A-210ENST00000551981 CYB5R4Q7L1T6 521 aa16.39■□□□□ 0.21
CHMP1A-210ENST00000551981 LMBR1Q8WVP7 490 aa16.39■□□□□ 0.21
CHMP1A-210ENST00000551981 UPF3BQ9BZI7 483 aaKnown RBP16.39■□□□□ 0.21
CHMP1A-210ENST00000551981 LMAN2LQ9H0V9 348 aa16.39■□□□□ 0.21
CHMP1A-210ENST00000551981 BCAS3Q9H6U6 928 aa16.39■□□□□ 0.21
CHMP1A-210ENST00000551981 IFIT3O14879 490 aaKnown RBP16.38■□□□□ 0.21
CHMP1A-210ENST00000551981 MRPS9P82933 396 aaKnown RBP16.38■□□□□ 0.21
CHMP1A-210ENST00000551981 SART3Q15020 963 aaKnown RBP16.38■□□□□ 0.21
CHMP1A-210ENST00000551981 UTP14CQ5TAP6 766 aaKnown RBP16.38■□□□□ 0.21
CHMP1A-210ENST00000551981 TAF2Q6P1X5 1199 aa16.38■□□□□ 0.21
CHMP1A-210ENST00000551981 RPAINQ86UA6 219 aa16.38■□□□□ 0.21
CHMP1A-210ENST00000551981 ALYREFQ86V81 257 aaKnown RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms