RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 MAMDC4Q6UXC1 1216 aa31.29■■■□□ 2.6
CCM2-218ENST00000541586 CDKN2AIPQ9NXV6 580 aaPredicted RBP31.29■■■□□ 2.6
CCM2-218ENST00000541586 PP2D1A8MPX8 630 aa31.29■■■□□ 2.6
CCM2-218ENST00000541586 ACTN4O43707 911 aaKnown RBP31.29■■■□□ 2.6
CCM2-218ENST00000541586 CCND2P30279 289 aa31.29■■■□□ 2.6
CCM2-218ENST00000541586 CIITAP33076 1130 aa31.29■■■□□ 2.6
CCM2-218ENST00000541586 L1TD1Q5T7N2 865 aaKnown RBP31.29■■■□□ 2.6
CCM2-218ENST00000541586 TRMT44Q8IYL2 757 aaKnown RBP31.29■■■□□ 2.6
CCM2-218ENST00000541586 RPTORQ8N122 1335 aa31.29■■■□□ 2.6
CCM2-218ENST00000541586 PXYLP1Q8TE99 480 aa31.29■■■□□ 2.6
CCM2-218ENST00000541586 HAS1Q92839 578 aa31.29■■■□□ 2.6
CCM2-218ENST00000541586 DHX58Q96C10 678 aa31.29■■■□□ 2.6
CCM2-218ENST00000541586 AK8Q96MA6 479 aa31.29■■■□□ 2.6
CCM2-218ENST00000541586 SNAI1O95863 264 aaPredicted RBP31.28■■■□□ 2.6
CCM2-218ENST00000541586 TXLNAP40222 546 aa31.28■■■□□ 2.6
CCM2-218ENST00000541586 VSIG10LQ86VR7 867 aa31.28■■■□□ 2.6
CCM2-218ENST00000541586 ELOA2Q8IYF1 753 aaPredicted RBP31.28■■■□□ 2.6
CCM2-218ENST00000541586 SH3TC2Q8TF17 1288 aa31.28■■■□□ 2.6
CCM2-218ENST00000541586 KIAA1468Q9P260 1216 aa31.28■■■□□ 2.6
CCM2-218ENST00000541586 FAM86B1E9PN63 330 aa31.27■■■□□ 2.6
CCM2-218ENST00000541586 FAM86B2P0C5J1 330 aa31.27■■■□□ 2.6
CCM2-218ENST00000541586 ZNF76P36508 570 aa31.27■■■□□ 2.6
CCM2-218ENST00000541586 FXR2P51116 673 aaKnown RBP eCLIP31.27■■■□□ 2.6
CCM2-218ENST00000541586 Q4G0T1 1027 aa31.27■■■□□ 2.6
CCM2-218ENST00000541586 MSL3Q8N5Y2 521 aaKnown RBP31.27■■■□□ 2.6
CCM2-218ENST00000541586 IGSF22Q8N9C0 903 aa31.27■■■□□ 2.6
CCM2-218ENST00000541586 SLAIN1Q8ND83 568 aa31.27■■■□□ 2.6
CCM2-218ENST00000541586 SYNGAP1Q96PV0 1343 aa31.27■■■□□ 2.6
CCM2-218ENST00000541586 EDNRBP24530 442 aa31.27■■■□□ 2.6
CCM2-218ENST00000541586 FBXO16Q8IX29 292 aaPredicted RBP31.27■■■□□ 2.6
CCM2-218ENST00000541586 KCNMB3Q9NPA1 279 aa31.27■■■□□ 2.6
CCM2-218ENST00000541586 FRMPD4Q14CM0 1322 aa31.26■■■□□ 2.59
CCM2-218ENST00000541586 UBA7P41226 1012 aa31.26■■■□□ 2.59
CCM2-218ENST00000541586 MRPS9P82933 396 aaKnown RBP31.26■■■□□ 2.59
CCM2-218ENST00000541586 PKN2Q16513 984 aaKnown RBP31.26■■■□□ 2.59
CCM2-218ENST00000541586 TMEM266Q2M3C6 531 aa31.26■■■□□ 2.59
CCM2-218ENST00000541586 SLC9C1Q4G0N8 1177 aa31.26■■■□□ 2.59
CCM2-218ENST00000541586 PRR16Q569H4 304 aa31.26■■■□□ 2.59
CCM2-218ENST00000541586 PCNX4Q63HM2 1172 aa31.26■■■□□ 2.59
CCM2-218ENST00000541586 LENG9Q96B70 501 aa31.26■■■□□ 2.59
CCM2-218ENST00000541586 CCSER1Q9C0I3 900 aa31.26■■■□□ 2.59
CCM2-218ENST00000541586 HMGCRP04035 888 aa31.25■■■□□ 2.59
CCM2-218ENST00000541586 SLFN14P0C7P3 912 aa31.25■■■□□ 2.59
CCM2-218ENST00000541586 MDM2Q00987 491 aaPredicted RBP31.25■■■□□ 2.59
CCM2-218ENST00000541586 E2F4Q16254 413 aa31.25■■■□□ 2.59
CCM2-218ENST00000541586 FBXO46Q6PJ61 603 aaPredicted RBP31.25■■■□□ 2.59
CCM2-218ENST00000541586 SEPT14Q6ZU15 432 aa31.25■■■□□ 2.59
CCM2-218ENST00000541586 PYM1Q9BRP8 204 aaKnown RBP31.25■■■□□ 2.59
CCM2-218ENST00000541586 TTC12Q9H892 705 aaPredicted RBP31.25■■■□□ 2.59
CCM2-218ENST00000541586 ZHX1Q9UKY1 873 aaPredicted RBP31.25■■■□□ 2.59
CCM2-218ENST00000541586 MCM3APO60318 1980 aa31.24■■■□□ 2.59
CCM2-218ENST00000541586 LOC102724159A0A0B4J2E5 919 aa31.24■■■□□ 2.59
CCM2-218ENST00000541586 MARCH6O60337 910 aa31.24■■■□□ 2.59
CCM2-218ENST00000541586 EIF3JO75822 258 aaKnown RBP31.24■■■□□ 2.59
CCM2-218ENST00000541586 PNOCQ13519 176 aa31.24■■■□□ 2.59
CCM2-218ENST00000541586 KARSQ15046 597 aaKnown RBP31.24■■■□□ 2.59
CCM2-218ENST00000541586 PWP2Q15269 919 aaKnown RBP31.24■■■□□ 2.59
CCM2-218ENST00000541586 KANK3Q6NY19 840 aa31.24■■■□□ 2.59
CCM2-218ENST00000541586 MORC4Q8TE76 937 aa31.24■■■□□ 2.59
CCM2-218ENST00000541586 GJA10Q969M2 543 aa31.24■■■□□ 2.59
CCM2-218ENST00000541586 USP25Q9UHP3 1055 aa31.24■■■□□ 2.59
CCM2-218ENST00000541586 MYCP01106 439 aaPredicted RBP31.24■■■□□ 2.59
CCM2-218ENST00000541586 CACNB2Q08289 660 aaPredicted RBP31.24■■■□□ 2.59
CCM2-218ENST00000541586 ACVR2BQ13705 512 aa31.24■■■□□ 2.59
CCM2-218ENST00000541586 IQUBQ8NA54 791 aa31.24■■■□□ 2.59
CCM2-218ENST00000541586 RNF214Q8ND24 703 aa31.24■■■□□ 2.59
CCM2-218ENST00000541586 ABHD16BQ9H3Z7 469 aa31.24■■■□□ 2.59
CCM2-218ENST00000541586 HOOK1Q9UJC3 728 aaKnown RBP31.24■■■□□ 2.59
CCM2-218ENST00000541586 XRCC6P12956 609 aaKnown RBP eCLIP31.23■■■□□ 2.59
CCM2-218ENST00000541586 PDIA5Q14554 519 aa31.23■■■□□ 2.59
CCM2-218ENST00000541586 CEP57L1Q8IYX8 460 aa31.23■■■□□ 2.59
CCM2-218ENST00000541586 CYP2W1Q8TAV3 490 aa31.23■■■□□ 2.59
CCM2-218ENST00000541586 ETNPPLQ8TBG4 499 aa31.23■■■□□ 2.59
CCM2-218ENST00000541586 RAB34Q9BZG1 259 aa31.23■■■□□ 2.59
CCM2-218ENST00000541586 INHAP05111 366 aa31.22■■■□□ 2.59
CCM2-218ENST00000541586 PRKAR2AP13861 404 aaKnown RBP31.22■■■□□ 2.59
CCM2-218ENST00000541586 CNGA1P29973 690 aa31.22■■■□□ 2.59
CCM2-218ENST00000541586 CABP7Q86V35 215 aa31.22■■■□□ 2.59
CCM2-218ENST00000541586 PDGFCQ9NRA1 345 aa31.22■■■□□ 2.59
CCM2-218ENST00000541586 DISC1Q9NRI5 854 aa31.22■■■□□ 2.59
CCM2-218ENST00000541586 LRWD1Q9UFC0 647 aa31.22■■■□□ 2.59
CCM2-218ENST00000541586 PCDHA12Q9UN75 941 aa31.22■■■□□ 2.59
CCM2-218ENST00000541586 IGLV3-22A0A075B6J6 115 aa31.21■■■□□ 2.59
CCM2-218ENST00000541586 TBX3O15119 743 aa31.21■■■□□ 2.59
CCM2-218ENST00000541586 IGHA2P01877 340 aa31.21■■■□□ 2.59
CCM2-218ENST00000541586 POSTNQ15063 836 aa31.21■■■□□ 2.59
CCM2-218ENST00000541586 XRRA1Q6P2D8 792 aa31.21■■■□□ 2.59
CCM2-218ENST00000541586 SLFN12Q8IYM2 578 aa31.21■■■□□ 2.59
CCM2-218ENST00000541586 GRAMD1CQ8IYS0 662 aa31.21■■■□□ 2.59
CCM2-218ENST00000541586 UIMC1Q96RL1 719 aa31.21■■■□□ 2.59
CCM2-218ENST00000541586 MMTAG2Q9BU76 263 aaKnown RBP31.21■■■□□ 2.59
CCM2-218ENST00000541586 WDR11Q9BZH6 1224 aa31.21■■■□□ 2.59
CCM2-218ENST00000541586 TUBE1Q9UJT0 475 aa31.21■■■□□ 2.59
CCM2-218ENST00000541586 POTEMA6NI47 508 aa31.2■■■□□ 2.58
CCM2-218ENST00000541586 STX1AQ16623 288 aa31.2■■■□□ 2.58
CCM2-218ENST00000541586 ANO6Q4KMQ2 910 aa31.2■■■□□ 2.58
CCM2-218ENST00000541586 PDXDC2PQ6P474 469 aa31.2■■■□□ 2.58
CCM2-218ENST00000541586 RASSF8Q8NHQ8 419 aa31.2■■■□□ 2.58
CCM2-218ENST00000541586 CCDC34Q96HJ3 373 aa31.2■■■□□ 2.58
CCM2-218ENST00000541586 CCDC39Q9UFE4 941 aa31.2■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms