RNA–Protein interactions for RNA: ENST00000538910.1

LPCAT3-207, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 5

Gene LPCAT3, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-207ENST00000538910 POLR2MP0CAP2 368 aa23.16■■□□□ 1.3
LPCAT3-207ENST00000538910 SMIM10L2AP0DMW4 78 aa23.16■■□□□ 1.3
LPCAT3-207ENST00000538910 SMIM10L2BP0DMW5 78 aa23.16■■□□□ 1.3
LPCAT3-207ENST00000538910 CCND2P30279 289 aa23.16■■□□□ 1.3
LPCAT3-207ENST00000538910 PUS10Q3MIT2 529 aaKnown RBP23.16■■□□□ 1.3
LPCAT3-207ENST00000538910 B4GALNT3Q6L9W6 998 aa23.16■■□□□ 1.3
LPCAT3-207ENST00000538910 CHD1LQ86WJ1 897 aa23.16■■□□□ 1.3
LPCAT3-207ENST00000538910 SEPT8Q92599 483 aa23.16■■□□□ 1.3
LPCAT3-207ENST00000538910 ZFP91Q96JP5 570 aaPredicted RBP23.16■■□□□ 1.3
LPCAT3-207ENST00000538910 PRR33A8MZF0 331 aa23.15■■□□□ 1.3
LPCAT3-207ENST00000538910 H3BNC9 293 aa23.15■■□□□ 1.3
LPCAT3-207ENST00000538910 CAND2O75155 1236 aa23.15■■□□□ 1.3
LPCAT3-207ENST00000538910 LGALS2P05162 132 aa23.15■■□□□ 1.3
LPCAT3-207ENST00000538910 TRAF1Q13077 416 aa23.15■■□□□ 1.3
LPCAT3-207ENST00000538910 OSBPL7Q9BZF2 842 aa23.15■■□□□ 1.3
LPCAT3-207ENST00000538910 BCAS3Q9H6U6 928 aa23.15■■□□□ 1.3
LPCAT3-207ENST00000538910 SIP14410 1827 aa23.15■■□□□ 1.3
LPCAT3-207ENST00000538910 MYH7BA7E2Y1 1941 aa23.14■■□□□ 1.3
LPCAT3-207ENST00000538910 SLC35G1Q2M3R5 365 aa23.14■■□□□ 1.29
LPCAT3-207ENST00000538910 TIGD5Q53EQ6 642 aa23.14■■□□□ 1.29
LPCAT3-207ENST00000538910 BANK1Q8NDB2 785 aa23.14■■□□□ 1.29
LPCAT3-207ENST00000538910 YME1L1Q96TA2 773 aa23.14■■□□□ 1.29
LPCAT3-207ENST00000538910 USP26Q9BXU7 913 aa23.14■■□□□ 1.29
LPCAT3-207ENST00000538910 RIOX1Q9H6W3 641 aa23.14■■□□□ 1.29
LPCAT3-207ENST00000538910 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.13■■□□□ 1.29
LPCAT3-207ENST00000538910 ALADP13716 330 aa23.13■■□□□ 1.29
LPCAT3-207ENST00000538910 SSTR3P32745 418 aaPredicted RBP23.13■■□□□ 1.29
LPCAT3-207ENST00000538910 ICAM3P32942 547 aa23.13■■□□□ 1.29
LPCAT3-207ENST00000538910 NUCB1Q02818 461 aa23.13■■□□□ 1.29
LPCAT3-207ENST00000538910 GPM6BQ13491 265 aa23.13■■□□□ 1.29
LPCAT3-207ENST00000538910 AAMPQ13685 434 aa23.13■■□□□ 1.29
LPCAT3-207ENST00000538910 CYB5R4Q7L1T6 521 aa23.13■■□□□ 1.29
LPCAT3-207ENST00000538910 FCHSD1Q86WN1 690 aa23.13■■□□□ 1.29
LPCAT3-207ENST00000538910 TMEM192Q8IY95 271 aa23.13■■□□□ 1.29
LPCAT3-207ENST00000538910 PIGSQ96S52 555 aa23.13■■□□□ 1.29
LPCAT3-207ENST00000538910 RWDD1Q9H446 243 aaPredicted RBP23.13■■□□□ 1.29
LPCAT3-207ENST00000538910 UPP2O95045 317 aa23.12■■□□□ 1.29
LPCAT3-207ENST00000538910 GNAT1P11488 350 aa23.12■■□□□ 1.29
LPCAT3-207ENST00000538910 MRPS9P82933 396 aaKnown RBP23.12■■□□□ 1.29
LPCAT3-207ENST00000538910 COL19A1Q14993 1142 aa23.12■■□□□ 1.29
LPCAT3-207ENST00000538910 HOMER1Q86YM7 354 aa23.12■■□□□ 1.29
LPCAT3-207ENST00000538910 PABPC5Q96DU9 382 aaKnown RBP23.12■■□□□ 1.29
LPCAT3-207ENST00000538910 MYH6P13533 1939 aa23.12■■□□□ 1.29
LPCAT3-207ENST00000538910 LAMA4Q16363 1823 aa23.11■■□□□ 1.29
LPCAT3-207ENST00000538910 SPATA31C2B4DYI2 1134 aa23.11■■□□□ 1.29
LPCAT3-207ENST00000538910 H3BQ06 376 aaPredicted RBP23.11■■□□□ 1.29
LPCAT3-207ENST00000538910 NOP56O00567 594 aaKnown RBP23.11■■□□□ 1.29
LPCAT3-207ENST00000538910 STAM2O75886 525 aa23.11■■□□□ 1.29
LPCAT3-207ENST00000538910 CTSHP09668 335 aa23.11■■□□□ 1.29
LPCAT3-207ENST00000538910 NEDD9Q14511 834 aa23.11■■□□□ 1.29
LPCAT3-207ENST00000538910 GNPTABQ3T906 1256 aa23.11■■□□□ 1.29
LPCAT3-207ENST00000538910 METTL7BQ6UX53 244 aa23.11■■□□□ 1.29
LPCAT3-207ENST00000538910 APBB2Q92870 758 aa23.11■■□□□ 1.29
LPCAT3-207ENST00000538910 INPP4AQ96PE3 977 aaPredicted RBP23.11■■□□□ 1.29
LPCAT3-207ENST00000538910 SETD4Q9NVD3 440 aa23.11■■□□□ 1.29
LPCAT3-207ENST00000538910 MICAL3Q7RTP6 2002 aa23.11■■□□□ 1.29
LPCAT3-207ENST00000538910 PNMA6FA0A0J9YX94 578 aa23.1■■□□□ 1.29
LPCAT3-207ENST00000538910 CYTH3O43739 400 aa23.1■■□□□ 1.29
LPCAT3-207ENST00000538910 ADAM17P78536 824 aa23.1■■□□□ 1.29
LPCAT3-207ENST00000538910 GRM4Q14833 912 aa23.1■■□□□ 1.29
LPCAT3-207ENST00000538910 TCEAL5Q5H9L2 206 aa23.1■■□□□ 1.29
LPCAT3-207ENST00000538910 FAM26DQ5JW98 314 aa23.1■■□□□ 1.29
LPCAT3-207ENST00000538910 CYFIP1Q7L576 1253 aa23.1■■□□□ 1.29
LPCAT3-207ENST00000538910 GPR20Q99678 358 aa23.1■■□□□ 1.29
LPCAT3-207ENST00000538910 MUC6Q6W4X9 2439 aa23.1■■□□□ 1.29
LPCAT3-207ENST00000538910 FRMPD4Q14CM0 1322 aa23.09■■□□□ 1.29
LPCAT3-207ENST00000538910 PIEZO1Q92508 2521 aa23.09■■□□□ 1.29
LPCAT3-207ENST00000538910 POTEB3A0JP26 581 aa23.09■■□□□ 1.29
LPCAT3-207ENST00000538910 SEMA3FQ13275 785 aa23.09■■□□□ 1.29
LPCAT3-207ENST00000538910 POTEBQ6S5H4 581 aa23.09■■□□□ 1.29
LPCAT3-207ENST00000538910 IFIH1Q9BYX4 1025 aaKnown RBP23.09■■□□□ 1.29
LPCAT3-207ENST00000538910 IL25Q9H293 177 aa23.09■■□□□ 1.29
LPCAT3-207ENST00000538910 NSUN3Q9H649 340 aaKnown RBP23.09■■□□□ 1.29
LPCAT3-207ENST00000538910 IGHDP01880 384 aa23.08■■□□□ 1.29
LPCAT3-207ENST00000538910 RTEL1Q9NZ71 1219 aa23.08■■□□□ 1.29
LPCAT3-207ENST00000538910 FAM50BQ9Y247 325 aa23.08■■□□□ 1.29
LPCAT3-207ENST00000538910 FIBPO43427 364 aa23.07■■□□□ 1.28
LPCAT3-207ENST00000538910 TROAPQ12815 778 aa23.07■■□□□ 1.28
LPCAT3-207ENST00000538910 TRDNQ13061 729 aa23.07■■□□□ 1.28
LPCAT3-207ENST00000538910 IL17RAQ96F46 866 aa23.07■■□□□ 1.28
LPCAT3-207ENST00000538910 SENP7Q9BQF6 1050 aa23.07■■□□□ 1.28
LPCAT3-207ENST00000538910 PRKAG3Q9UGI9 489 aa23.07■■□□□ 1.28
LPCAT3-207ENST00000538910 ZNF215Q9UL58 517 aaPredicted RBP23.07■■□□□ 1.28
LPCAT3-207ENST00000538910 COL4A6Q14031 1691 aa23.06■■□□□ 1.28
LPCAT3-207ENST00000538910 C5orf67F2Z3F1 127 aa23.06■■□□□ 1.28
LPCAT3-207ENST00000538910 DCXO43602 365 aa23.06■■□□□ 1.28
LPCAT3-207ENST00000538910 NCK2O43639 380 aa23.06■■□□□ 1.28
LPCAT3-207ENST00000538910 RB1P06400 928 aa23.06■■□□□ 1.28
LPCAT3-207ENST00000538910 ZP2Q05996 745 aa23.06■■□□□ 1.28
LPCAT3-207ENST00000538910 RPAINQ86UA6 219 aa23.06■■□□□ 1.28
LPCAT3-207ENST00000538910 TRIM50Q86XT4 487 aa23.06■■□□□ 1.28
LPCAT3-207ENST00000538910 FIBCD1Q8N539 461 aa23.06■■□□□ 1.28
LPCAT3-207ENST00000538910 LMBR1Q8WVP7 490 aa23.06■■□□□ 1.28
LPCAT3-207ENST00000538910 SENP2Q9HC62 589 aa23.06■■□□□ 1.28
LPCAT3-207ENST00000538910 TELO2Q9Y4R8 837 aa23.06■■□□□ 1.28
LPCAT3-207ENST00000538910 NRCAMQ92823 1304 aa23.06■■□□□ 1.28
LPCAT3-207ENST00000538910 C19orf67A6NJJ6 358 aa23.05■■□□□ 1.28
LPCAT3-207ENST00000538910 IFIT3O14879 490 aaKnown RBP23.05■■□□□ 1.28
LPCAT3-207ENST00000538910 CHRNA1P02708 482 aa23.05■■□□□ 1.28
LPCAT3-207ENST00000538910 LTBRP36941 435 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms