RNA–Protein interactions for RNA: ENST00000526468.1

CAPN1-204, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 690 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-204ENST00000526468 PLA2G5P39877 138 aa13.57□□□□□ -0.24
CAPN1-204ENST00000526468 ERVK-21P61565 698 aa13.57□□□□□ -0.24
CAPN1-204ENST00000526468 HIC1Q14526 733 aa13.57□□□□□ -0.24
CAPN1-204ENST00000526468 GNPTABQ3T906 1256 aa13.57□□□□□ -0.24
CAPN1-204ENST00000526468 STOX1Q6ZVD7 989 aa13.57□□□□□ -0.24
CAPN1-204ENST00000526468 RALYLQ86SE5 291 aaKnown RBP13.57□□□□□ -0.24
CAPN1-204ENST00000526468 SERINC5Q86VE9 423 aa13.57□□□□□ -0.24
CAPN1-204ENST00000526468 FBXO22Q8NEZ5 403 aa13.57□□□□□ -0.24
CAPN1-204ENST00000526468 PIBF1Q8WXW3 757 aa13.57□□□□□ -0.24
CAPN1-204ENST00000526468 ATP6V0A1Q93050 837 aa13.57□□□□□ -0.24
CAPN1-204ENST00000526468 MTMR8Q96EF0 704 aa13.57□□□□□ -0.24
CAPN1-204ENST00000526468 SUGCTQ9HAC7 445 aa13.57□□□□□ -0.24
CAPN1-204ENST00000526468 MAP3K20Q9NYL2 800 aaKnown RBP13.57□□□□□ -0.24
CAPN1-204ENST00000526468 PALM3A6NDB9 673 aaPredicted RBP13.56□□□□□ -0.24
CAPN1-204ENST00000526468 RSPH10B2B2RC85 870 aa13.56□□□□□ -0.24
CAPN1-204ENST00000526468 IFIT3O14879 490 aaKnown RBP13.56□□□□□ -0.24
CAPN1-204ENST00000526468 PPFIA4O75335 1185 aa13.56□□□□□ -0.24
CAPN1-204ENST00000526468 RSPH10BP0C881 870 aa13.56□□□□□ -0.24
CAPN1-204ENST00000526468 SMIM10L2AP0DMW4 78 aa13.56□□□□□ -0.24
CAPN1-204ENST00000526468 SMIM10L2BP0DMW5 78 aa13.56□□□□□ -0.24
CAPN1-204ENST00000526468 SP2Q02086 613 aa13.56□□□□□ -0.24
CAPN1-204ENST00000526468 SP4Q02446 784 aa13.56□□□□□ -0.24
CAPN1-204ENST00000526468 TRAF1Q13077 416 aa13.56□□□□□ -0.24
CAPN1-204ENST00000526468 WTAPQ15007 396 aa13.56□□□□□ -0.24
CAPN1-204ENST00000526468 SART3Q15020 963 aaKnown RBP13.56□□□□□ -0.24
CAPN1-204ENST00000526468 SLC35G1Q2M3R5 365 aa13.56□□□□□ -0.24
CAPN1-204ENST00000526468 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.56□□□□□ -0.24
CAPN1-204ENST00000526468 VSIG10LQ86VR7 867 aa13.56□□□□□ -0.24
CAPN1-204ENST00000526468 TRIM50Q86XT4 487 aa13.56□□□□□ -0.24
CAPN1-204ENST00000526468 EXOC6Q8TAG9 804 aa13.56□□□□□ -0.24
CAPN1-204ENST00000526468 FAM122AQ96E09 287 aa13.56□□□□□ -0.24
CAPN1-204ENST00000526468 C17orf80Q9BSJ5 609 aa13.56□□□□□ -0.24
CAPN1-204ENST00000526468 C16orf70Q9BSU1 422 aa13.56□□□□□ -0.24
CAPN1-204ENST00000526468 BACH2Q9BYV9 841 aa13.56□□□□□ -0.24
CAPN1-204ENST00000526468 UBE2ZQ9H832 354 aaPredicted RBP13.56□□□□□ -0.24
CAPN1-204ENST00000526468 LMCD1Q9NZU5 365 aa13.56□□□□□ -0.24
CAPN1-204ENST00000526468 HCN4Q9Y3Q4 1203 aa13.56□□□□□ -0.24
CAPN1-204ENST00000526468 FRMPD4Q14CM0 1322 aa13.56□□□□□ -0.24
CAPN1-204ENST00000526468 H3BRB1 525 aa13.55□□□□□ -0.24
CAPN1-204ENST00000526468 GSPT1P15170 499 aaKnown RBP13.55□□□□□ -0.24
CAPN1-204ENST00000526468 TTC22Q5TAA0 569 aa13.55□□□□□ -0.24
CAPN1-204ENST00000526468 SAMD3Q8N6K7 520 aa13.55□□□□□ -0.24
CAPN1-204ENST00000526468 DBF4BQ8NFT6 615 aa13.55□□□□□ -0.24
CAPN1-204ENST00000526468 SEPT8Q92599 483 aa13.55□□□□□ -0.24
CAPN1-204ENST00000526468 YME1L1Q96TA2 773 aa13.55□□□□□ -0.24
CAPN1-204ENST00000526468 TUT1Q9H6E5 874 aaKnown RBP13.55□□□□□ -0.24
CAPN1-204ENST00000526468 SENP2Q9HC62 589 aa13.55□□□□□ -0.24
CAPN1-204ENST00000526468 ZNF215Q9UL58 517 aaPredicted RBP13.55□□□□□ -0.24
CAPN1-204ENST00000526468 INSL6Q9Y581 213 aa13.55□□□□□ -0.24
CAPN1-204ENST00000526468 U3KPZ7 1027 aaPredicted RBP13.55□□□□□ -0.24
CAPN1-204ENST00000526468 PNMA6FA0A0J9YX94 578 aa13.54□□□□□ -0.24
CAPN1-204ENST00000526468 TREHO43280 583 aa13.54□□□□□ -0.24
CAPN1-204ENST00000526468 CYP21A2P08686 494 aa13.54□□□□□ -0.24
CAPN1-204ENST00000526468 TGFB3P10600 412 aa13.54□□□□□ -0.24
CAPN1-204ENST00000526468 KCNA5P22460 613 aa13.54□□□□□ -0.24
CAPN1-204ENST00000526468 TIGD5Q53EQ6 642 aa13.54□□□□□ -0.24
CAPN1-204ENST00000526468 METTL7BQ6UX53 244 aa13.54□□□□□ -0.24
CAPN1-204ENST00000526468 CATIPQ7Z7H3 387 aa13.54□□□□□ -0.24
CAPN1-204ENST00000526468 EPHX3Q9H6B9 360 aa13.54□□□□□ -0.24
CAPN1-204ENST00000526468 RIOX1Q9H6W3 641 aa13.54□□□□□ -0.24
CAPN1-204ENST00000526468 FAM86C2PA6NEL3 165 aa13.53□□□□□ -0.24
CAPN1-204ENST00000526468 FIBPO43427 364 aa13.53□□□□□ -0.24
CAPN1-204ENST00000526468 CYTH3O43739 400 aa13.53□□□□□ -0.24
CAPN1-204ENST00000526468 CAND2O75155 1236 aa13.53□□□□□ -0.24
CAPN1-204ENST00000526468 HOXC8P31273 242 aa13.53□□□□□ -0.24
CAPN1-204ENST00000526468 ARHGAP4P98171 946 aa13.53□□□□□ -0.24
CAPN1-204ENST00000526468 MKRN4PQ13434 485 aaPredicted RBP13.53□□□□□ -0.24
CAPN1-204ENST00000526468 NEDD9Q14511 834 aa13.53□□□□□ -0.24
CAPN1-204ENST00000526468 PLEKHG4Q58EX7 1191 aa13.53□□□□□ -0.24
CAPN1-204ENST00000526468 TMEM31Q5JXX7 168 aa13.53□□□□□ -0.24
CAPN1-204ENST00000526468 UTP14CQ5TAP6 766 aaKnown RBP13.53□□□□□ -0.24
CAPN1-204ENST00000526468 CYFIP1Q7L576 1253 aa13.53□□□□□ -0.24
CAPN1-204ENST00000526468 NCOA7Q8NI08 942 aa13.53□□□□□ -0.24
CAPN1-204ENST00000526468 SMARCC2Q8TAQ2 1214 aa13.53□□□□□ -0.24
CAPN1-204ENST00000526468 SP7Q8TDD2 431 aaPredicted RBP13.53□□□□□ -0.24
CAPN1-204ENST00000526468 UBE2Q2Q8WVN8 375 aa13.53□□□□□ -0.24
CAPN1-204ENST00000526468 RUFY2Q8WXA3 655 aa13.53□□□□□ -0.24
CAPN1-204ENST00000526468 INPP4AQ96PE3 977 aaPredicted RBP13.53□□□□□ -0.24
CAPN1-204ENST00000526468 IFIH1Q9BYX4 1025 aaKnown RBP13.53□□□□□ -0.24
CAPN1-204ENST00000526468 C5orf42Q9H799 3197 aa13.52□□□□□ -0.24
CAPN1-204ENST00000526468 STAM2O75886 525 aa13.52□□□□□ -0.25
CAPN1-204ENST00000526468 UPP2O95045 317 aa13.52□□□□□ -0.25
CAPN1-204ENST00000526468 PDE4AP27815 886 aa13.52□□□□□ -0.25
CAPN1-204ENST00000526468 SSTR3P32745 418 aaPredicted RBP13.52□□□□□ -0.25
CAPN1-204ENST00000526468 MRPS9P82933 396 aaKnown RBP13.52□□□□□ -0.25
CAPN1-204ENST00000526468 HTRA4P83105 476 aaPredicted RBP13.52□□□□□ -0.25
CAPN1-204ENST00000526468 PTH1RQ03431 593 aa13.52□□□□□ -0.25
CAPN1-204ENST00000526468 TROAPQ12815 778 aa13.52□□□□□ -0.25
CAPN1-204ENST00000526468 SEMA3FQ13275 785 aa13.52□□□□□ -0.25
CAPN1-204ENST00000526468 PTPROQ16827 1216 aa13.52□□□□□ -0.25
CAPN1-204ENST00000526468 CTCFLQ8NI51 663 aaPredicted RBP13.52□□□□□ -0.25
CAPN1-204ENST00000526468 LMBR1Q8WVP7 490 aa13.52□□□□□ -0.25
CAPN1-204ENST00000526468 CUL5Q93034 780 aa13.52□□□□□ -0.25
CAPN1-204ENST00000526468 GPR20Q99678 358 aa13.52□□□□□ -0.25
CAPN1-204ENST00000526468 LRFN3Q9BTN0 628 aa13.52□□□□□ -0.25
CAPN1-204ENST00000526468 MYL10Q9BUA6 226 aa13.52□□□□□ -0.25
CAPN1-204ENST00000526468 USP26Q9BXU7 913 aa13.52□□□□□ -0.25
CAPN1-204ENST00000526468 BCAS3Q9H6U6 928 aa13.52□□□□□ -0.25
CAPN1-204ENST00000526468 SETD4Q9NVD3 440 aa13.52□□□□□ -0.25
CAPN1-204ENST00000526468 RTEL1Q9NZ71 1219 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms