RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 UBE2ZQ9H832 354 aaPredicted RBP27.73■■■□□ 2.03
USP47-205ENST00000525257 PNMA6FA0A0J9YX94 578 aa27.72■■■□□ 2.03
USP47-205ENST00000525257 NOP56O00567 594 aaKnown RBP27.72■■■□□ 2.03
USP47-205ENST00000525257 TREHO43280 583 aa27.72■■■□□ 2.03
USP47-205ENST00000525257 CYP21A2P08686 494 aa27.72■■■□□ 2.03
USP47-205ENST00000525257 CTSHP09668 335 aa27.72■■■□□ 2.03
USP47-205ENST00000525257 HOXC8P31273 242 aa27.72■■■□□ 2.03
USP47-205ENST00000525257 PLEKHG4Q58EX7 1191 aa27.72■■■□□ 2.03
USP47-205ENST00000525257 PIBF1Q8WXW3 757 aa27.72■■■□□ 2.03
USP47-205ENST00000525257 FAM122AQ96E09 287 aa27.72■■■□□ 2.03
USP47-205ENST00000525257 ERICH2A1L162 156 aa27.71■■■□□ 2.03
USP47-205ENST00000525257 GSPT1P15170 499 aaKnown RBP27.71■■■□□ 2.03
USP47-205ENST00000525257 MRPS9P82933 396 aaKnown RBP27.71■■■□□ 2.03
USP47-205ENST00000525257 HTRA4P83105 476 aaPredicted RBP27.71■■■□□ 2.03
USP47-205ENST00000525257 GNPTABQ3T906 1256 aa27.71■■■□□ 2.03
USP47-205ENST00000525257 KHSRPQ92945 711 aaKnown RBP eCLIP27.71■■■□□ 2.038e-7■■□□□ 12.3
USP47-205ENST00000525257 LRFN3Q9BTN0 628 aa27.71■■■□□ 2.03
USP47-205ENST00000525257 RNPEPQ9H4A4 650 aa27.71■■■□□ 2.03
USP47-205ENST00000525257 U3KPZ7 1027 aaPredicted RBP27.71■■■□□ 2.03
USP47-205ENST00000525257 PTH1RQ03431 593 aa27.7■■■□□ 2.02
USP47-205ENST00000525257 WTAPQ15007 396 aa27.7■■■□□ 2.02
USP47-205ENST00000525257 CYFIP1Q7L576 1253 aa27.7■■■□□ 2.02
USP47-205ENST00000525257 RALYLQ86SE5 291 aaKnown RBP27.7■■■□□ 2.02
USP47-205ENST00000525257 YTHDC1Q96MU7 727 aaKnown RBP27.7■■■□□ 2.02
USP47-205ENST00000525257 OSBPL7Q9BZF2 842 aa27.7■■■□□ 2.02
USP47-205ENST00000525257 TAF6LQ9Y6J9 622 aa27.7■■■□□ 2.02
USP47-205ENST00000525257 FRMPD4Q14CM0 1322 aa27.69■■■□□ 2.02
USP47-205ENST00000525257 PDE4AP27815 886 aa27.69■■■□□ 2.02
USP47-205ENST00000525257 TROAPQ12815 778 aa27.69■■■□□ 2.02
USP47-205ENST00000525257 TTC22Q5TAA0 569 aa27.69■■■□□ 2.02
USP47-205ENST00000525257 TRIM50Q86XT4 487 aa27.69■■■□□ 2.02
USP47-205ENST00000525257 SP7Q8TDD2 431 aaPredicted RBP27.69■■■□□ 2.02
USP47-205ENST00000525257 SEPT8Q92599 483 aa27.69■■■□□ 2.02
USP47-205ENST00000525257 INPP4AQ96PE3 977 aaPredicted RBP27.69■■■□□ 2.02
USP47-205ENST00000525257 SETD4Q9NVD3 440 aa27.69■■■□□ 2.02
USP47-205ENST00000525257 RTEL1Q9NZ71 1219 aa27.69■■■□□ 2.02
USP47-205ENST00000525257 KCNA5P22460 613 aa27.68■■■□□ 2.02
USP47-205ENST00000525257 ICAM3P32942 547 aa27.68■■■□□ 2.02
USP47-205ENST00000525257 SEMA3FQ13275 785 aa27.68■■■□□ 2.02
USP47-205ENST00000525257 NEDD9Q14511 834 aa27.68■■■□□ 2.02
USP47-205ENST00000525257 TMEM31Q5JXX7 168 aa27.68■■■□□ 2.02
USP47-205ENST00000525257 METTL7BQ6UX53 244 aa27.68■■■□□ 2.02
USP47-205ENST00000525257 USP26Q9BXU7 913 aa27.68■■■□□ 2.02
USP47-205ENST00000525257 CD320Q9NPF0 282 aa27.68■■■□□ 2.02
USP47-205ENST00000525257 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP27.67■■■□□ 2.02
USP47-205ENST00000525257 SPATA31C2B4DYI2 1134 aa27.67■■■□□ 2.02
USP47-205ENST00000525257 E7EWF7 191 aa27.67■■■□□ 2.02
USP47-205ENST00000525257 STAM2O75886 525 aa27.67■■■□□ 2.02
USP47-205ENST00000525257 UPP2O95045 317 aa27.67■■■□□ 2.02
USP47-205ENST00000525257 SART3Q15020 963 aaKnown RBP27.67■■■□□ 2.02
USP47-205ENST00000525257 YME1L1Q96TA2 773 aa27.67■■■□□ 2.02
USP47-205ENST00000525257 GPR20Q99678 358 aa27.67■■■□□ 2.02
USP47-205ENST00000525257 TELO2Q9Y4R8 837 aa27.67■■■□□ 2.02
USP47-205ENST00000525257 FIBPO43427 364 aa27.66■■■□□ 2.02
USP47-205ENST00000525257 CAND2O75155 1236 aa27.66■■■□□ 2.02
USP47-205ENST00000525257 SP4Q02446 784 aa27.66■■■□□ 2.02
USP47-205ENST00000525257 EPC2Q52LR7 807 aa27.66■■■□□ 2.02
USP47-205ENST00000525257 UTP14CQ5TAP6 766 aaKnown RBP27.66■■■□□ 2.02
USP47-205ENST00000525257 CATIPQ7Z7H3 387 aa27.66■■■□□ 2.02
USP47-205ENST00000525257 NCOA7Q8NI08 942 aa27.66■■■□□ 2.02
USP47-205ENST00000525257 RUFY2Q8WXA3 655 aa27.66■■■□□ 2.02
USP47-205ENST00000525257 MRPL38Q96DV4 380 aaKnown RBP27.66■■■□□ 2.02
USP47-205ENST00000525257 FAM86C2PA6NEL3 165 aa27.65■■■□□ 2.02
USP47-205ENST00000525257 GNAT1P11488 350 aa27.65■■■□□ 2.02
USP47-205ENST00000525257 LEXMQ3ZCV2 418 aa27.65■■■□□ 2.02
USP47-205ENST00000525257 GADD45GIP1Q8TAE8 222 aaPredicted RBP27.65■■■□□ 2.02
USP47-205ENST00000525257 TOP1MTQ969P6 601 aa27.65■■■□□ 2.02
USP47-205ENST00000525257 ZNF215Q9UL58 517 aaPredicted RBP27.65■■■□□ 2.02
USP47-205ENST00000525257 NLRC5Q86WI3 1866 aa27.65■■■□□ 2.02
USP47-205ENST00000525257 LOC101059915A0A1B0GWI6 518 aaPredicted RBP27.64■■■□□ 2.02
USP47-205ENST00000525257 CHMLP26374 656 aa27.64■■■□□ 2.02
USP47-205ENST00000525257 ARHGAP4P98171 946 aa27.64■■■□□ 2.02
USP47-205ENST00000525257 SAMD11Q96NU1 681 aa27.64■■■□□ 2.02
USP47-205ENST00000525257 HCN4Q9Y3Q4 1203 aa27.64■■■□□ 2.02
USP47-205ENST00000525257 ANTXR2P58335 489 aa27.63■■■□□ 2.01
USP47-205ENST00000525257 PTPROQ16827 1216 aa27.63■■■□□ 2.01
USP47-205ENST00000525257 USP17L6PQ6QN14 398 aa27.63■■■□□ 2.01
USP47-205ENST00000525257 SMARCC2Q8TAQ2 1214 aa27.63■■■□□ 2.01
USP47-205ENST00000525257 LMBR1Q8WVP7 490 aa27.63■■■□□ 2.01
USP47-205ENST00000525257 IFIH1Q9BYX4 1025 aaKnown RBP27.63■■■□□ 2.01
USP47-205ENST00000525257 C11orf16Q9NQ32 467 aa27.63■■■□□ 2.01
USP47-205ENST00000525257 IL9P15248 144 aa27.62■■■□□ 2.01
USP47-205ENST00000525257 GPM6BQ13491 265 aa27.62■■■□□ 2.01
USP47-205ENST00000525257 CUL5Q93034 780 aa27.62■■■□□ 2.01
USP47-205ENST00000525257 MYL10Q9BUA6 226 aa27.62■■■□□ 2.01
USP47-205ENST00000525257 SUPT16HQ9Y5B9 1047 aaKnown RBP27.62■■■□□ 2.01
USP47-205ENST00000525257 COL4A6Q14031 1691 aa27.62■■■□□ 2.01
USP47-205ENST00000525257 ADAM17P78536 824 aa27.61■■■□□ 2.01
USP47-205ENST00000525257 TIGD5Q53EQ6 642 aa27.61■■■□□ 2.01
USP47-205ENST00000525257 PCNX4Q63HM2 1172 aa27.61■■■□□ 2.01
USP47-205ENST00000525257 PTCRAQ6ISU1 281 aaPredicted RBP27.61■■■□□ 2.01
USP47-205ENST00000525257 FAM178BQ8IXR5 827 aa27.61■■■□□ 2.01
USP47-205ENST00000525257 TMEM192Q8IY95 271 aa27.61■■■□□ 2.01
USP47-205ENST00000525257 IGDCC4Q8TDY8 1250 aa27.61■■■□□ 2.01
USP47-205ENST00000525257 APBB2Q92870 758 aa27.61■■■□□ 2.01
USP47-205ENST00000525257 RRP36Q96EU6 259 aaKnown RBP27.61■■■□□ 2.01
USP47-205ENST00000525257 PI4K2BG5E9Z4 385 aa27.6■■■□□ 2.01
USP47-205ENST00000525257 H3BNC9 293 aa27.6■■■□□ 2.01
USP47-205ENST00000525257 GPR37L1O60883 481 aa27.6■■■□□ 2.01
USP47-205ENST00000525257 MB21D2Q8IYB1 491 aaPredicted RBP27.6■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms