RNA–Protein interactions for RNA: ENST00000526191.1

COPB1-204, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 697 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-204ENST00000526191 ZSWIM3Q96MP5 696 aa8.37□□□□□ -1.07
COPB1-204ENST00000526191 IPPKQ9H8X2 491 aa8.37□□□□□ -1.07
COPB1-204ENST00000526191 NGRNQ9NPE2 291 aaKnown RBP8.37□□□□□ -1.07
COPB1-204ENST00000526191 USP40Q9NVE5 1235 aa8.37□□□□□ -1.07
COPB1-204ENST00000526191 SNTG2Q9NY99 539 aa8.37□□□□□ -1.07
COPB1-204ENST00000526191 RBPJLQ9UBG7 517 aa8.37□□□□□ -1.07
COPB1-204ENST00000526191 NCANO14594 1321 aa8.36□□□□□ -1.07
COPB1-204ENST00000526191 KDM2BQ8NHM5 1336 aa8.36□□□□□ -1.07
COPB1-204ENST00000526191 NKRFO15226 690 aaKnown RBP eCLIP8.36□□□□□ -1.07
COPB1-204ENST00000526191 NOBOXO60393 691 aa8.36□□□□□ -1.07
COPB1-204ENST00000526191 MAFKO60675 156 aa8.36□□□□□ -1.07
COPB1-204ENST00000526191 LTFP02788 710 aa8.36□□□□□ -1.07
COPB1-204ENST00000526191 C6orf222P0C671 652 aaPredicted RBP8.36□□□□□ -1.07
COPB1-204ENST00000526191 GNAT1P11488 350 aa8.36□□□□□ -1.07
COPB1-204ENST00000526191 RPL13P26373 211 aaKnown RBP8.36□□□□□ -1.07
COPB1-204ENST00000526191 PRR31Q5SQ13 230 aa8.36□□□□□ -1.07
COPB1-204ENST00000526191 CYP4F22Q6NT55 531 aa8.36□□□□□ -1.07
COPB1-204ENST00000526191 TTLL6Q8N841 843 aa8.36□□□□□ -1.07
COPB1-204ENST00000526191 CLEC4DQ8WXI8 215 aa8.36□□□□□ -1.07
COPB1-204ENST00000526191 TEPSINQ96N21 525 aa8.36□□□□□ -1.07
COPB1-204ENST00000526191 PRRG2O14669 202 aa8.35□□□□□ -1.07
COPB1-204ENST00000526191 PRICKLE3O43900 615 aaPredicted RBP8.35□□□□□ -1.07
COPB1-204ENST00000526191 PMFBP1Q8TBY8 1022 aa8.35□□□□□ -1.07
COPB1-204ENST00000526191 ADAMTS17Q8TE56 1095 aa8.35□□□□□ -1.07
COPB1-204ENST00000526191 FAM47E-STBD1D6RA91 191 aa8.34□□□□□ -1.07
COPB1-204ENST00000526191 SUMO1P63165 101 aaKnown RBP8.34□□□□□ -1.07
COPB1-204ENST00000526191 TUSC3Q13454 348 aa8.34□□□□□ -1.07
COPB1-204ENST00000526191 RTP5Q14D33 572 aa8.34□□□□□ -1.07
COPB1-204ENST00000526191 HABP4Q5JVS0 413 aaKnown RBP8.34□□□□□ -1.07
COPB1-204ENST00000526191 TMC5Q6UXY8 1006 aa8.34□□□□□ -1.07
COPB1-204ENST00000526191 FERMT3Q86UX7 667 aa8.34□□□□□ -1.07
COPB1-204ENST00000526191 UHMK1Q8TAS1 419 aaKnown RBP8.34□□□□□ -1.07
COPB1-204ENST00000526191 CXorf38Q8TB03 319 aa8.34□□□□□ -1.07
COPB1-204ENST00000526191 DDX1Q92499 740 aaKnown RBP8.34□□□□□ -1.07
COPB1-204ENST00000526191 TELO2Q9Y4R8 837 aa8.34□□□□□ -1.07
COPB1-204ENST00000526191 DUSP10Q9Y6W6 482 aa8.34□□□□□ -1.07
COPB1-204ENST00000526191 DDX3XO00571 662 aaKnown RBP eCLIP8.33□□□□□ -1.08
COPB1-204ENST00000526191 SYN1P17600 705 aa8.33□□□□□ -1.08
COPB1-204ENST00000526191 BUD31P41223 144 aaPredicted RBP8.33□□□□□ -1.08
COPB1-204ENST00000526191 GJA9P57773 515 aa8.33□□□□□ -1.08
COPB1-204ENST00000526191 SPIRE1Q08AE8 756 aa8.33□□□□□ -1.08
COPB1-204ENST00000526191 MCTP2Q6DN12 878 aa8.33□□□□□ -1.08
COPB1-204ENST00000526191 DPH6Q7L8W6 267 aa8.33□□□□□ -1.08
COPB1-204ENST00000526191 MAMDC2Q7Z304 686 aaPredicted RBP8.33□□□□□ -1.08
COPB1-204ENST00000526191 ALG1Q9BT22 464 aa8.33□□□□□ -1.08
COPB1-204ENST00000526191 SF3A1Q15459 793 aaKnown RBP8.32□□□□□ -1.08
COPB1-204ENST00000526191 RGL3Q3MIN7 710 aa8.32□□□□□ -1.08
COPB1-204ENST00000526191 MTDHQ86UE4 582 aaKnown RBP8.32□□□□□ -1.08
COPB1-204ENST00000526191 PROSER1Q86XN7 944 aa8.32□□□□□ -1.08
COPB1-204ENST00000526191 TRIM48Q8IWZ4 208 aa8.32□□□□□ -1.08
COPB1-204ENST00000526191 TTLL11Q8NHH1 800 aa8.32□□□□□ -1.08
COPB1-204ENST00000526191 PTPRN2Q92932 1015 aa8.32□□□□□ -1.08
COPB1-204ENST00000526191 IPO9Q96P70 1041 aaKnown RBP8.32□□□□□ -1.08
COPB1-204ENST00000526191 SRPK1Q96SB4 655 aaKnown RBP8.32□□□□□ -1.08
COPB1-204ENST00000526191 DNAJC7Q99615 494 aa8.32□□□□□ -1.08
COPB1-204ENST00000526191 LNPKQ9C0E8 428 aa8.32□□□□□ -1.08
COPB1-204ENST00000526191 CROTQ9UKG9 612 aa8.32□□□□□ -1.08
COPB1-204ENST00000526191 DSEQ9UL01 958 aa8.32□□□□□ -1.08
COPB1-204ENST00000526191 MRPS23Q9Y3D9 190 aaKnown RBP8.32□□□□□ -1.08
COPB1-204ENST00000526191 PCDHA8Q9Y5H6 950 aa8.32□□□□□ -1.08
COPB1-204ENST00000526191 CC2D2AQ9P2K1 1620 aa8.32□□□□□ -1.08
COPB1-204ENST00000526191 AQP7O14520 342 aa8.31□□□□□ -1.08
COPB1-204ENST00000526191 ZNF28P17035 718 aa8.31□□□□□ -1.08
COPB1-204ENST00000526191 CNR2P34972 360 aa8.31□□□□□ -1.08
COPB1-204ENST00000526191 SKOR2Q2VWA4 1001 aaPredicted RBP8.31□□□□□ -1.08
COPB1-204ENST00000526191 UBXN11Q5T124 520 aa8.31□□□□□ -1.08
COPB1-204ENST00000526191 PHF19Q5T6S3 580 aa8.31□□□□□ -1.08
COPB1-204ENST00000526191 LRP10Q7Z4F1 713 aa8.31□□□□□ -1.08
COPB1-204ENST00000526191 DNAJC2Q99543 621 aaKnown RBP8.31□□□□□ -1.08
COPB1-204ENST00000526191 DHRS4Q9BTZ2 278 aa8.31□□□□□ -1.08
COPB1-204ENST00000526191 KRTAP4-9Q9BYQ8 210 aa8.31□□□□□ -1.08
COPB1-204ENST00000526191 CD244Q9BZW8 370 aa8.31□□□□□ -1.08
COPB1-204ENST00000526191 CECR2Q9BXF3 1484 aa8.31□□□□□ -1.08
COPB1-204ENST00000526191 TCRBV5S4A2TA0A5A2 114 aa8.3□□□□□ -1.08
COPB1-204ENST00000526191 MLLT6P55198 1093 aaPredicted RBP8.3□□□□□ -1.08
COPB1-204ENST00000526191 PAN2Q504Q3 1202 aaKnown RBP8.3□□□□□ -1.08
COPB1-204ENST00000526191 ZFYVE27Q5T4F4 411 aa8.3□□□□□ -1.08
COPB1-204ENST00000526191 PRAMEF18Q5VWM3 479 aa8.3□□□□□ -1.08
COPB1-204ENST00000526191 TXNDC5Q8NBS9 432 aaKnown RBP8.3□□□□□ -1.08
COPB1-204ENST00000526191 SH3RF2Q8TEC5 729 aa8.3□□□□□ -1.08
COPB1-204ENST00000526191 KISS1RQ969F8 398 aaPredicted RBP8.3□□□□□ -1.08
COPB1-204ENST00000526191 CLIC6Q96NY7 704 aa8.3□□□□□ -1.08
COPB1-204ENST00000526191 BDH2Q9BUT1 245 aa8.3□□□□□ -1.08
COPB1-204ENST00000526191 HSPBP1Q9NZL4 362 aa8.3□□□□□ -1.08
COPB1-204ENST00000526191 PCDHA9Q9Y5H5 950 aa8.3□□□□□ -1.08
COPB1-204ENST00000526191 FAHP16930 419 aa8.29□□□□□ -1.08
COPB1-204ENST00000526191 GABREP78334 506 aa8.29□□□□□ -1.08
COPB1-204ENST00000526191 GUCY1A3Q02108 690 aa8.29□□□□□ -1.08
COPB1-204ENST00000526191 PAK1Q13153 545 aa8.29□□□□□ -1.08
COPB1-204ENST00000526191 LONRF2Q1L5Z9 754 aa8.29□□□□□ -1.08
COPB1-204ENST00000526191 FAM26FQ5R3K3 315 aa8.29□□□□□ -1.08
COPB1-204ENST00000526191 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.29□□□□□ -1.08
COPB1-204ENST00000526191 NPM2Q86SE8 214 aaKnown RBP8.29□□□□□ -1.08
COPB1-204ENST00000526191 PCDH19Q8TAB3 1148 aa8.29□□□□□ -1.08
COPB1-204ENST00000526191 ZCCHC14Q8WYQ9 949 aaKnown RBP8.29□□□□□ -1.08
COPB1-204ENST00000526191 TMEM209Q96SK2 561 aa8.29□□□□□ -1.08
COPB1-204ENST00000526191 SRGAP2CP0DJJ0 459 aa8.28□□□□□ -1.08
COPB1-204ENST00000526191 KCTD1Q719H9 257 aa8.28□□□□□ -1.08
COPB1-204ENST00000526191 MKL1Q969V6 931 aa8.28□□□□□ -1.08
COPB1-204ENST00000526191 MROH6A6NGR9 719 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms