RNA–Protein interactions for RNA: ENST00000544373.5

CHEK1-218, Transcript of checkpoint kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CHEK1, Length 1,653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-218ENST00000544373 XRRA1Q6P2D8 792 aa12.3□□□□□ -0.44
CHEK1-218ENST00000544373 RETREG2Q8NC44 543 aa12.3□□□□□ -0.44
CHEK1-218ENST00000544373 PGBD1Q96JS3 809 aa12.3□□□□□ -0.44
CHEK1-218ENST00000544373 GPR20Q99678 358 aa12.3□□□□□ -0.44
CHEK1-218ENST00000544373 PCDHA6Q9UN73 950 aa12.3□□□□□ -0.44
CHEK1-218ENST00000544373 YBX2Q9Y2T7 364 aaKnown RBP12.3□□□□□ -0.44
CHEK1-218ENST00000544373 PCDHA8Q9Y5H6 950 aa12.3□□□□□ -0.44
CHEK1-218ENST00000544373 KIAA1217Q5T5P2 1943 aa12.3□□□□□ -0.44
CHEK1-218ENST00000544373 ZBBXA8MT70 800 aa12.29□□□□□ -0.44
CHEK1-218ENST00000544373 ADAMTS3O15072 1205 aa12.29□□□□□ -0.44
CHEK1-218ENST00000544373 MYOGP15173 224 aa12.29□□□□□ -0.44
CHEK1-218ENST00000544373 NAPAP54920 295 aa12.29□□□□□ -0.44
CHEK1-218ENST00000544373 FGD1P98174 961 aa12.29□□□□□ -0.44
CHEK1-218ENST00000544373 BFSP2Q13515 415 aa12.29□□□□□ -0.44
CHEK1-218ENST00000544373 NEDD9Q14511 834 aa12.29□□□□□ -0.44
CHEK1-218ENST00000544373 TRIM71Q2Q1W2 868 aaKnown RBP12.29□□□□□ -0.44
CHEK1-218ENST00000544373 BLOC1S2Q6QNY1 142 aa12.29□□□□□ -0.44
CHEK1-218ENST00000544373 METTL7BQ6UX53 244 aa12.29□□□□□ -0.44
CHEK1-218ENST00000544373 TRIM50Q86XT4 487 aa12.29□□□□□ -0.44
CHEK1-218ENST00000544373 CYP2W1Q8TAV3 490 aa12.29□□□□□ -0.44
CHEK1-218ENST00000544373 KATNAL1Q9BW62 490 aa12.29□□□□□ -0.44
CHEK1-218ENST00000544373 ZNF576Q9H609 170 aa12.29□□□□□ -0.44
CHEK1-218ENST00000544373 PKD2L1Q9P0L9 805 aa12.29□□□□□ -0.44
CHEK1-218ENST00000544373 SLC4A7Q9Y6M7 1214 aa12.29□□□□□ -0.44
CHEK1-218ENST00000544373 TMEM265A0A087WTH1 108 aa12.29□□□□□ -0.44
CHEK1-218ENST00000544373 SPDYE3A6NKU9 549 aa12.29□□□□□ -0.44
CHEK1-218ENST00000544373 H3BRB1 525 aa12.29□□□□□ -0.44
CHEK1-218ENST00000544373 STXBP3O00186 592 aa12.29□□□□□ -0.44
CHEK1-218ENST00000544373 NOP56O00567 594 aaKnown RBP12.29□□□□□ -0.44
CHEK1-218ENST00000544373 CKBP12277 381 aa12.29□□□□□ -0.44
CHEK1-218ENST00000544373 RPS6KB1P23443 525 aa12.29□□□□□ -0.44
CHEK1-218ENST00000544373 TCTN1Q2MV58 587 aa12.29□□□□□ -0.44
CHEK1-218ENST00000544373 TRAF7Q6Q0C0 670 aa12.29□□□□□ -0.44
CHEK1-218ENST00000544373 SENP7Q9BQF6 1050 aa12.29□□□□□ -0.44
CHEK1-218ENST00000544373 FTOQ9C0B1 505 aaKnown RBP eCLIP12.29□□□□□ -0.44
CHEK1-218ENST00000544373 TUT1Q9H6E5 874 aaKnown RBP12.29□□□□□ -0.44
CHEK1-218ENST00000544373 TMEM260Q9NX78 707 aa12.29□□□□□ -0.44
CHEK1-218ENST00000544373 UBIAD1Q9Y5Z9 338 aa12.29□□□□□ -0.44
CHEK1-218ENST00000544373 NBNO60934 754 aa12.28□□□□□ -0.44
CHEK1-218ENST00000544373 REC8O95072 547 aa12.28□□□□□ -0.44
CHEK1-218ENST00000544373 SMIM10L2AP0DMW4 78 aa12.28□□□□□ -0.44
CHEK1-218ENST00000544373 SMIM10L2BP0DMW5 78 aa12.28□□□□□ -0.44
CHEK1-218ENST00000544373 SELPP16109 830 aa12.28□□□□□ -0.44
CHEK1-218ENST00000544373 KCNA2P16389 499 aa12.28□□□□□ -0.44
CHEK1-218ENST00000544373 RFC2P35250 354 aa12.28□□□□□ -0.44
CHEK1-218ENST00000544373 METAP2P50579 478 aaKnown RBP eCLIP12.28□□□□□ -0.44
CHEK1-218ENST00000544373 UTP14CQ5TAP6 766 aaKnown RBP12.28□□□□□ -0.44
CHEK1-218ENST00000544373 LRRC8DQ7L1W4 858 aa12.28□□□□□ -0.44
CHEK1-218ENST00000544373 NLRX1Q86UT6 975 aa12.28□□□□□ -0.44
CHEK1-218ENST00000544373 CAGE1Q8TC20 777 aa12.28□□□□□ -0.44
CHEK1-218ENST00000544373 AFAP1L1Q8TED9 768 aa12.28□□□□□ -0.44
CHEK1-218ENST00000544373 USP26Q9BXU7 913 aa12.28□□□□□ -0.44
CHEK1-218ENST00000544373 MTIF3Q9H2K0 278 aaKnown RBP12.28□□□□□ -0.44
CHEK1-218ENST00000544373 NKX2-4Q9H2Z4 354 aa12.28□□□□□ -0.44
CHEK1-218ENST00000544373 RNPEPQ9H4A4 650 aa12.28□□□□□ -0.44
CHEK1-218ENST00000544373 RIC8AQ9NPQ8 531 aa12.28□□□□□ -0.44
CHEK1-218ENST00000544373 BARHL2Q9NY43 387 aa12.28□□□□□ -0.44
CHEK1-218ENST00000544373 SMCO2A6NFE2 343 aa12.27□□□□□ -0.45
CHEK1-218ENST00000544373 TREHO43280 583 aa12.27□□□□□ -0.45
CHEK1-218ENST00000544373 PFKMP08237 780 aa12.27□□□□□ -0.45
CHEK1-218ENST00000544373 ATP2A2P16615 1042 aaKnown RBP12.27□□□□□ -0.45
CHEK1-218ENST00000544373 RCAN1P53805 252 aa12.27□□□□□ -0.45
CHEK1-218ENST00000544373 RBL2Q08999 1139 aa12.27□□□□□ -0.45
CHEK1-218ENST00000544373 PTK7Q13308 1070 aa12.27□□□□□ -0.45
CHEK1-218ENST00000544373 MBTPS1Q14703 1052 aa12.27□□□□□ -0.45
CHEK1-218ENST00000544373 PKN1Q16512 942 aa12.27□□□□□ -0.45
CHEK1-218ENST00000544373 ZNF618Q5T7W0 954 aa12.27□□□□□ -0.45
CHEK1-218ENST00000544373 FBXL16Q8N461 479 aa12.27□□□□□ -0.45
CHEK1-218ENST00000544373 PHKBQ93100 1093 aa12.27□□□□□ -0.45
CHEK1-218ENST00000544373 GPRASP2Q96D09 838 aa12.27□□□□□ -0.45
CHEK1-218ENST00000544373 AGXT2Q9BYV1 514 aa12.27□□□□□ -0.45
CHEK1-218ENST00000544373 SETD4Q9NVD3 440 aa12.27□□□□□ -0.45
CHEK1-218ENST00000544373 MSRAQ9UJ68 235 aa12.27□□□□□ -0.45
CHEK1-218ENST00000544373 TTC28Q96AY4 2481 aa12.27□□□□□ -0.45
CHEK1-218ENST00000544373 GSTTP1A0A1W2PQM5 241 aa12.26□□□□□ -0.45
CHEK1-218ENST00000544373 C17orf102A2RUQ5 167 aa12.26□□□□□ -0.45
CHEK1-218ENST00000544373 FOSL2P15408 326 aa12.26□□□□□ -0.45
CHEK1-218ENST00000544373 HOXC8P31273 242 aa12.26□□□□□ -0.45
CHEK1-218ENST00000544373 ADCY7P51828 1080 aa12.26□□□□□ -0.45
CHEK1-218ENST00000544373 MTMR1Q13613 665 aa12.26□□□□□ -0.45
CHEK1-218ENST00000544373 PPP1R18Q6NYC8 613 aa12.26□□□□□ -0.45
CHEK1-218ENST00000544373 TMCO2Q7Z6W1 182 aaPredicted RBP12.26□□□□□ -0.45
CHEK1-218ENST00000544373 SERINC5Q86VE9 423 aa12.26□□□□□ -0.45
CHEK1-218ENST00000544373 CCDC155Q8N6L0 562 aa12.26□□□□□ -0.45
CHEK1-218ENST00000544373 MAFAQ8NHW3 353 aaPredicted RBP12.26□□□□□ -0.45
CHEK1-218ENST00000544373 LARP6Q9BRS8 491 aaKnown RBP12.26□□□□□ -0.45
CHEK1-218ENST00000544373 PRDM12Q9H4Q4 367 aa12.26□□□□□ -0.45
CHEK1-218ENST00000544373 NCOA5Q9HCD5 579 aaKnown RBP12.26□□□□□ -0.45
CHEK1-218ENST00000544373 JADE2Q9NQC1 790 aa12.26□□□□□ -0.45
CHEK1-218ENST00000544373 PPP4R2Q9NY27 417 aa12.26□□□□□ -0.45
CHEK1-218ENST00000544373 TET1Q8NFU7 2136 aa12.26□□□□□ -0.45
CHEK1-218ENST00000544373 CXCL10P02778 98 aa12.26□□□□□ -0.45
CHEK1-218ENST00000544373 ARP10275 920 aa12.26□□□□□ -0.45
CHEK1-218ENST00000544373 PSMA5P28066 241 aa12.26□□□□□ -0.45
CHEK1-218ENST00000544373 TCF7P36402 384 aaPredicted RBP12.26□□□□□ -0.45
CHEK1-218ENST00000544373 CLK2P49760 499 aaKnown RBP12.26□□□□□ -0.45
CHEK1-218ENST00000544373 CCT2P78371 535 aaKnown RBP12.26□□□□□ -0.45
CHEK1-218ENST00000544373 TOB2Q14106 344 aaPredicted RBP12.26□□□□□ -0.45
CHEK1-218ENST00000544373 RAB30Q15771 203 aa12.26□□□□□ -0.45
CHEK1-218ENST00000544373 NTRK3Q16288 839 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms