RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 UPF3AQ9H1J1 476 aaKnown RBP12.73□□□□□ -0.37
TRAPPC4-211ENST00000533012 NFASCO94856 1347 aa12.72□□□□□ -0.37
TRAPPC4-211ENST00000533012 A6NJR5 290 aa12.72□□□□□ -0.37
TRAPPC4-211ENST00000533012 KBTBD13C9JR72 458 aa12.72□□□□□ -0.37
TRAPPC4-211ENST00000533012 DNM1LO00429 736 aa12.72□□□□□ -0.37
TRAPPC4-211ENST00000533012 NOP56O00567 594 aaKnown RBP12.72□□□□□ -0.37
TRAPPC4-211ENST00000533012 TBX3O15119 743 aa12.72□□□□□ -0.37
TRAPPC4-211ENST00000533012 KPNA6O60684 536 aa12.72□□□□□ -0.37
TRAPPC4-211ENST00000533012 PPFIA4O75335 1185 aa12.72□□□□□ -0.37
TRAPPC4-211ENST00000533012 FARP2O94887 1054 aaPredicted RBP12.72□□□□□ -0.37
TRAPPC4-211ENST00000533012 ZSCAN22P10073 491 aaPredicted RBP12.72□□□□□ -0.37
TRAPPC4-211ENST00000533012 PTGS1P23219 599 aa12.72□□□□□ -0.37
TRAPPC4-211ENST00000533012 MCM7P33993 719 aa12.72□□□□□ -0.37
TRAPPC4-211ENST00000533012 TOB1P50616 345 aaPredicted RBP12.72□□□□□ -0.37
TRAPPC4-211ENST00000533012 ORC2Q13416 577 aaPredicted RBP12.72□□□□□ -0.37
TRAPPC4-211ENST00000533012 LRRC41Q15345 812 aa12.72□□□□□ -0.37
TRAPPC4-211ENST00000533012 ZNF174Q15697 407 aa12.72□□□□□ -0.37
TRAPPC4-211ENST00000533012 PIAS4Q8N2W9 510 aaPredicted RBP12.72□□□□□ -0.37
TRAPPC4-211ENST00000533012 AFG1LQ8WV93 481 aa12.72□□□□□ -0.37
TRAPPC4-211ENST00000533012 FAM20AQ96MK3 541 aa12.72□□□□□ -0.37
TRAPPC4-211ENST00000533012 UIMC1Q96RL1 719 aa12.72□□□□□ -0.37
TRAPPC4-211ENST00000533012 RIT2Q99578 217 aa12.72□□□□□ -0.37
TRAPPC4-211ENST00000533012 TSEN34Q9BSV6 310 aaKnown RBP12.72□□□□□ -0.37
TRAPPC4-211ENST00000533012 BCAS3Q9H6U6 928 aa12.72□□□□□ -0.37
TRAPPC4-211ENST00000533012 SLC9A2Q9UBY0 812 aa12.72□□□□□ -0.37
TRAPPC4-211ENST00000533012 TCEAL9Q9UHQ7 104 aa12.72□□□□□ -0.37
TRAPPC4-211ENST00000533012 CTAGE5O15320 804 aa12.71□□□□□ -0.37
TRAPPC4-211ENST00000533012 SLC37A4O43826 429 aa12.71□□□□□ -0.37
TRAPPC4-211ENST00000533012 NEMFO60524 1076 aa12.71□□□□□ -0.37
TRAPPC4-211ENST00000533012 CST5P28325 142 aaPredicted RBP12.71□□□□□ -0.37
TRAPPC4-211ENST00000533012 SOX10P56693 466 aa12.71□□□□□ -0.37
TRAPPC4-211ENST00000533012 BEX3Q00994 111 aa12.71□□□□□ -0.37
TRAPPC4-211ENST00000533012 SP4Q02446 784 aa12.71□□□□□ -0.37
TRAPPC4-211ENST00000533012 RESTQ13127 1097 aa12.71□□□□□ -0.37
TRAPPC4-211ENST00000533012 ITGB3BPQ13352 177 aaPredicted RBP12.71□□□□□ -0.37
TRAPPC4-211ENST00000533012 KCNA10Q16322 511 aa12.71□□□□□ -0.37
TRAPPC4-211ENST00000533012 CALCRLQ16602 461 aa12.71□□□□□ -0.37
TRAPPC4-211ENST00000533012 DGKDQ16760 1214 aa12.71□□□□□ -0.37
TRAPPC4-211ENST00000533012 LRCH2Q5VUJ6 765 aa12.71□□□□□ -0.37
TRAPPC4-211ENST00000533012 SLFN12Q8IYM2 578 aa12.71□□□□□ -0.37
TRAPPC4-211ENST00000533012 PPTC7Q8NI37 304 aa12.71□□□□□ -0.37
TRAPPC4-211ENST00000533012 SEPT1Q8WYJ6 367 aa12.71□□□□□ -0.37
TRAPPC4-211ENST00000533012 SLC5A5Q92911 643 aa12.71□□□□□ -0.37
TRAPPC4-211ENST00000533012 JPH1Q9HDC5 661 aaPredicted RBP12.71□□□□□ -0.37
TRAPPC4-211ENST00000533012 KCNMB3Q9NPA1 279 aa12.71□□□□□ -0.37
TRAPPC4-211ENST00000533012 MYADML2A6NDP7 307 aa12.7□□□□□ -0.38
TRAPPC4-211ENST00000533012 MOXD2PA6NHM9 499 aa12.7□□□□□ -0.38
TRAPPC4-211ENST00000533012 DDX39AO00148 427 aaKnown RBP12.7□□□□□ -0.38
TRAPPC4-211ENST00000533012 WNT7AO00755 349 aa12.7□□□□□ -0.38
TRAPPC4-211ENST00000533012 DHX15O43143 795 aaKnown RBP12.7□□□□□ -0.38
TRAPPC4-211ENST00000533012 GAS7O60861 476 aa12.7□□□□□ -0.38
TRAPPC4-211ENST00000533012 ASGR1P07306 291 aa12.7□□□□□ -0.38
TRAPPC4-211ENST00000533012 MMP3P08254 477 aa12.7□□□□□ -0.38
TRAPPC4-211ENST00000533012 MYL3P08590 195 aa12.7□□□□□ -0.38
TRAPPC4-211ENST00000533012 IRX5P78411 483 aaPredicted RBP12.7□□□□□ -0.38
TRAPPC4-211ENST00000533012 HSDL1Q3SXM5 330 aa12.7□□□□□ -0.38
TRAPPC4-211ENST00000533012 FOXD4L5Q5VV16 416 aaPredicted RBP12.7□□□□□ -0.38
TRAPPC4-211ENST00000533012 CCSAPQ6IQ19 270 aaPredicted RBP12.7□□□□□ -0.38
TRAPPC4-211ENST00000533012 ETNPPLQ8TBG4 499 aa12.7□□□□□ -0.38
TRAPPC4-211ENST00000533012 FOXD4L4Q8WXT5 416 aaPredicted RBP12.7□□□□□ -0.38
TRAPPC4-211ENST00000533012 VTI1AQ96AJ9 217 aa12.7□□□□□ -0.38
TRAPPC4-211ENST00000533012 GPR20Q99678 358 aa12.7□□□□□ -0.38
TRAPPC4-211ENST00000533012 TEKT3Q9BXF9 490 aa12.7□□□□□ -0.38
TRAPPC4-211ENST00000533012 POLR3EQ9NVU0 708 aa12.7□□□□□ -0.38
TRAPPC4-211ENST00000533012 PCDHA12Q9UN75 941 aa12.7□□□□□ -0.38
TRAPPC4-211ENST00000533012 PCDHB6Q9Y5E3 794 aa12.7□□□□□ -0.38
TRAPPC4-211ENST00000533012 PSMD10O75832 226 aa12.69□□□□□ -0.38
TRAPPC4-211ENST00000533012 CABYRO75952 493 aa12.69□□□□□ -0.38
TRAPPC4-211ENST00000533012 TXKP42681 527 aa12.69□□□□□ -0.38
TRAPPC4-211ENST00000533012 ACLYP53396 1101 aa12.69□□□□□ -0.38
TRAPPC4-211ENST00000533012 ACTR2P61160 394 aa12.69□□□□□ -0.38
TRAPPC4-211ENST00000533012 NUCB2P80303 420 aa12.69□□□□□ -0.38
TRAPPC4-211ENST00000533012 KRT76Q01546 638 aa12.69□□□□□ -0.38
TRAPPC4-211ENST00000533012 PKP1Q13835 747 aa12.69□□□□□ -0.38
TRAPPC4-211ENST00000533012 NBR1Q14596 966 aa12.69□□□□□ -0.38
TRAPPC4-211ENST00000533012 ZNF746Q6NUN9 644 aaPredicted RBP12.69□□□□□ -0.38
TRAPPC4-211ENST00000533012 MIS18BP1Q6P0N0 1132 aa12.69□□□□□ -0.38
TRAPPC4-211ENST00000533012 NECAB2Q7Z6G3 386 aa12.69□□□□□ -0.38
TRAPPC4-211ENST00000533012 HAS1Q92839 578 aa12.69□□□□□ -0.38
TRAPPC4-211ENST00000533012 GJA10Q969M2 543 aa12.69□□□□□ -0.38
TRAPPC4-211ENST00000533012 PAWRQ96IZ0 340 aaKnown RBP12.69□□□□□ -0.38
TRAPPC4-211ENST00000533012 GLT1D1Q96MS3 346 aa12.69□□□□□ -0.38
TRAPPC4-211ENST00000533012 MTMR9Q96QG7 549 aa12.69□□□□□ -0.38
TRAPPC4-211ENST00000533012 MTG1Q9BT17 334 aaPredicted RBP12.69□□□□□ -0.38
TRAPPC4-211ENST00000533012 ANP32EQ9BTT0 268 aa12.69□□□□□ -0.38
TRAPPC4-211ENST00000533012 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.69□□□□□ -0.38
TRAPPC4-211ENST00000533012 CEP131Q9UPN4 1083 aa12.69□□□□□ -0.38
TRAPPC4-211ENST00000533012 PHF24Q9UPV7 400 aa12.69□□□□□ -0.38
TRAPPC4-211ENST00000533012 SAMM50Q9Y512 469 aa12.69□□□□□ -0.38
TRAPPC4-211ENST00000533012 ELP1O95163 1332 aa12.68□□□□□ -0.38
TRAPPC4-211ENST00000533012 GSTTP1A0A1W2PQM5 241 aa12.68□□□□□ -0.38
TRAPPC4-211ENST00000533012 LAD1O00515 517 aa12.68□□□□□ -0.38
TRAPPC4-211ENST00000533012 ATG7O95352 703 aa12.68□□□□□ -0.38
TRAPPC4-211ENST00000533012 BRD1O95696 1058 aa12.68□□□□□ -0.38
TRAPPC4-211ENST00000533012 BMP15O95972 392 aa12.68□□□□□ -0.38
TRAPPC4-211ENST00000533012 CCNE2O96020 404 aa12.68□□□□□ -0.38
TRAPPC4-211ENST00000533012 F13A1P00488 732 aa12.68□□□□□ -0.38
TRAPPC4-211ENST00000533012 OR52Z1P0C646 297 aa12.68□□□□□ -0.38
TRAPPC4-211ENST00000533012 SFNP31947 248 aa12.68□□□□□ -0.38
TRAPPC4-211ENST00000533012 TCF7P36402 384 aaPredicted RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms