RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 P3H1Q32P28 736 aa9.29□□□□□ -0.92
SRGAP1-202ENST00000537556 TCERG1LQ5VWI1 586 aa9.29□□□□□ -0.92
SRGAP1-202ENST00000537556 UCMAQ8WVF2 138 aa9.29□□□□□ -0.92
SRGAP1-202ENST00000537556 KCNN1Q92952 543 aa9.29□□□□□ -0.92
SRGAP1-202ENST00000537556 NAP1L3Q99457 506 aaPredicted RBP9.29□□□□□ -0.92
SRGAP1-202ENST00000537556 ETNK1Q9HBU6 452 aa9.29□□□□□ -0.92
SRGAP1-202ENST00000537556 LRWD1Q9UFC0 647 aa9.29□□□□□ -0.92
SRGAP1-202ENST00000537556 MROH7Q68CQ1 1323 aa9.29□□□□□ -0.92
SRGAP1-202ENST00000537556 TMEM247A6NEH6 219 aa9.29□□□□□ -0.92
SRGAP1-202ENST00000537556 GNA14O95837 355 aa9.29□□□□□ -0.92
SRGAP1-202ENST00000537556 ITGA2BP08514 1039 aa9.29□□□□□ -0.92
SRGAP1-202ENST00000537556 CD44P16070 742 aaKnown RBP9.29□□□□□ -0.92
SRGAP1-202ENST00000537556 HOXD12P35452 270 aa9.29□□□□□ -0.92
SRGAP1-202ENST00000537556 CD97P48960 835 aa9.29□□□□□ -0.92
SRGAP1-202ENST00000537556 CDK17Q00537 523 aa9.29□□□□□ -0.92
SRGAP1-202ENST00000537556 TRIM29Q14134 588 aa9.29□□□□□ -0.92
SRGAP1-202ENST00000537556 MB21D1Q8N884 522 aa9.29□□□□□ -0.92
SRGAP1-202ENST00000537556 CTNNBL1Q8WYA6 563 aaPredicted RBP9.29□□□□□ -0.92
SRGAP1-202ENST00000537556 NR1H4Q96RI1 486 aaPredicted RBP9.29□□□□□ -0.92
SRGAP1-202ENST00000537556 TRAIPQ9BWF2 469 aa9.29□□□□□ -0.92
SRGAP1-202ENST00000537556 IFIH1Q9BYX4 1025 aaKnown RBP9.29□□□□□ -0.92
SRGAP1-202ENST00000537556 CCDC8Q9H0W5 538 aaPredicted RBP9.29□□□□□ -0.92
SRGAP1-202ENST00000537556 GPCPD1Q9NPB8 672 aa9.29□□□□□ -0.92
SRGAP1-202ENST00000537556 SMARCAL1Q9NZC9 954 aa9.29□□□□□ -0.92
SRGAP1-202ENST00000537556 IL1RAPL1Q9NZN1 696 aa9.29□□□□□ -0.92
SRGAP1-202ENST00000537556 SYNPO2Q9UMS6 1093 aa9.29□□□□□ -0.92
SRGAP1-202ENST00000537556 R3HDM2Q9Y2K5 976 aaKnown RBP9.29□□□□□ -0.92
SRGAP1-202ENST00000537556 ARL2BPQ9Y2Y0 163 aa9.29□□□□□ -0.92
SRGAP1-202ENST00000537556 MROH2AA6NES4 1674 aa9.28□□□□□ -0.92
SRGAP1-202ENST00000537556 CEP170BQ9Y4F5 1589 aaPredicted RBP9.28□□□□□ -0.92
SRGAP1-202ENST00000537556 BCL9O00512 1426 aa9.28□□□□□ -0.92
SRGAP1-202ENST00000537556 PPP1R3GB7ZBB8 358 aa9.28□□□□□ -0.92
SRGAP1-202ENST00000537556 E7EWF7 191 aa9.28□□□□□ -0.92
SRGAP1-202ENST00000537556 BIRC5O15392 142 aa9.28□□□□□ -0.92
SRGAP1-202ENST00000537556 ACTN4O43707 911 aaKnown RBP9.28□□□□□ -0.92
SRGAP1-202ENST00000537556 ATP9AO75110 1047 aa9.28□□□□□ -0.92
SRGAP1-202ENST00000537556 UNC5CO95185 931 aa9.28□□□□□ -0.92
SRGAP1-202ENST00000537556 MMP13P45452 471 aa9.28□□□□□ -0.92
SRGAP1-202ENST00000537556 OCRLQ01968 901 aa9.28□□□□□ -0.92
SRGAP1-202ENST00000537556 CCDC6Q16204 474 aa9.28□□□□□ -0.92
SRGAP1-202ENST00000537556 TMEM259Q4ZIN3 620 aa9.28□□□□□ -0.92
SRGAP1-202ENST00000537556 USHBP1Q8N6Y0 703 aa9.28□□□□□ -0.92
SRGAP1-202ENST00000537556 PPFIBP2Q8ND30 876 aa9.28□□□□□ -0.92
SRGAP1-202ENST00000537556 ZCRB1Q8TBF4 217 aaKnown RBP9.28□□□□□ -0.92
SRGAP1-202ENST00000537556 ATXN2LQ8WWM7 1075 aaKnown RBP9.28□□□□□ -0.92
SRGAP1-202ENST00000537556 GATA6Q92908 595 aa9.28□□□□□ -0.92
SRGAP1-202ENST00000537556 FERMT2Q96AC1 680 aa9.28□□□□□ -0.92
SRGAP1-202ENST00000537556 EAF2Q96CJ1 260 aaPredicted RBP9.28□□□□□ -0.92
SRGAP1-202ENST00000537556 SELENOSQ9BQE4 189 aa9.28□□□□□ -0.92
SRGAP1-202ENST00000537556 POLR3CQ9BUI4 534 aaPredicted RBP9.28□□□□□ -0.92
SRGAP1-202ENST00000537556 PUS3Q9BZE2 481 aaKnown RBP9.28□□□□□ -0.92
SRGAP1-202ENST00000537556 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.28□□□□□ -0.92
SRGAP1-202ENST00000537556 EHD2Q9NZN4 543 aa9.28□□□□□ -0.92
SRGAP1-202ENST00000537556 CABP1Q9NZU7 370 aa9.28□□□□□ -0.92
SRGAP1-202ENST00000537556 RWDD2AQ9UIY3 292 aa9.28□□□□□ -0.92
SRGAP1-202ENST00000537556 CACNA1FO60840 1977 aa9.28□□□□□ -0.92
SRGAP1-202ENST00000537556 MYH7P12883 1935 aa9.28□□□□□ -0.92
SRGAP1-202ENST00000537556 hCG_2014768A0A024R1R8 64 aa9.28□□□□□ -0.92
SRGAP1-202ENST00000537556 DCDC2CA8MYV0 355 aa9.28□□□□□ -0.92
SRGAP1-202ENST00000537556 P4HA2O15460 535 aa9.28□□□□□ -0.92
SRGAP1-202ENST00000537556 MOCS3O95396 460 aa9.28□□□□□ -0.92
SRGAP1-202ENST00000537556 PTPREP23469 700 aa9.28□□□□□ -0.92
SRGAP1-202ENST00000537556 CYP27A1Q02318 531 aa9.28□□□□□ -0.92
SRGAP1-202ENST00000537556 LIN52Q52LA3 116 aa9.28□□□□□ -0.92
SRGAP1-202ENST00000537556 SPDYCQ5MJ68 293 aa9.28□□□□□ -0.92
SRGAP1-202ENST00000537556 TBC1D9BQ66K14 1250 aa9.28□□□□□ -0.92
SRGAP1-202ENST00000537556 C16orf87Q6PH81 154 aa9.28□□□□□ -0.92
SRGAP1-202ENST00000537556 CROCCP2Q86T23 111 aa9.28□□□□□ -0.92
SRGAP1-202ENST00000537556 ZC3H18Q86VM9 953 aaKnown RBP9.28□□□□□ -0.92
SRGAP1-202ENST00000537556 MAP7D3Q8IWC1 876 aa9.28□□□□□ -0.92
SRGAP1-202ENST00000537556 IQCF2Q8IXL9 164 aa9.28□□□□□ -0.92
SRGAP1-202ENST00000537556 SLC15A3Q8IY34 581 aa9.28□□□□□ -0.92
SRGAP1-202ENST00000537556 GRAMD1CQ8IYS0 662 aa9.28□□□□□ -0.92
SRGAP1-202ENST00000537556 SAMD3Q8N6K7 520 aa9.28□□□□□ -0.92
SRGAP1-202ENST00000537556 ABTB1Q969K4 478 aaPredicted RBP9.28□□□□□ -0.92
SRGAP1-202ENST00000537556 GJB4Q9NTQ9 266 aa9.28□□□□□ -0.92
SRGAP1-202ENST00000537556 SUCLA2Q9P2R7 463 aaPredicted RBP9.28□□□□□ -0.92
SRGAP1-202ENST00000537556 FBXL5Q9UKA1 691 aa9.28□□□□□ -0.92
SRGAP1-202ENST00000537556 CTNND2Q9UQB3 1225 aa9.28□□□□□ -0.92
SRGAP1-202ENST00000537556 TRIM43BA6NCK2 446 aa9.27□□□□□ -0.92
SRGAP1-202ENST00000537556 OAS1P00973 400 aaKnown RBP9.27□□□□□ -0.92
SRGAP1-202ENST00000537556 POTEJP0CG39 1038 aa9.27□□□□□ -0.92
SRGAP1-202ENST00000537556 TRIM21P19474 475 aaKnown RBP9.27□□□□□ -0.92
SRGAP1-202ENST00000537556 PLOD1Q02809 727 aaPredicted RBP9.27□□□□□ -0.92
SRGAP1-202ENST00000537556 SF3A3Q12874 501 aaKnown RBP eCLIP9.27□□□□□ -0.92
SRGAP1-202ENST00000537556 CLPPQ16740 277 aaPredicted RBP9.27□□□□□ -0.92
SRGAP1-202ENST00000537556 GRAMD4Q6IC98 578 aa9.27□□□□□ -0.92
SRGAP1-202ENST00000537556 NME8Q8N427 588 aa9.27□□□□□ -0.92
SRGAP1-202ENST00000537556 LRRC8CQ8TDW0 803 aa9.27□□□□□ -0.92
SRGAP1-202ENST00000537556 GFM2Q969S9 779 aaKnown RBP9.27□□□□□ -0.92
SRGAP1-202ENST00000537556 ABHD8Q96I13 439 aa9.27□□□□□ -0.92
SRGAP1-202ENST00000537556 ALG1Q9BT22 464 aa9.27□□□□□ -0.92
SRGAP1-202ENST00000537556 DSCC1Q9BVC3 393 aa9.27□□□□□ -0.92
SRGAP1-202ENST00000537556 NMRK1Q9NWW6 199 aa9.27□□□□□ -0.92
SRGAP1-202ENST00000537556 TBC1D7Q9P0N9 293 aa9.27□□□□□ -0.92
SRGAP1-202ENST00000537556 PNMA2Q9UL42 364 aa9.27□□□□□ -0.92
SRGAP1-202ENST00000537556 CD2APQ9Y5K6 639 aa9.27□□□□□ -0.92
SRGAP1-202ENST00000537556 USH1CQ9Y6N9 552 aa9.27□□□□□ -0.92
SRGAP1-202ENST00000537556 COL15A1P39059 1388 aa9.27□□□□□ -0.93
SRGAP1-202ENST00000537556 MYH13Q9UKX3 1938 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms