RNA–Protein interactions for RNA: ENST00000543794.5

LPCAT3-211, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 2

Gene LPCAT3, Length 1,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-211ENST00000543794 POLR2MP0CAP2 368 aa23.16■■□□□ 1.3
LPCAT3-211ENST00000543794 SMIM10L2AP0DMW4 78 aa23.16■■□□□ 1.3
LPCAT3-211ENST00000543794 SMIM10L2BP0DMW5 78 aa23.16■■□□□ 1.3
LPCAT3-211ENST00000543794 CCND2P30279 289 aa23.16■■□□□ 1.3
LPCAT3-211ENST00000543794 PUS10Q3MIT2 529 aaKnown RBP23.16■■□□□ 1.3
LPCAT3-211ENST00000543794 B4GALNT3Q6L9W6 998 aa23.16■■□□□ 1.3
LPCAT3-211ENST00000543794 CHD1LQ86WJ1 897 aa23.16■■□□□ 1.3
LPCAT3-211ENST00000543794 SEPT8Q92599 483 aa23.16■■□□□ 1.3
LPCAT3-211ENST00000543794 ZFP91Q96JP5 570 aaPredicted RBP23.16■■□□□ 1.3
LPCAT3-211ENST00000543794 PRR33A8MZF0 331 aa23.15■■□□□ 1.3
LPCAT3-211ENST00000543794 H3BNC9 293 aa23.15■■□□□ 1.3
LPCAT3-211ENST00000543794 CAND2O75155 1236 aa23.15■■□□□ 1.3
LPCAT3-211ENST00000543794 LGALS2P05162 132 aa23.15■■□□□ 1.3
LPCAT3-211ENST00000543794 TRAF1Q13077 416 aa23.15■■□□□ 1.3
LPCAT3-211ENST00000543794 OSBPL7Q9BZF2 842 aa23.15■■□□□ 1.3
LPCAT3-211ENST00000543794 BCAS3Q9H6U6 928 aa23.15■■□□□ 1.3
LPCAT3-211ENST00000543794 SIP14410 1827 aa23.15■■□□□ 1.3
LPCAT3-211ENST00000543794 MYH7BA7E2Y1 1941 aa23.14■■□□□ 1.3
LPCAT3-211ENST00000543794 SLC35G1Q2M3R5 365 aa23.14■■□□□ 1.29
LPCAT3-211ENST00000543794 TIGD5Q53EQ6 642 aa23.14■■□□□ 1.29
LPCAT3-211ENST00000543794 BANK1Q8NDB2 785 aa23.14■■□□□ 1.29
LPCAT3-211ENST00000543794 YME1L1Q96TA2 773 aa23.14■■□□□ 1.29
LPCAT3-211ENST00000543794 USP26Q9BXU7 913 aa23.14■■□□□ 1.29
LPCAT3-211ENST00000543794 RIOX1Q9H6W3 641 aa23.14■■□□□ 1.29
LPCAT3-211ENST00000543794 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.13■■□□□ 1.29
LPCAT3-211ENST00000543794 ALADP13716 330 aa23.13■■□□□ 1.29
LPCAT3-211ENST00000543794 SSTR3P32745 418 aaPredicted RBP23.13■■□□□ 1.29
LPCAT3-211ENST00000543794 ICAM3P32942 547 aa23.13■■□□□ 1.29
LPCAT3-211ENST00000543794 NUCB1Q02818 461 aa23.13■■□□□ 1.29
LPCAT3-211ENST00000543794 GPM6BQ13491 265 aa23.13■■□□□ 1.29
LPCAT3-211ENST00000543794 AAMPQ13685 434 aa23.13■■□□□ 1.29
LPCAT3-211ENST00000543794 CYB5R4Q7L1T6 521 aa23.13■■□□□ 1.29
LPCAT3-211ENST00000543794 FCHSD1Q86WN1 690 aa23.13■■□□□ 1.29
LPCAT3-211ENST00000543794 TMEM192Q8IY95 271 aa23.13■■□□□ 1.29
LPCAT3-211ENST00000543794 PIGSQ96S52 555 aa23.13■■□□□ 1.29
LPCAT3-211ENST00000543794 RWDD1Q9H446 243 aaPredicted RBP23.13■■□□□ 1.29
LPCAT3-211ENST00000543794 UPP2O95045 317 aa23.12■■□□□ 1.29
LPCAT3-211ENST00000543794 GNAT1P11488 350 aa23.12■■□□□ 1.29
LPCAT3-211ENST00000543794 MRPS9P82933 396 aaKnown RBP23.12■■□□□ 1.29
LPCAT3-211ENST00000543794 COL19A1Q14993 1142 aa23.12■■□□□ 1.29
LPCAT3-211ENST00000543794 HOMER1Q86YM7 354 aa23.12■■□□□ 1.29
LPCAT3-211ENST00000543794 PABPC5Q96DU9 382 aaKnown RBP23.12■■□□□ 1.29
LPCAT3-211ENST00000543794 MYH6P13533 1939 aa23.12■■□□□ 1.29
LPCAT3-211ENST00000543794 LAMA4Q16363 1823 aa23.11■■□□□ 1.29
LPCAT3-211ENST00000543794 SPATA31C2B4DYI2 1134 aa23.11■■□□□ 1.29
LPCAT3-211ENST00000543794 H3BQ06 376 aaPredicted RBP23.11■■□□□ 1.29
LPCAT3-211ENST00000543794 NOP56O00567 594 aaKnown RBP23.11■■□□□ 1.29
LPCAT3-211ENST00000543794 STAM2O75886 525 aa23.11■■□□□ 1.29
LPCAT3-211ENST00000543794 CTSHP09668 335 aa23.11■■□□□ 1.29
LPCAT3-211ENST00000543794 NEDD9Q14511 834 aa23.11■■□□□ 1.29
LPCAT3-211ENST00000543794 GNPTABQ3T906 1256 aa23.11■■□□□ 1.29
LPCAT3-211ENST00000543794 METTL7BQ6UX53 244 aa23.11■■□□□ 1.29
LPCAT3-211ENST00000543794 APBB2Q92870 758 aa23.11■■□□□ 1.29
LPCAT3-211ENST00000543794 INPP4AQ96PE3 977 aaPredicted RBP23.11■■□□□ 1.29
LPCAT3-211ENST00000543794 SETD4Q9NVD3 440 aa23.11■■□□□ 1.29
LPCAT3-211ENST00000543794 MICAL3Q7RTP6 2002 aa23.11■■□□□ 1.29
LPCAT3-211ENST00000543794 PNMA6FA0A0J9YX94 578 aa23.1■■□□□ 1.29
LPCAT3-211ENST00000543794 CYTH3O43739 400 aa23.1■■□□□ 1.29
LPCAT3-211ENST00000543794 ADAM17P78536 824 aa23.1■■□□□ 1.29
LPCAT3-211ENST00000543794 GRM4Q14833 912 aa23.1■■□□□ 1.29
LPCAT3-211ENST00000543794 TCEAL5Q5H9L2 206 aa23.1■■□□□ 1.29
LPCAT3-211ENST00000543794 FAM26DQ5JW98 314 aa23.1■■□□□ 1.29
LPCAT3-211ENST00000543794 CYFIP1Q7L576 1253 aa23.1■■□□□ 1.29
LPCAT3-211ENST00000543794 GPR20Q99678 358 aa23.1■■□□□ 1.29
LPCAT3-211ENST00000543794 MUC6Q6W4X9 2439 aa23.1■■□□□ 1.29
LPCAT3-211ENST00000543794 FRMPD4Q14CM0 1322 aa23.09■■□□□ 1.29
LPCAT3-211ENST00000543794 PIEZO1Q92508 2521 aa23.09■■□□□ 1.29
LPCAT3-211ENST00000543794 POTEB3A0JP26 581 aa23.09■■□□□ 1.29
LPCAT3-211ENST00000543794 SEMA3FQ13275 785 aa23.09■■□□□ 1.29
LPCAT3-211ENST00000543794 POTEBQ6S5H4 581 aa23.09■■□□□ 1.29
LPCAT3-211ENST00000543794 IFIH1Q9BYX4 1025 aaKnown RBP23.09■■□□□ 1.29
LPCAT3-211ENST00000543794 IL25Q9H293 177 aa23.09■■□□□ 1.29
LPCAT3-211ENST00000543794 NSUN3Q9H649 340 aaKnown RBP23.09■■□□□ 1.29
LPCAT3-211ENST00000543794 IGHDP01880 384 aa23.08■■□□□ 1.29
LPCAT3-211ENST00000543794 RTEL1Q9NZ71 1219 aa23.08■■□□□ 1.29
LPCAT3-211ENST00000543794 FAM50BQ9Y247 325 aa23.08■■□□□ 1.29
LPCAT3-211ENST00000543794 FIBPO43427 364 aa23.07■■□□□ 1.28
LPCAT3-211ENST00000543794 TROAPQ12815 778 aa23.07■■□□□ 1.28
LPCAT3-211ENST00000543794 TRDNQ13061 729 aa23.07■■□□□ 1.28
LPCAT3-211ENST00000543794 IL17RAQ96F46 866 aa23.07■■□□□ 1.28
LPCAT3-211ENST00000543794 SENP7Q9BQF6 1050 aa23.07■■□□□ 1.28
LPCAT3-211ENST00000543794 PRKAG3Q9UGI9 489 aa23.07■■□□□ 1.28
LPCAT3-211ENST00000543794 ZNF215Q9UL58 517 aaPredicted RBP23.07■■□□□ 1.28
LPCAT3-211ENST00000543794 COL4A6Q14031 1691 aa23.06■■□□□ 1.28
LPCAT3-211ENST00000543794 C5orf67F2Z3F1 127 aa23.06■■□□□ 1.28
LPCAT3-211ENST00000543794 DCXO43602 365 aa23.06■■□□□ 1.28
LPCAT3-211ENST00000543794 NCK2O43639 380 aa23.06■■□□□ 1.28
LPCAT3-211ENST00000543794 RB1P06400 928 aa23.06■■□□□ 1.28
LPCAT3-211ENST00000543794 ZP2Q05996 745 aa23.06■■□□□ 1.28
LPCAT3-211ENST00000543794 RPAINQ86UA6 219 aa23.06■■□□□ 1.28
LPCAT3-211ENST00000543794 TRIM50Q86XT4 487 aa23.06■■□□□ 1.28
LPCAT3-211ENST00000543794 FIBCD1Q8N539 461 aa23.06■■□□□ 1.28
LPCAT3-211ENST00000543794 LMBR1Q8WVP7 490 aa23.06■■□□□ 1.28
LPCAT3-211ENST00000543794 SENP2Q9HC62 589 aa23.06■■□□□ 1.28
LPCAT3-211ENST00000543794 TELO2Q9Y4R8 837 aa23.06■■□□□ 1.28
LPCAT3-211ENST00000543794 NRCAMQ92823 1304 aa23.06■■□□□ 1.28
LPCAT3-211ENST00000543794 C19orf67A6NJJ6 358 aa23.05■■□□□ 1.28
LPCAT3-211ENST00000543794 IFIT3O14879 490 aaKnown RBP23.05■■□□□ 1.28
LPCAT3-211ENST00000543794 CHRNA1P02708 482 aa23.05■■□□□ 1.28
LPCAT3-211ENST00000543794 LTBRP36941 435 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms