RNA–Protein interactions for RNA: ENST00000534091.1

LDLRAD3-206, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 4

Gene LDLRAD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-206ENST00000534091 COL6A1P12109 1028 aa11.36□□□□□ -0.59
LDLRAD3-206ENST00000534091 AKR1A1P14550 325 aa11.36□□□□□ -0.59
LDLRAD3-206ENST00000534091 FXR2P51116 673 aaKnown RBP eCLIP11.36□□□□□ -0.59
LDLRAD3-206ENST00000534091 ARHGAP4P98171 946 aa11.36□□□□□ -0.59
LDLRAD3-206ENST00000534091 IL17AQ16552 155 aa11.36□□□□□ -0.59
LDLRAD3-206ENST00000534091 Q4G0T1 1027 aa11.36□□□□□ -0.59
LDLRAD3-206ENST00000534091 L1TD1Q5T7N2 865 aaKnown RBP11.36□□□□□ -0.59
LDLRAD3-206ENST00000534091 DTHD1Q6ZMT9 781 aa11.36□□□□□ -0.59
LDLRAD3-206ENST00000534091 GAS2L3Q86XJ1 694 aa11.36□□□□□ -0.59
LDLRAD3-206ENST00000534091 FAM133AQ8N9E0 248 aa11.36□□□□□ -0.59
LDLRAD3-206ENST00000534091 SYMPKQ92797 1274 aaKnown RBP11.36□□□□□ -0.59
LDLRAD3-206ENST00000534091 PAWRQ96IZ0 340 aaKnown RBP11.36□□□□□ -0.59
LDLRAD3-206ENST00000534091 AGBL1Q96MI9 1066 aa11.36□□□□□ -0.59
LDLRAD3-206ENST00000534091 MPHOSPH6Q99547 160 aaKnown RBP11.36□□□□□ -0.59
LDLRAD3-206ENST00000534091 CCSER1Q9C0I3 900 aa11.36□□□□□ -0.59
LDLRAD3-206ENST00000534091 TSPY26PQ9H489 355 aa11.36□□□□□ -0.59
LDLRAD3-206ENST00000534091 A1CFQ9NQ94 594 aaKnown RBP11.36□□□□□ -0.59
LDLRAD3-206ENST00000534091 ADD3Q9UEY8 706 aaKnown RBP11.36□□□□□ -0.59
LDLRAD3-206ENST00000534091 SLC26A4O43511 780 aa11.35□□□□□ -0.59
LDLRAD3-206ENST00000534091 TDP2O95551 362 aa11.35□□□□□ -0.59
LDLRAD3-206ENST00000534091 PGK2P07205 417 aa11.35□□□□□ -0.59
LDLRAD3-206ENST00000534091 CCDC192P0DO97 292 aa11.35□□□□□ -0.59
LDLRAD3-206ENST00000534091 RARBP10826 455 aa11.35□□□□□ -0.59
LDLRAD3-206ENST00000534091 ALAS1P13196 640 aa11.35□□□□□ -0.59
LDLRAD3-206ENST00000534091 TAL1P17542 331 aaPredicted RBP11.35□□□□□ -0.59
LDLRAD3-206ENST00000534091 CNGA1P29973 690 aa11.35□□□□□ -0.59
LDLRAD3-206ENST00000534091 TXLNAP40222 546 aa11.35□□□□□ -0.59
LDLRAD3-206ENST00000534091 MRE11P49959 708 aa11.35□□□□□ -0.59
LDLRAD3-206ENST00000534091 MNX1P50219 401 aaPredicted RBP11.35□□□□□ -0.59
LDLRAD3-206ENST00000534091 CALCRLQ16602 461 aa11.35□□□□□ -0.59
LDLRAD3-206ENST00000534091 KANK3Q6NY19 840 aa11.35□□□□□ -0.59
LDLRAD3-206ENST00000534091 KRBA2Q6ZNG9 492 aa11.35□□□□□ -0.59
LDLRAD3-206ENST00000534091 POTEDQ86YR6 584 aa11.35□□□□□ -0.59
LDLRAD3-206ENST00000534091 TRPV1Q8NER1 839 aa11.35□□□□□ -0.59
LDLRAD3-206ENST00000534091 DNERQ8NFT8 737 aa11.35□□□□□ -0.59
LDLRAD3-206ENST00000534091 MORC4Q8TE76 937 aa11.35□□□□□ -0.59
LDLRAD3-206ENST00000534091 CCDC34Q96HJ3 373 aa11.35□□□□□ -0.59
LDLRAD3-206ENST00000534091 RAB34Q9BZG1 259 aa11.35□□□□□ -0.59
LDLRAD3-206ENST00000534091 CYP39A1Q9NYL5 469 aa11.35□□□□□ -0.59
LDLRAD3-206ENST00000534091 DDX25Q9UHL0 483 aaKnown RBP11.35□□□□□ -0.59
LDLRAD3-206ENST00000534091 FAM184BQ9ULE4 1060 aa11.35□□□□□ -0.59
LDLRAD3-206ENST00000534091 KBTBD13C9JR72 458 aa11.34□□□□□ -0.59
LDLRAD3-206ENST00000534091 ACTN4O43707 911 aaKnown RBP11.34□□□□□ -0.59
LDLRAD3-206ENST00000534091 SLC37A4O43826 429 aa11.34□□□□□ -0.59
LDLRAD3-206ENST00000534091 CAVIN2O95810 425 aa11.34□□□□□ -0.59
LDLRAD3-206ENST00000534091 CFBP00751 764 aa11.34□□□□□ -0.59
LDLRAD3-206ENST00000534091 ZNF865P0CJ78 1059 aaPredicted RBP11.34□□□□□ -0.59
LDLRAD3-206ENST00000534091 PDIA5Q14554 519 aa11.34□□□□□ -0.59
LDLRAD3-206ENST00000534091 CAMK4Q16566 473 aa11.34□□□□□ -0.59
LDLRAD3-206ENST00000534091 TMEM266Q2M3C6 531 aa11.34□□□□□ -0.59
LDLRAD3-206ENST00000534091 C1orf53Q5VUE5 145 aa11.34□□□□□ -0.59
LDLRAD3-206ENST00000534091 RNF180Q86T96 592 aa11.34□□□□□ -0.59
LDLRAD3-206ENST00000534091 IGSF22Q8N9C0 903 aa11.34□□□□□ -0.59
LDLRAD3-206ENST00000534091 DPF3Q92784 378 aa11.34□□□□□ -0.59
LDLRAD3-206ENST00000534091 SDF4Q9BRK5 362 aa11.34□□□□□ -0.59
LDLRAD3-206ENST00000534091 TSEN34Q9BSV6 310 aaKnown RBP11.34□□□□□ -0.59
LDLRAD3-206ENST00000534091 KCNMB3Q9NPA1 279 aa11.34□□□□□ -0.59
LDLRAD3-206ENST00000534091 HOOK1Q9UJC3 728 aaKnown RBP11.34□□□□□ -0.59
LDLRAD3-206ENST00000534091 BRCA2P51587 3418 aa11.34□□□□□ -0.59
LDLRAD3-206ENST00000534091 NFIBO00712 420 aa11.33□□□□□ -0.6
LDLRAD3-206ENST00000534091 POLR2DO15514 142 aaKnown RBP11.33□□□□□ -0.6
LDLRAD3-206ENST00000534091 EVI5O60447 810 aa11.33□□□□□ -0.6
LDLRAD3-206ENST00000534091 DUSP11O75319 330 aaKnown RBP11.33□□□□□ -0.6
LDLRAD3-206ENST00000534091 SNAI1O95863 264 aaPredicted RBP11.33□□□□□ -0.6
LDLRAD3-206ENST00000534091 HOXA13P31271 388 aaPredicted RBP11.33□□□□□ -0.6
LDLRAD3-206ENST00000534091 NKX3-2P78367 333 aa11.33□□□□□ -0.6
LDLRAD3-206ENST00000534091 SETQ01105 290 aaPredicted RBP11.33□□□□□ -0.6
LDLRAD3-206ENST00000534091 TYRO3Q06418 890 aa11.33□□□□□ -0.6
LDLRAD3-206ENST00000534091 ACVR2BQ13705 512 aa11.33□□□□□ -0.6
LDLRAD3-206ENST00000534091 E2F4Q16254 413 aa11.33□□□□□ -0.6
LDLRAD3-206ENST00000534091 SPECC1Q5M775 1068 aa11.33□□□□□ -0.6
LDLRAD3-206ENST00000534091 USP49Q70CQ1 688 aa11.33□□□□□ -0.6
LDLRAD3-206ENST00000534091 SLFN12Q8IYM2 578 aa11.33□□□□□ -0.6
LDLRAD3-206ENST00000534091 CNNM3Q8NE01 707 aa11.33□□□□□ -0.6
LDLRAD3-206ENST00000534091 SYTL5Q8TDW5 730 aaPredicted RBP11.33□□□□□ -0.6
LDLRAD3-206ENST00000534091 HAS1Q92839 578 aa11.33□□□□□ -0.6
LDLRAD3-206ENST00000534091 LENG9Q96B70 501 aa11.33□□□□□ -0.6
LDLRAD3-206ENST00000534091 EPSTI1Q96J88 318 aa11.33□□□□□ -0.6
LDLRAD3-206ENST00000534091 GRPEL1Q9HAV7 217 aa11.33□□□□□ -0.6
LDLRAD3-206ENST00000534091 SPC25Q9HBM1 224 aa11.33□□□□□ -0.6
LDLRAD3-206ENST00000534091 HOMER2Q9NSB8 354 aa11.33□□□□□ -0.6
LDLRAD3-206ENST00000534091 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.33□□□□□ -0.6
LDLRAD3-206ENST00000534091 KIAA1468Q9P260 1216 aa11.33□□□□□ -0.6
LDLRAD3-206ENST00000534091 TUBE1Q9UJT0 475 aa11.33□□□□□ -0.6
LDLRAD3-206ENST00000534091 Q9Y3F1 56 aa11.33□□□□□ -0.6
LDLRAD3-206ENST00000534091 MCM3APO60318 1980 aa11.32□□□□□ -0.6
LDLRAD3-206ENST00000534091 TNRC18O15417 2968 aaPredicted RBP11.32□□□□□ -0.6
LDLRAD3-206ENST00000534091 MOXD2PA6NHM9 499 aa11.32□□□□□ -0.6
LDLRAD3-206ENST00000534091 SLFN14P0C7P3 912 aa11.32□□□□□ -0.6
LDLRAD3-206ENST00000534091 CST5P28325 142 aaPredicted RBP11.32□□□□□ -0.6
LDLRAD3-206ENST00000534091 LONRF3Q496Y0 759 aa11.32□□□□□ -0.6
LDLRAD3-206ENST00000534091 MUM1L1Q5H9M0 696 aa11.32□□□□□ -0.6
LDLRAD3-206ENST00000534091 SASS6Q6UVJ0 657 aa11.32□□□□□ -0.6
LDLRAD3-206ENST00000534091 RNF207Q6ZRF8 634 aa11.32□□□□□ -0.6
LDLRAD3-206ENST00000534091 ARMCX2Q7L311 632 aa11.32□□□□□ -0.6
LDLRAD3-206ENST00000534091 NIPA1Q7RTP0 329 aa11.32□□□□□ -0.6
LDLRAD3-206ENST00000534091 SH3RF1Q7Z6J0 888 aa11.32□□□□□ -0.6
LDLRAD3-206ENST00000534091 FCHSD1Q86WN1 690 aa11.32□□□□□ -0.6
LDLRAD3-206ENST00000534091 CKAP2LQ8IYA6 745 aa11.32□□□□□ -0.6
LDLRAD3-206ENST00000534091 IQUBQ8NA54 791 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms