RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 TSGA10IPQ3SY00 556 aa9.41□□□□□ -0.9
CLIP1-218ENST00000545889 ASPRV1Q53RT3 343 aa9.41□□□□□ -0.9
CLIP1-218ENST00000545889 ANO1Q5XXA6 986 aa9.41□□□□□ -0.9
CLIP1-218ENST00000545889 PDXDC2PQ6P474 469 aa9.41□□□□□ -0.9
CLIP1-218ENST00000545889 NWD2Q9ULI1 1742 aa9.41□□□□□ -0.9
CLIP1-218ENST00000545889 KCNJ6P48051 423 aa9.41□□□□□ -0.9
CLIP1-218ENST00000545889 CLNS1AP54105 237 aaKnown RBP9.41□□□□□ -0.9
CLIP1-218ENST00000545889 PLCB4Q15147 1175 aa9.41□□□□□ -0.9
CLIP1-218ENST00000545889 DACT2Q5SW24 774 aa9.41□□□□□ -0.9
CLIP1-218ENST00000545889 RNF187Q5TA31 235 aaPredicted RBP9.41□□□□□ -0.9
CLIP1-218ENST00000545889 SEL1L2Q5TEA6 688 aa9.41□□□□□ -0.9
CLIP1-218ENST00000545889 PNMA8AQ86V59 439 aaPredicted RBP9.41□□□□□ -0.9
CLIP1-218ENST00000545889 GPBP1Q86WP2 473 aa9.41□□□□□ -0.9
CLIP1-218ENST00000545889 BLIDQ8IZY5 108 aa9.41□□□□□ -0.9
CLIP1-218ENST00000545889 CCDC127Q96BQ5 260 aa9.41□□□□□ -0.9
CLIP1-218ENST00000545889 GGA3Q9NZ52 723 aa9.41□□□□□ -0.9
CLIP1-218ENST00000545889 K7ENM7 598 aa9.41□□□□□ -0.9
CLIP1-218ENST00000545889 HNRNPDLO14979 420 aaKnown RBP9.41□□□□□ -0.9
CLIP1-218ENST00000545889 DLATP10515 647 aaKnown RBP9.41□□□□□ -0.9
CLIP1-218ENST00000545889 EIF2AK2P19525 551 aaKnown RBP9.41□□□□□ -0.9
CLIP1-218ENST00000545889 LMNB1P20700 586 aa9.41□□□□□ -0.9
CLIP1-218ENST00000545889 MIS18BP1Q6P0N0 1132 aa9.41□□□□□ -0.9
CLIP1-218ENST00000545889 NEK8Q86SG6 692 aa9.41□□□□□ -0.9
CLIP1-218ENST00000545889 DGKHQ86XP1 1220 aa9.41□□□□□ -0.9
CLIP1-218ENST00000545889 RYBPQ8N488 228 aaPredicted RBP9.41□□□□□ -0.9
CLIP1-218ENST00000545889 PGBD1Q96JS3 809 aa9.41□□□□□ -0.9
CLIP1-218ENST00000545889 SERPINA10Q9UK55 444 aa9.41□□□□□ -0.9
CLIP1-218ENST00000545889 EVCP57679 992 aa9.4□□□□□ -0.9
CLIP1-218ENST00000545889 PPP4CP60510 307 aa9.4□□□□□ -0.9
CLIP1-218ENST00000545889 PPP2R5CQ13362 524 aa9.4□□□□□ -0.9
CLIP1-218ENST00000545889 MYSM1Q5VVJ2 828 aa9.4□□□□□ -0.9
CLIP1-218ENST00000545889 CATSPER4Q7RTX7 472 aa9.4□□□□□ -0.9
CLIP1-218ENST00000545889 CEP112Q8N8E3 955 aa9.4□□□□□ -0.9
CLIP1-218ENST00000545889 FAM149B1Q96BN6 582 aa9.4□□□□□ -0.9
CLIP1-218ENST00000545889 KCNH3Q9ULD8 1083 aa9.4□□□□□ -0.9
CLIP1-218ENST00000545889 SLC8A2Q9UPR5 921 aa9.4□□□□□ -0.9
CLIP1-218ENST00000545889 ABCA3Q99758 1704 aa9.4□□□□□ -0.9
CLIP1-218ENST00000545889 USP17L10C9JJH3 530 aa9.4□□□□□ -0.9
CLIP1-218ENST00000545889 IFNAR1P17181 557 aa9.4□□□□□ -0.9
CLIP1-218ENST00000545889 PSMC4P43686 418 aa9.4□□□□□ -0.9
CLIP1-218ENST00000545889 ATL3Q6DD88 541 aa9.4□□□□□ -0.9
CLIP1-218ENST00000545889 NBPF11Q86T75 865 aa9.4□□□□□ -0.9
CLIP1-218ENST00000545889 STAG2Q8N3U4 1231 aa9.4□□□□□ -0.9
CLIP1-218ENST00000545889 CEP170P1Q96L14 293 aa9.4□□□□□ -0.9
CLIP1-218ENST00000545889 ZNF577Q9BSK1 485 aa9.4□□□□□ -0.9
CLIP1-218ENST00000545889 KCNF1Q9H3M0 494 aa9.4□□□□□ -0.9
CLIP1-218ENST00000545889 CLSTN2Q9H4D0 955 aa9.4□□□□□ -0.9
CLIP1-218ENST00000545889 ZFYVE28Q9HCC9 887 aa9.4□□□□□ -0.9
CLIP1-218ENST00000545889 FAM205AQ6ZU69 1335 aa9.4□□□□□ -0.9
CLIP1-218ENST00000545889 SHTN1A0MZ66 631 aa9.4□□□□□ -0.91
CLIP1-218ENST00000545889 POLR2DO15514 142 aaKnown RBP9.4□□□□□ -0.91
CLIP1-218ENST00000545889 RASA1P20936 1047 aa9.4□□□□□ -0.91
CLIP1-218ENST00000545889 CCND2P30279 289 aa9.4□□□□□ -0.91
CLIP1-218ENST00000545889 SCYL2Q6P3W7 929 aa9.4□□□□□ -0.91
CLIP1-218ENST00000545889 CCDC25Q86WR0 208 aa9.4□□□□□ -0.91
CLIP1-218ENST00000545889 IGDCC4Q8TDY8 1250 aa9.4□□□□□ -0.91
CLIP1-218ENST00000545889 CARD6Q9BX69 1037 aa9.4□□□□□ -0.91
CLIP1-218ENST00000545889 MIS12Q9H081 205 aa9.4□□□□□ -0.91
CLIP1-218ENST00000545889 INPP5FQ9Y2H2 1132 aa9.4□□□□□ -0.91
CLIP1-218ENST00000545889 MYH14Q7Z406 1995 aaKnown RBP9.4□□□□□ -0.91
CLIP1-218ENST00000545889 ELP1O95163 1332 aa9.4□□□□□ -0.91
CLIP1-218ENST00000545889 CAPN15O75808 1086 aa9.4□□□□□ -0.91
CLIP1-218ENST00000545889 TMEM179Q6ZVK1 233 aa9.4□□□□□ -0.91
CLIP1-218ENST00000545889 ZFPM1Q8IX07 1006 aa9.4□□□□□ -0.91
CLIP1-218ENST00000545889 ZNF513Q8N8E2 541 aaPredicted RBP9.4□□□□□ -0.91
CLIP1-218ENST00000545889 POMGNT1Q8WZA1 660 aa9.4□□□□□ -0.91
CLIP1-218ENST00000545889 DNAJC25Q9H1X3 360 aa9.4□□□□□ -0.91
CLIP1-218ENST00000545889 KIF9Q9HAQ2 790 aa9.4□□□□□ -0.91
CLIP1-218ENST00000545889 DDX4Q9NQI0 724 aaKnown RBP9.4□□□□□ -0.91
CLIP1-218ENST00000545889 CTTNBP2NLQ9P2B4 639 aa9.4□□□□□ -0.91
CLIP1-218ENST00000545889 DDTLA6NHG4 134 aaPredicted RBP9.39□□□□□ -0.91
CLIP1-218ENST00000545889 KBTBD13C9JR72 458 aa9.39□□□□□ -0.91
CLIP1-218ENST00000545889 EBAG9O00559 213 aa9.39□□□□□ -0.91
CLIP1-218ENST00000545889 TNNC1P63316 161 aa9.39□□□□□ -0.91
CLIP1-218ENST00000545889 LACTBP83111 547 aaPredicted RBP9.39□□□□□ -0.91
CLIP1-218ENST00000545889 ITKQ08881 620 aa9.39□□□□□ -0.91
CLIP1-218ENST00000545889 ARHGAP44Q17R89 818 aa9.39□□□□□ -0.91
CLIP1-218ENST00000545889 ZNF569Q5MCW4 686 aa9.39□□□□□ -0.91
CLIP1-218ENST00000545889 PACS2Q86VP3 889 aa9.39□□□□□ -0.91
CLIP1-218ENST00000545889 BBS5Q8N3I7 341 aa9.39□□□□□ -0.91
CLIP1-218ENST00000545889 NEDD1Q8NHV4 660 aa9.39□□□□□ -0.91
CLIP1-218ENST00000545889 PARD3BQ8TEW8 1205 aa9.39□□□□□ -0.91
CLIP1-218ENST00000545889 PPP1R16BQ96T49 567 aa9.39□□□□□ -0.91
CLIP1-218ENST00000545889 DDX25Q9UHL0 483 aaKnown RBP9.39□□□□□ -0.91
CLIP1-218ENST00000545889 ADAM21Q9UKJ8 722 aa9.39□□□□□ -0.91
CLIP1-218ENST00000545889 COL4A3BPQ9Y5P4 624 aa9.39□□□□□ -0.91
CLIP1-218ENST00000545889 ORC4O43929 436 aa9.39□□□□□ -0.91
CLIP1-218ENST00000545889 CELF2O95319 508 aaKnown RBP9.39□□□□□ -0.91
CLIP1-218ENST00000545889 CUL4BQ13620 913 aa9.39□□□□□ -0.91
CLIP1-218ENST00000545889 MAP7D1Q3KQU3 841 aa9.39□□□□□ -0.91
CLIP1-218ENST00000545889 N4BP2L2Q92802 583 aaPredicted RBP9.39□□□□□ -0.91
CLIP1-218ENST00000545889 CEP63Q96MT8 703 aa9.39□□□□□ -0.91
CLIP1-218ENST00000545889 C1orf112Q9NSG2 853 aa9.39□□□□□ -0.91
CLIP1-218ENST00000545889 DENND3A2RUS2 1198 aa9.39□□□□□ -0.91
CLIP1-218ENST00000545889 SBK1Q52WX2 424 aa9.39□□□□□ -0.91
CLIP1-218ENST00000545889 SYDE2Q5VT97 1194 aa9.39□□□□□ -0.91
CLIP1-218ENST00000545889 ZNF365Q70YC5 407 aa9.39□□□□□ -0.91
CLIP1-218ENST00000545889 TRIM50Q86XT4 487 aa9.39□□□□□ -0.91
CLIP1-218ENST00000545889 NOSTRINQ8IVI9 506 aa9.39□□□□□ -0.91
CLIP1-218ENST00000545889 DDX23Q9BUQ8 820 aaKnown RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms