RNA–Protein interactions for RNA: ENST00000547208.5

BEST3-208, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 1,187 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-208ENST00000547208 XRRA1Q6P2D8 792 aa11.86□□□□□ -0.51
BEST3-208ENST00000547208 TRAF7Q6Q0C0 670 aa11.86□□□□□ -0.51
BEST3-208ENST00000547208 METTL7BQ6UX53 244 aa11.86□□□□□ -0.51
BEST3-208ENST00000547208 DEFB128Q7Z7B8 93 aa11.86□□□□□ -0.51
BEST3-208ENST00000547208 RPUSD2Q8IZ73 545 aaKnown RBP11.86□□□□□ -0.51
BEST3-208ENST00000547208 CUL5Q93034 780 aa11.86□□□□□ -0.51
BEST3-208ENST00000547208 WNT8BQ93098 351 aa11.86□□□□□ -0.51
BEST3-208ENST00000547208 TIFAQ96CG3 184 aa11.86□□□□□ -0.51
BEST3-208ENST00000547208 ALG1Q9BT22 464 aa11.86□□□□□ -0.51
BEST3-208ENST00000547208 KATNAL1Q9BW62 490 aa11.86□□□□□ -0.51
BEST3-208ENST00000547208 RBM28Q9NW13 759 aaKnown RBP11.86□□□□□ -0.51
BEST3-208ENST00000547208 NID2Q14112 1375 aa11.86□□□□□ -0.51
BEST3-208ENST00000547208 REV3LO60673 3130 aa11.86□□□□□ -0.51
BEST3-208ENST00000547208 TRANK1O15050 2925 aa11.86□□□□□ -0.51
BEST3-208ENST00000547208 COL4A4P53420 1690 aaPredicted RBP11.85□□□□□ -0.51
BEST3-208ENST00000547208 KLF18A0A0U1RQI7 1052 aa11.85□□□□□ -0.51
BEST3-208ENST00000547208 HMGB1P09429 215 aaKnown RBP11.85□□□□□ -0.51
BEST3-208ENST00000547208 ITGB5P18084 799 aa11.85□□□□□ -0.51
BEST3-208ENST00000547208 COL9A1P20849 921 aa11.85□□□□□ -0.51
BEST3-208ENST00000547208 RCAN1P53805 252 aa11.85□□□□□ -0.51
BEST3-208ENST00000547208 ZNF200P98182 395 aaPredicted RBP11.85□□□□□ -0.51
BEST3-208ENST00000547208 BFSP2Q13515 415 aa11.85□□□□□ -0.51
BEST3-208ENST00000547208 SYNE3Q6ZMZ3 975 aa11.85□□□□□ -0.51
BEST3-208ENST00000547208 HEATR3Q7Z4Q2 680 aa11.85□□□□□ -0.51
BEST3-208ENST00000547208 FBXL16Q8N461 479 aa11.85□□□□□ -0.51
BEST3-208ENST00000547208 C7orf31Q8N865 590 aa11.85□□□□□ -0.51
BEST3-208ENST00000547208 CAGE1Q8TC20 777 aa11.85□□□□□ -0.51
BEST3-208ENST00000547208 GPR20Q99678 358 aa11.85□□□□□ -0.51
BEST3-208ENST00000547208 AGXT2Q9BYV1 514 aa11.85□□□□□ -0.51
BEST3-208ENST00000547208 ZNF576Q9H609 170 aa11.85□□□□□ -0.51
BEST3-208ENST00000547208 MLXIPQ9HAP2 919 aa11.85□□□□□ -0.51
BEST3-208ENST00000547208 NOD1Q9Y239 953 aa11.85□□□□□ -0.51
BEST3-208ENST00000547208 YBX2Q9Y2T7 364 aaKnown RBP11.85□□□□□ -0.51
BEST3-208ENST00000547208 GOLGA8AA7E2F4 631 aa11.84□□□□□ -0.51
BEST3-208ENST00000547208 GOLGA8BA8MQT2 603 aa11.84□□□□□ -0.51
BEST3-208ENST00000547208 H3BRB1 525 aa11.84□□□□□ -0.51
BEST3-208ENST00000547208 STXBP3O00186 592 aa11.84□□□□□ -0.51
BEST3-208ENST00000547208 ATP9AO75110 1047 aa11.84□□□□□ -0.51
BEST3-208ENST00000547208 LGALS2P05162 132 aa11.84□□□□□ -0.51
BEST3-208ENST00000547208 CKBP12277 381 aa11.84□□□□□ -0.51
BEST3-208ENST00000547208 KCNA2P16389 499 aa11.84□□□□□ -0.51
BEST3-208ENST00000547208 NEDD9Q14511 834 aa11.84□□□□□ -0.51
BEST3-208ENST00000547208 CYFIP1Q7L576 1253 aa11.84□□□□□ -0.51
BEST3-208ENST00000547208 RETREG2Q8NC44 543 aa11.84□□□□□ -0.51
BEST3-208ENST00000547208 AFAP1L1Q8TED9 768 aa11.84□□□□□ -0.51
BEST3-208ENST00000547208 GPRASP2Q96D09 838 aa11.84□□□□□ -0.51
BEST3-208ENST00000547208 JAKMIP1Q96N16 626 aaKnown RBP11.84□□□□□ -0.51
BEST3-208ENST00000547208 SENP7Q9BQF6 1050 aa11.84□□□□□ -0.51
BEST3-208ENST00000547208 MTIF3Q9H2K0 278 aaKnown RBP11.84□□□□□ -0.51
BEST3-208ENST00000547208 TUT1Q9H6E5 874 aaKnown RBP11.84□□□□□ -0.51
BEST3-208ENST00000547208 PCDHA6Q9UN73 950 aa11.84□□□□□ -0.51
BEST3-208ENST00000547208 PCDHA8Q9Y5H6 950 aa11.84□□□□□ -0.51
BEST3-208ENST00000547208 UBIAD1Q9Y5Z9 338 aa11.84□□□□□ -0.51
BEST3-208ENST00000547208 SLC4A7Q9Y6M7 1214 aa11.84□□□□□ -0.51
BEST3-208ENST00000547208 V9GY48 417 aaPredicted RBP11.84□□□□□ -0.51
BEST3-208ENST00000547208 MYH9P35579 1960 aaKnown RBP11.83□□□□□ -0.52
BEST3-208ENST00000547208 NBNO60934 754 aa11.83□□□□□ -0.52
BEST3-208ENST00000547208 MYOGP15173 224 aa11.83□□□□□ -0.52
BEST3-208ENST00000547208 SELPP16109 830 aa11.83□□□□□ -0.52
BEST3-208ENST00000547208 RPS6KB1P23443 525 aa11.83□□□□□ -0.52
BEST3-208ENST00000547208 ADD1P35611 737 aaKnown RBP11.83□□□□□ -0.52
BEST3-208ENST00000547208 VASPP50552 380 aaPredicted RBP11.83□□□□□ -0.52
BEST3-208ENST00000547208 RABGGTBP53611 331 aa11.83□□□□□ -0.52
BEST3-208ENST00000547208 APOBRQ0VD83 1088 aa11.83□□□□□ -0.52
BEST3-208ENST00000547208 PTK7Q13308 1070 aa11.83□□□□□ -0.52
BEST3-208ENST00000547208 TCTN1Q2MV58 587 aa11.83□□□□□ -0.52
BEST3-208ENST00000547208 PPP1R18Q6NYC8 613 aa11.83□□□□□ -0.52
BEST3-208ENST00000547208 BLOC1S2Q6QNY1 142 aa11.83□□□□□ -0.52
BEST3-208ENST00000547208 Q6ZUG5 572 aa11.83□□□□□ -0.52
BEST3-208ENST00000547208 LRRC8DQ7L1W4 858 aa11.83□□□□□ -0.52
BEST3-208ENST00000547208 SERINC5Q86VE9 423 aa11.83□□□□□ -0.52
BEST3-208ENST00000547208 TRIM50Q86XT4 487 aa11.83□□□□□ -0.52
BEST3-208ENST00000547208 PLCD3Q8N3E9 789 aa11.83□□□□□ -0.52
BEST3-208ENST00000547208 CCDC155Q8N6L0 562 aa11.83□□□□□ -0.52
BEST3-208ENST00000547208 PPM1EQ8WY54 764 aa11.83□□□□□ -0.52
BEST3-208ENST00000547208 BRF1Q92994 677 aa11.83□□□□□ -0.52
BEST3-208ENST00000547208 RIC8AQ9NPQ8 531 aa11.83□□□□□ -0.52
BEST3-208ENST00000547208 BARHL2Q9NY43 387 aa11.83□□□□□ -0.52
BEST3-208ENST00000547208 NLRC5Q86WI3 1866 aa11.83□□□□□ -0.52
BEST3-208ENST00000547208 SPDYE3A6NKU9 549 aa11.82□□□□□ -0.52
BEST3-208ENST00000547208 ZBBXA8MT70 800 aa11.82□□□□□ -0.52
BEST3-208ENST00000547208 hCG_1984214I3L0E3 225 aa11.82□□□□□ -0.52
BEST3-208ENST00000547208 NOP56O00567 594 aaKnown RBP11.82□□□□□ -0.52
BEST3-208ENST00000547208 ADAMTS3O15072 1205 aa11.82□□□□□ -0.52
BEST3-208ENST00000547208 EPB41L2O43491 1005 aaKnown RBP11.82□□□□□ -0.52
BEST3-208ENST00000547208 REC8O95072 547 aa11.82□□□□□ -0.52
BEST3-208ENST00000547208 CXCL10P02778 98 aa11.82□□□□□ -0.52
BEST3-208ENST00000547208 SMIM10L2AP0DMW4 78 aa11.82□□□□□ -0.52
BEST3-208ENST00000547208 SMIM10L2BP0DMW5 78 aa11.82□□□□□ -0.52
BEST3-208ENST00000547208 FOSL2P15408 326 aa11.82□□□□□ -0.52
BEST3-208ENST00000547208 ATP2A2P16615 1042 aaKnown RBP11.82□□□□□ -0.52
BEST3-208ENST00000547208 CLK2P49760 499 aaKnown RBP11.82□□□□□ -0.52
BEST3-208ENST00000547208 NAPAP54920 295 aa11.82□□□□□ -0.52
BEST3-208ENST00000547208 EVCP57679 992 aa11.82□□□□□ -0.52
BEST3-208ENST00000547208 ADAM17P78536 824 aa11.82□□□□□ -0.52
BEST3-208ENST00000547208 MBTPS1Q14703 1052 aa11.82□□□□□ -0.52
BEST3-208ENST00000547208 RAB30Q15771 203 aa11.82□□□□□ -0.52
BEST3-208ENST00000547208 NLRX1Q86UT6 975 aa11.82□□□□□ -0.52
BEST3-208ENST00000547208 TEX2Q8IWB9 1127 aa11.82□□□□□ -0.52
BEST3-208ENST00000547208 ZNF713Q8N859 430 aaPredicted RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms