RNA–Protein interactions for RNA: ENST00000551483.5

CNOT2-231, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 2 BASIC

Gene CNOT2, Length 4,753 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-231	ENST00000551483	ADAMTS1	Q9UHI8	967 aa		4.26	□□□□□ -1.73
CNOT2-231	ENST00000551483	PCDHGC5	Q9Y5F6	944 aa		4.26	□□□□□ -1.73
CNOT2-231	ENST00000551483	TRAV6	A0A075B6T7	132 aa		4.26	□□□□□ -1.73
CNOT2-231	ENST00000551483		A0A0G2JPF8	293 aa		4.26	□□□□□ -1.73
CNOT2-231	ENST00000551483	C17orf113	A0A1B0GUU1	675 aa		4.26	□□□□□ -1.73
CNOT2-231	ENST00000551483	GOLGA8IP	A6NC78	632 aa		4.26	□□□□□ -1.73
CNOT2-231	ENST00000551483	HNRNPCL3	B7ZW38	293 aa		4.26	□□□□□ -1.73
CNOT2-231	ENST00000551483	PLOD2	O00469	737 aa		4.26	□□□□□ -1.73
CNOT2-231	ENST00000551483	ENC1	O14682	589 aa		4.26	□□□□□ -1.73
CNOT2-231	ENST00000551483	SEC31A	O94979	1220 aa	Known RBP	4.26	□□□□□ -1.73
CNOT2-231	ENST00000551483	SEC24B	O95487	1268 aa		4.26	□□□□□ -1.73
CNOT2-231	ENST00000551483	HEXB	P07686	556 aa		4.26	□□□□□ -1.73
CNOT2-231	ENST00000551483	HNRNPCL4	P0DMR1	293 aa		4.26	□□□□□ -1.73
CNOT2-231	ENST00000551483	PDE4A	P27815	886 aa		4.26	□□□□□ -1.73
CNOT2-231	ENST00000551483	MYL6	P60660	151 aa		4.26	□□□□□ -1.73
CNOT2-231	ENST00000551483	NCBP1	Q09161	790 aa	Known RBP	4.26	□□□□□ -1.73
CNOT2-231	ENST00000551483	TRPC3	Q13507	836 aa		4.26	□□□□□ -1.73
CNOT2-231	ENST00000551483	QPCT	Q16769	361 aa		4.26	□□□□□ -1.73
CNOT2-231	ENST00000551483	TSGA10IP	Q3SY00	556 aa		4.26	□□□□□ -1.73
CNOT2-231	ENST00000551483	LIN54	Q6MZP7	749 aa		4.26	□□□□□ -1.73
CNOT2-231	ENST00000551483	ABRAXAS1	Q6UWZ7	409 aa		4.26	□□□□□ -1.73
CNOT2-231	ENST00000551483	SLFN12	Q8IYM2	578 aa		4.26	□□□□□ -1.73
CNOT2-231	ENST00000551483	ANKRD35	Q8N283	1001 aa		4.26	□□□□□ -1.73
CNOT2-231	ENST00000551483	DDI1	Q8WTU0	396 aa		4.26	□□□□□ -1.73
CNOT2-231	ENST00000551483	DTNBP1	Q96EV8	351 aa		4.26	□□□□□ -1.73
CNOT2-231	ENST00000551483	ACAP3	Q96P50	834 aa		4.26	□□□□□ -1.73
CNOT2-231	ENST00000551483	MPHOSPH8	Q99549	860 aa		4.26	□□□□□ -1.73
CNOT2-231	ENST00000551483	DDX50	Q9BQ39	737 aa	Known RBP	4.26	□□□□□ -1.73
CNOT2-231	ENST00000551483	NTPCR	Q9BSD7	190 aa	Known RBP	4.26	□□□□□ -1.73
CNOT2-231	ENST00000551483	CRB3	Q9BUF7	120 aa		4.26	□□□□□ -1.73
CNOT2-231	ENST00000551483	ZFYVE28	Q9HCC9	887 aa		4.26	□□□□□ -1.73
CNOT2-231	ENST00000551483	ATP13A1	Q9HD20	1204 aa		4.26	□□□□□ -1.73
CNOT2-231	ENST00000551483	ABCB6	Q9NP58	842 aa		4.26	□□□□□ -1.73
CNOT2-231	ENST00000551483	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	4.26	□□□□□ -1.73
CNOT2-231	ENST00000551483	CRYL1	Q9Y2S2	319 aa		4.26	□□□□□ -1.73
CNOT2-231	ENST00000551483	TMED5	Q9Y3A6	229 aa		4.26	□□□□□ -1.73
CNOT2-231	ENST00000551483	ABCC9	O60706	1549 aa		4.26	□□□□□ -1.73
CNOT2-231	ENST00000551483	KANK1	Q14678	1352 aa		4.25	□□□□□ -1.73
CNOT2-231	ENST00000551483	USP17L15	C9J2P7	530 aa		4.25	□□□□□ -1.73
CNOT2-231	ENST00000551483	USP17L10	C9JJH3	530 aa		4.25	□□□□□ -1.73
CNOT2-231	ENST00000551483	USP17L13	C9JLJ4	530 aa		4.25	□□□□□ -1.73
CNOT2-231	ENST00000551483	USP17L12	C9JPN9	530 aa		4.25	□□□□□ -1.73
CNOT2-231	ENST00000551483	USP17L11	C9JVI0	530 aa		4.25	□□□□□ -1.73
CNOT2-231	ENST00000551483	USP17L21	D6R901	530 aa		4.25	□□□□□ -1.73
CNOT2-231	ENST00000551483	USP17L18	D6R9N7	530 aa		4.25	□□□□□ -1.73
CNOT2-231	ENST00000551483	USP17L22	D6RA61	530 aa		4.25	□□□□□ -1.73
CNOT2-231	ENST00000551483	USP17L17	D6RBQ6	530 aa		4.25	□□□□□ -1.73
CNOT2-231	ENST00000551483	USP17L19	D6RCP7	530 aa		4.25	□□□□□ -1.73
CNOT2-231	ENST00000551483	USP17L20	D6RJB6	530 aa		4.25	□□□□□ -1.73
CNOT2-231	ENST00000551483	INO80B-WBP1	J3KQ70	363 aa		4.25	□□□□□ -1.73
CNOT2-231	ENST00000551483	SLC7A4	O43246	635 aa		4.25	□□□□□ -1.73
CNOT2-231	ENST00000551483	HOXC11	O43248	304 aa	Predicted RBP	4.25	□□□□□ -1.73
CNOT2-231	ENST00000551483	CLTB	P09497	229 aa		4.25	□□□□□ -1.73
CNOT2-231	ENST00000551483	CES1	P23141	567 aa		4.25	□□□□□ -1.73
CNOT2-231	ENST00000551483	SFPQ	P23246	707 aa	Known RBP eCLIP	4.25	□□□□□ -1.73
CNOT2-231	ENST00000551483	ETV3	P41162	512 aa		4.25	□□□□□ -1.73
CNOT2-231	ENST00000551483	ETV1	P50549	477 aa		4.25	□□□□□ -1.73
CNOT2-231	ENST00000551483	REL	Q04864	619 aa	Predicted RBP	4.25	□□□□□ -1.73
CNOT2-231	ENST00000551483	TMEM62	Q0P6H9	643 aa		4.25	□□□□□ -1.73
CNOT2-231	ENST00000551483	USP17L24	Q0WX57	530 aa		4.25	□□□□□ -1.73
CNOT2-231	ENST00000551483	CUL2	Q13617	745 aa		4.25	□□□□□ -1.73
CNOT2-231	ENST00000551483	BYSL	Q13895	437 aa	Known RBP	4.25	□□□□□ -1.73
CNOT2-231	ENST00000551483	GRM3	Q14832	879 aa		4.25	□□□□□ -1.73
CNOT2-231	ENST00000551483	CLUL1	Q15846	466 aa		4.25	□□□□□ -1.73
CNOT2-231	ENST00000551483	CNNM4	Q6P4Q7	775 aa		4.25	□□□□□ -1.73
CNOT2-231	ENST00000551483	ZNF600	Q6ZNG1	722 aa		4.25	□□□□□ -1.73
CNOT2-231	ENST00000551483	MYCT1	Q8N699	235 aa		4.25	□□□□□ -1.73
CNOT2-231	ENST00000551483	PXYLP1	Q8TE99	480 aa		4.25	□□□□□ -1.73
CNOT2-231	ENST00000551483	RNF139	Q8WU17	664 aa		4.25	□□□□□ -1.73
CNOT2-231	ENST00000551483	HDAC2	Q92769	488 aa	Known RBP	4.25	□□□□□ -1.73
CNOT2-231	ENST00000551483	RIOK1	Q9BRS2	568 aa	Known RBP	4.25	□□□□□ -1.73
CNOT2-231	ENST00000551483	LSM14B	Q9BX40	385 aa	Known RBP	4.25	□□□□□ -1.73
CNOT2-231	ENST00000551483	DRC3	Q9H069	523 aa		4.25	□□□□□ -1.73
CNOT2-231	ENST00000551483	VPS11	Q9H270	941 aa		4.25	□□□□□ -1.73
CNOT2-231	ENST00000551483	LIN28A	Q9H9Z2	209 aa	Known RBP	4.25	□□□□□ -1.73
CNOT2-231	ENST00000551483	AKAP7	Q9P0M2	348 aa	Predicted RBP	4.25	□□□□□ -1.73
CNOT2-231	ENST00000551483	SIRPG	Q9P1W8	387 aa		4.25	□□□□□ -1.73
CNOT2-231	ENST00000551483	KRT87P	A6NCN2	255 aa		4.25	□□□□□ -1.73
CNOT2-231	ENST00000551483	GOLGA6L9	A6NEM1	432 aa		4.25	□□□□□ -1.73
CNOT2-231	ENST00000551483	MEN1	O00255	615 aa		4.25	□□□□□ -1.73
CNOT2-231	ENST00000551483	ABLIM1	O14639	778 aa		4.25	□□□□□ -1.73
CNOT2-231	ENST00000551483	ZEB2	O60315	1214 aa		4.25	□□□□□ -1.73
CNOT2-231	ENST00000551483	IDH1	O75874	414 aa	Known RBP	4.25	□□□□□ -1.73
CNOT2-231	ENST00000551483	LARGE1	O95461	756 aa		4.25	□□□□□ -1.73
CNOT2-231	ENST00000551483	ATP1A3	P13637	1013 aa		4.25	□□□□□ -1.73
CNOT2-231	ENST00000551483	HOXC12	P31275	282 aa		4.25	□□□□□ -1.73
CNOT2-231	ENST00000551483	CCT5	P48643	541 aa		4.25	□□□□□ -1.73
CNOT2-231	ENST00000551483	CSNK2B	P67870	215 aa		4.25	□□□□□ -1.73
CNOT2-231	ENST00000551483	CCNA1	P78396	465 aa		4.25	□□□□□ -1.73
CNOT2-231	ENST00000551483	DPYS	Q14117	519 aa		4.25	□□□□□ -1.73
CNOT2-231	ENST00000551483	PDE3A	Q14432	1141 aa		4.25	□□□□□ -1.73
CNOT2-231	ENST00000551483	VEPH1	Q14D04	833 aa		4.25	□□□□□ -1.73
CNOT2-231	ENST00000551483	MINDY4	Q4G0A6	757 aa		4.25	□□□□□ -1.73
CNOT2-231	ENST00000551483	DACT2	Q5SW24	774 aa		4.25	□□□□□ -1.73
CNOT2-231	ENST00000551483	KLC3	Q6P597	504 aa		4.25	□□□□□ -1.73
CNOT2-231	ENST00000551483	ISLR2	Q6UXK2	745 aa		4.25	□□□□□ -1.73
CNOT2-231	ENST00000551483	IKBIP	Q70UQ0	350 aa		4.25	□□□□□ -1.73
CNOT2-231	ENST00000551483	FAM186B	Q8IYM0	893 aa		4.25	□□□□□ -1.73
CNOT2-231	ENST00000551483	PIP4K2C	Q8TBX8	421 aa		4.25	□□□□□ -1.73
CNOT2-231	ENST00000551483	GTF3C2	Q8WUA4	911 aa	Predicted RBP	4.25	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms