RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 PNMA3Q9UL41 463 aa14.99□□□□□ -0.01
PTCH1-215ENST00000547672 ZNF214Q9UL59 606 aaPredicted RBP14.99□□□□□ -0.01
PTCH1-215ENST00000547672 AGTPBP1Q9UPW5 1226 aa14.99□□□□□ -0.01
PTCH1-215ENST00000547672 MYMKA6NI61 221 aa14.98□□□□□ -0.01
PTCH1-215ENST00000547672 SPDYE16A6NNV3 312 aaPredicted RBP14.98□□□□□ -0.01
PTCH1-215ENST00000547672 SSBP05455 408 aaKnown RBP eCLIP14.98□□□□□ -0.01
PTCH1-215ENST00000547672 PRKCSHP14314 528 aaPredicted RBP14.98□□□□□ -0.01
PTCH1-215ENST00000547672 CCNE1P24864 410 aa14.98□□□□□ -0.01
PTCH1-215ENST00000547672 CASP1P29466 404 aa14.98□□□□□ -0.01
PTCH1-215ENST00000547672 MTMR1Q13613 665 aa14.98□□□□□ -0.01
PTCH1-215ENST00000547672 PLS1Q14651 629 aa14.98□□□□□ -0.01
PTCH1-215ENST00000547672 TMEM132BQ14DG7 1078 aa14.98□□□□□ -0.01
PTCH1-215ENST00000547672 PGM5Q15124 567 aa14.98□□□□□ -0.01
PTCH1-215ENST00000547672 GNPTABQ3T906 1256 aa14.98□□□□□ -0.01
PTCH1-215ENST00000547672 VSIG10LQ86VR7 867 aa14.98□□□□□ -0.01
PTCH1-215ENST00000547672 RIOX2Q8IUF8 465 aa14.98□□□□□ -0.01
PTCH1-215ENST00000547672 GUF1Q8N442 669 aaKnown RBP14.98□□□□□ -0.01
PTCH1-215ENST00000547672 CCDC150Q8NCX0 1101 aa14.98□□□□□ -0.01
PTCH1-215ENST00000547672 OTUD5Q96G74 571 aa14.98□□□□□ -0.01
PTCH1-215ENST00000547672 TSG101Q99816 390 aa14.98□□□□□ -0.01
PTCH1-215ENST00000547672 HSD17B14Q9BPX1 270 aa14.98□□□□□ -0.01
PTCH1-215ENST00000547672 PDCD2LQ9BRP1 358 aa14.98□□□□□ -0.01
PTCH1-215ENST00000547672 XPO4Q9C0E2 1151 aaKnown RBP14.98□□□□□ -0.01
PTCH1-215ENST00000547672 PANK4Q9NVE7 773 aa14.98□□□□□ -0.01
PTCH1-215ENST00000547672 ADD3Q9UEY8 706 aaKnown RBP14.98□□□□□ -0.01
PTCH1-215ENST00000547672 CTNND2Q9UQB3 1225 aa14.98□□□□□ -0.01
PTCH1-215ENST00000547672 WDR90Q96KV7 1748 aa14.97□□□□□ -0.01
PTCH1-215ENST00000547672 LRRC10BA6NIK2 292 aa14.97□□□□□ -0.01
PTCH1-215ENST00000547672 IRF6O14896 467 aa14.97□□□□□ -0.01
PTCH1-215ENST00000547672 P4HBP07237 508 aaKnown RBP14.97□□□□□ -0.01
PTCH1-215ENST00000547672 TPM1P09493 284 aa14.97□□□□□ -0.01
PTCH1-215ENST00000547672 IDEP14735 1019 aa14.97□□□□□ -0.01
PTCH1-215ENST00000547672 GAP43P17677 238 aa14.97□□□□□ -0.01
PTCH1-215ENST00000547672 EEF1GP26641 437 aaKnown RBP14.97□□□□□ -0.01
PTCH1-215ENST00000547672 JAK3P52333 1124 aa14.97□□□□□ -0.01
PTCH1-215ENST00000547672 KRT76Q01546 638 aa14.97□□□□□ -0.01
PTCH1-215ENST00000547672 FMR1Q06787 632 aaKnown RBP eCLIP14.97□□□□□ -0.012e-7■■■■■ 26.8
PTCH1-215ENST00000547672 STXBP4Q6ZWJ1 553 aa14.97□□□□□ -0.01
PTCH1-215ENST00000547672 CCDC186Q7Z3E2 898 aa14.97□□□□□ -0.01
PTCH1-215ENST00000547672 GPBP1Q86WP2 473 aa14.97□□□□□ -0.01
PTCH1-215ENST00000547672 CYP2W1Q8TAV3 490 aa14.97□□□□□ -0.01
PTCH1-215ENST00000547672 TAAR1Q96RJ0 339 aa14.97□□□□□ -0.01
PTCH1-215ENST00000547672 AGO4Q9HCK5 861 aaKnown RBP14.97□□□□□ -0.01
PTCH1-215ENST00000547672 KCNH7Q9NS40 1196 aa14.97□□□□□ -0.01
PTCH1-215ENST00000547672 RBBP6Q7Z6E9 1792 aaKnown RBP14.96□□□□□ -0.01
PTCH1-215ENST00000547672 LOC102724159A0A0B4J2E5 919 aa14.96□□□□□ -0.01
PTCH1-215ENST00000547672 POTEB3A0JP26 581 aa14.96□□□□□ -0.01
PTCH1-215ENST00000547672 POTECB2RU33 542 aa14.96□□□□□ -0.01
PTCH1-215ENST00000547672 MED24O75448 989 aa14.96□□□□□ -0.01
PTCH1-215ENST00000547672 NR3C2P08235 984 aa14.96□□□□□ -0.01
PTCH1-215ENST00000547672 SPATA31C1P0DKV0 1188 aa14.96□□□□□ -0.01
PTCH1-215ENST00000547672 MYCLP12524 364 aaPredicted RBP14.96□□□□□ -0.01
PTCH1-215ENST00000547672 CD44P16070 742 aaKnown RBP14.96□□□□□ -0.01
PTCH1-215ENST00000547672 LRRC63Q05C16 580 aa14.96□□□□□ -0.01
PTCH1-215ENST00000547672 PWP2Q15269 919 aaKnown RBP14.96□□□□□ -0.01
PTCH1-215ENST00000547672 CDKAL1Q5VV42 579 aa14.96□□□□□ -0.01
PTCH1-215ENST00000547672 POTEBQ6S5H4 581 aa14.96□□□□□ -0.01
PTCH1-215ENST00000547672 MIER3Q7Z3K6 550 aa14.96□□□□□ -0.01
PTCH1-215ENST00000547672 ANKRD35Q8N283 1001 aa14.96□□□□□ -0.01
PTCH1-215ENST00000547672 C2orf69Q8N8R5 385 aa14.96□□□□□ -0.01
PTCH1-215ENST00000547672 P2RX5Q93086 422 aa14.96□□□□□ -0.01
PTCH1-215ENST00000547672 NUDT12Q9BQG2 462 aa14.96□□□□□ -0.01
PTCH1-215ENST00000547672 TIPINQ9BVW5 301 aa14.96□□□□□ -0.01
PTCH1-215ENST00000547672 ZSWIM4Q9H7M6 989 aa14.96□□□□□ -0.01
PTCH1-215ENST00000547672 CYP39A1Q9NYL5 469 aa14.96□□□□□ -0.01
PTCH1-215ENST00000547672 LIMA1Q9UHB6 759 aaKnown RBP14.96□□□□□ -0.01
PTCH1-215ENST00000547672 FZD1Q9UP38 647 aa14.96□□□□□ -0.01
PTCH1-215ENST00000547672 SLC45A1Q9Y2W3 748 aa14.96□□□□□ -0.01
PTCH1-215ENST00000547672 COL4A3BPQ9Y5P4 624 aa14.96□□□□□ -0.01
PTCH1-215ENST00000547672 PARP14Q460N5 1801 aa14.95□□□□□ -0.02
PTCH1-215ENST00000547672 ZNF500O60304 480 aaPredicted RBP14.95□□□□□ -0.02
PTCH1-215ENST00000547672 ARP10275 920 aa14.95□□□□□ -0.02
PTCH1-215ENST00000547672 CETPP11597 493 aa14.95□□□□□ -0.02
PTCH1-215ENST00000547672 ITGB5P18084 799 aa14.95□□□□□ -0.02
PTCH1-215ENST00000547672 EIF2AK2P19525 551 aaKnown RBP14.95□□□□□ -0.02
PTCH1-215ENST00000547672 SLC12A3P55017 1021 aa14.95□□□□□ -0.02
PTCH1-215ENST00000547672 STXBP2Q15833 593 aa14.95□□□□□ -0.02
PTCH1-215ENST00000547672 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.95□□□□□ -0.02
PTCH1-215ENST00000547672 DYMQ7RTS9 669 aa14.95□□□□□ -0.02
PTCH1-215ENST00000547672 TPH2Q8IWU9 490 aa14.95□□□□□ -0.02
PTCH1-215ENST00000547672 MYOCDQ8IZQ8 938 aa14.95□□□□□ -0.02
PTCH1-215ENST00000547672 OPTNQ96CV9 577 aa14.95□□□□□ -0.02
PTCH1-215ENST00000547672 TRIM47Q96LD4 638 aa14.95□□□□□ -0.02
PTCH1-215ENST00000547672 HSD3B7Q9H2F3 369 aa14.95□□□□□ -0.02
PTCH1-215ENST00000547672 COL20A1Q9P218 1284 aa14.95□□□□□ -0.02
PTCH1-215ENST00000547672 SEL1LQ9UBV2 794 aa14.95□□□□□ -0.02
PTCH1-215ENST00000547672 SMCHD1A6NHR9 2005 aa14.94□□□□□ -0.02
PTCH1-215ENST00000547672 E9PMD0 336 aa14.94□□□□□ -0.02
PTCH1-215ENST00000547672 TBCAO75347 108 aaKnown RBP14.94□□□□□ -0.02
PTCH1-215ENST00000547672 EIF3JO75822 258 aaKnown RBP14.94□□□□□ -0.02
PTCH1-215ENST00000547672 SLITRK3O94933 977 aa14.94□□□□□ -0.02
PTCH1-215ENST00000547672 LYPLA2O95372 231 aa14.94□□□□□ -0.02
PTCH1-215ENST00000547672 ATP1A3P13637 1013 aa14.94□□□□□ -0.02
PTCH1-215ENST00000547672 TAL1P17542 331 aaPredicted RBP14.94□□□□□ -0.02
PTCH1-215ENST00000547672 CYP11B2P19099 503 aa14.94□□□□□ -0.02
PTCH1-215ENST00000547672 GTF2A2P52657 109 aa14.94□□□□□ -0.02
PTCH1-215ENST00000547672 STX17P56962 302 aa14.94□□□□□ -0.02
PTCH1-215ENST00000547672 UBXN2AP68543 259 aa14.94□□□□□ -0.02
PTCH1-215ENST00000547672 CCNA1P78396 465 aa14.94□□□□□ -0.02
PTCH1-215ENST00000547672 DGKZQ13574 1117 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms