RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 UTP14CQ5TAP6 766 aaKnown RBP13.86□□□□□ -0.19
TRAFD1-205ENST00000548277 KCNV1Q6PIU1 500 aa13.86□□□□□ -0.19
TRAFD1-205ENST00000548277 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.86□□□□□ -0.19
TRAFD1-205ENST00000548277 OSBPL3Q9H4L5 887 aa13.86□□□□□ -0.19
TRAFD1-205ENST00000548277 SENP2Q9HC62 589 aa13.86□□□□□ -0.19
TRAFD1-205ENST00000548277 SETD4Q9NVD3 440 aa13.86□□□□□ -0.19
TRAFD1-205ENST00000548277 HCN4Q9Y3Q4 1203 aa13.86□□□□□ -0.19
TRAFD1-205ENST00000548277 TELO2Q9Y4R8 837 aa13.86□□□□□ -0.19
TRAFD1-205ENST00000548277 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.85□□□□□ -0.19
TRAFD1-205ENST00000548277 PALM3A6NDB9 673 aaPredicted RBP13.85□□□□□ -0.19
TRAFD1-205ENST00000548277 H3BQ06 376 aaPredicted RBP13.85□□□□□ -0.19
TRAFD1-205ENST00000548277 NOP56O00567 594 aaKnown RBP13.85□□□□□ -0.19
TRAFD1-205ENST00000548277 IFIT3O14879 490 aaKnown RBP13.85□□□□□ -0.19
TRAFD1-205ENST00000548277 CSPG5O95196 566 aa13.85□□□□□ -0.19
TRAFD1-205ENST00000548277 LGALS2P05162 132 aa13.85□□□□□ -0.19
TRAFD1-205ENST00000548277 NUCB1Q02818 461 aa13.85□□□□□ -0.19
TRAFD1-205ENST00000548277 CYFIP1Q7L576 1253 aa13.85□□□□□ -0.19
TRAFD1-205ENST00000548277 SERINC5Q86VE9 423 aa13.85□□□□□ -0.19
TRAFD1-205ENST00000548277 EXOC6Q8TAG9 804 aa13.85□□□□□ -0.19
TRAFD1-205ENST00000548277 MTMR8Q96EF0 704 aa13.85□□□□□ -0.19
TRAFD1-205ENST00000548277 YME1L1Q96TA2 773 aa13.85□□□□□ -0.19
TRAFD1-205ENST00000548277 SUPT16HQ9Y5B9 1047 aaKnown RBP13.85□□□□□ -0.19
TRAFD1-205ENST00000548277 TRANK1O15050 2925 aa13.84□□□□□ -0.19
TRAFD1-205ENST00000548277 TRDNQ13061 729 aa13.84□□□□□ -0.19
TRAFD1-205ENST00000548277 GPM6BQ13491 265 aa13.84□□□□□ -0.19
TRAFD1-205ENST00000548277 EPC2Q52LR7 807 aa13.84□□□□□ -0.19
TRAFD1-205ENST00000548277 PLEKHG4Q58EX7 1191 aa13.84□□□□□ -0.19
TRAFD1-205ENST00000548277 PTCRAQ6ISU1 281 aaPredicted RBP13.84□□□□□ -0.19
TRAFD1-205ENST00000548277 TRIM50Q86XT4 487 aa13.84□□□□□ -0.19
TRAFD1-205ENST00000548277 FAM178BQ8IXR5 827 aa13.84□□□□□ -0.19
TRAFD1-205ENST00000548277 GJD3Q8N144 294 aa13.84□□□□□ -0.19
TRAFD1-205ENST00000548277 SEPT8Q92599 483 aa13.84□□□□□ -0.19
TRAFD1-205ENST00000548277 UIMC1Q96RL1 719 aa13.84□□□□□ -0.19
TRAFD1-205ENST00000548277 C11orf16Q9NQ32 467 aa13.84□□□□□ -0.19
TRAFD1-205ENST00000548277 MAP3K20Q9NYL2 800 aaKnown RBP13.84□□□□□ -0.19
TRAFD1-205ENST00000548277 RALGAPA2Q2PPJ7 1873 aa13.84□□□□□ -0.19
TRAFD1-205ENST00000548277 EMSYQ7Z589 1322 aa13.84□□□□□ -0.19
TRAFD1-205ENST00000548277 ERICH2A1L162 156 aa13.83□□□□□ -0.2
TRAFD1-205ENST00000548277 PI4K2BG5E9Z4 385 aa13.83□□□□□ -0.2
TRAFD1-205ENST00000548277 CYTH3O43739 400 aa13.83□□□□□ -0.2
TRAFD1-205ENST00000548277 TGFB3P10600 412 aa13.83□□□□□ -0.2
TRAFD1-205ENST00000548277 HOXD8P13378 290 aaPredicted RBP13.83□□□□□ -0.2
TRAFD1-205ENST00000548277 NT5C2P49902 561 aa13.83□□□□□ -0.2
TRAFD1-205ENST00000548277 MRPS9P82933 396 aaKnown RBP13.83□□□□□ -0.2
TRAFD1-205ENST00000548277 HTRA4P83105 476 aaPredicted RBP13.83□□□□□ -0.2
TRAFD1-205ENST00000548277 ARHGAP4P98171 946 aa13.83□□□□□ -0.2
TRAFD1-205ENST00000548277 GRM4Q14833 912 aa13.83□□□□□ -0.2
TRAFD1-205ENST00000548277 LEXMQ3ZCV2 418 aa13.83□□□□□ -0.2
TRAFD1-205ENST00000548277 RIOX1Q9H6W3 641 aa13.83□□□□□ -0.2
TRAFD1-205ENST00000548277 PNMA6FA0A0J9YX94 578 aa13.82□□□□□ -0.2
TRAFD1-205ENST00000548277 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.82□□□□□ -0.2
TRAFD1-205ENST00000548277 GPR37L1O60883 481 aa13.82□□□□□ -0.2
TRAFD1-205ENST00000548277 GHRHRQ02643 423 aa13.82□□□□□ -0.2
TRAFD1-205ENST00000548277 PTH1RQ03431 593 aa13.82□□□□□ -0.2
TRAFD1-205ENST00000548277 WTAPQ15007 396 aa13.82□□□□□ -0.2
TRAFD1-205ENST00000548277 PTPROQ16827 1216 aa13.82□□□□□ -0.2
TRAFD1-205ENST00000548277 TCEAL5Q5H9L2 206 aa13.82□□□□□ -0.2
TRAFD1-205ENST00000548277 TMEM192Q8IY95 271 aa13.82□□□□□ -0.2
TRAFD1-205ENST00000548277 BANK1Q8NDB2 785 aa13.82□□□□□ -0.2
TRAFD1-205ENST00000548277 TOP1MTQ969P6 601 aa13.82□□□□□ -0.2
TRAFD1-205ENST00000548277 MRPL38Q96DV4 380 aaKnown RBP13.82□□□□□ -0.2
TRAFD1-205ENST00000548277 IFIH1Q9BYX4 1025 aaKnown RBP13.82□□□□□ -0.2
TRAFD1-205ENST00000548277 TAF6LQ9Y6J9 622 aa13.82□□□□□ -0.2
TRAFD1-205ENST00000548277 CYP21A2P08686 494 aa13.81□□□□□ -0.2
TRAFD1-205ENST00000548277 SEMA3FQ13275 785 aa13.81□□□□□ -0.2
TRAFD1-205ENST00000548277 GNPTABQ3T906 1256 aa13.81□□□□□ -0.2
TRAFD1-205ENST00000548277 USP17L6PQ6QN14 398 aa13.81□□□□□ -0.2
TRAFD1-205ENST00000548277 SAMD3Q8N6K7 520 aa13.81□□□□□ -0.2
TRAFD1-205ENST00000548277 SMARCC2Q8TAQ2 1214 aa13.81□□□□□ -0.2
TRAFD1-205ENST00000548277 SP7Q8TDD2 431 aaPredicted RBP13.81□□□□□ -0.2
TRAFD1-205ENST00000548277 GPR20Q99678 358 aa13.81□□□□□ -0.2
TRAFD1-205ENST00000548277 USP26Q9BXU7 913 aa13.81□□□□□ -0.2
TRAFD1-205ENST00000548277 BDP1A6H8Y1 2624 aa13.81□□□□□ -0.2
TRAFD1-205ENST00000548277 EVPLQ92817 2033 aa13.81□□□□□ -0.2
TRAFD1-205ENST00000548277 GRXCR2A6NFK2 248 aa13.8□□□□□ -0.2
TRAFD1-205ENST00000548277 SPATA31C2B4DYI2 1134 aa13.8□□□□□ -0.2
TRAFD1-205ENST00000548277 H3BNC9 293 aa13.8□□□□□ -0.2
TRAFD1-205ENST00000548277 GNAT1P11488 350 aa13.8□□□□□ -0.2
TRAFD1-205ENST00000548277 MKRN4PQ13434 485 aaPredicted RBP13.8□□□□□ -0.2
TRAFD1-205ENST00000548277 NEDD9Q14511 834 aa13.8□□□□□ -0.2
TRAFD1-205ENST00000548277 CLUL1Q15846 466 aa13.8□□□□□ -0.2
TRAFD1-205ENST00000548277 RALYLQ86SE5 291 aaKnown RBP13.8□□□□□ -0.2
TRAFD1-205ENST00000548277 MYL10Q9BUA6 226 aa13.8□□□□□ -0.2
TRAFD1-205ENST00000548277 CLDND1Q9NY35 253 aa13.8□□□□□ -0.2
TRAFD1-205ENST00000548277 PKD2L1Q9P0L9 805 aa13.8□□□□□ -0.2
TRAFD1-205ENST00000548277 KIAA1671Q9BY89 1806 aa13.79□□□□□ -0.2
TRAFD1-205ENST00000548277 E7EWF7 191 aa13.79□□□□□ -0.2
TRAFD1-205ENST00000548277 FIBPO43427 364 aa13.79□□□□□ -0.2
TRAFD1-205ENST00000548277 CHRNA1P02708 482 aa13.79□□□□□ -0.2
TRAFD1-205ENST00000548277 GHRP10912 638 aa13.79□□□□□ -0.2
TRAFD1-205ENST00000548277 MARK3P27448 753 aa13.79□□□□□ -0.2
TRAFD1-205ENST00000548277 HOXD11P31277 338 aaPredicted RBP13.79□□□□□ -0.2
TRAFD1-205ENST00000548277 ICAM3P32942 547 aa13.79□□□□□ -0.2
TRAFD1-205ENST00000548277 CTNNB1P35222 781 aa13.79□□□□□ -0.2
TRAFD1-205ENST00000548277 TRAF1Q13077 416 aa13.79□□□□□ -0.2
TRAFD1-205ENST00000548277 METTL7BQ6UX53 244 aa13.79□□□□□ -0.2
TRAFD1-205ENST00000548277 RUFY4Q6ZNE9 571 aa13.79□□□□□ -0.2
TRAFD1-205ENST00000548277 CATIPQ7Z7H3 387 aa13.79□□□□□ -0.2
TRAFD1-205ENST00000548277 FIBCD1Q8N539 461 aa13.79□□□□□ -0.2
TRAFD1-205ENST00000548277 NCOA7Q8NI08 942 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms