RNA–Protein interactions for RNA: ENST00000525141.1

SMCO4-202, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMCO4, Length 889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-202ENST00000525141 ADAMTS3O15072 1205 aa14.41□□□□□ -0.1
SMCO4-202ENST00000525141 NBNO60934 754 aa14.41□□□□□ -0.1
SMCO4-202ENST00000525141 STAM2O75886 525 aa14.41□□□□□ -0.1
SMCO4-202ENST00000525141 CKBP12277 381 aa14.41□□□□□ -0.1
SMCO4-202ENST00000525141 HOXC8P31273 242 aa14.41□□□□□ -0.1
SMCO4-202ENST00000525141 ADD1P35611 737 aaKnown RBP14.41□□□□□ -0.1
SMCO4-202ENST00000525141 RBL2Q08999 1139 aa14.41□□□□□ -0.1
SMCO4-202ENST00000525141 BFSP2Q13515 415 aa14.41□□□□□ -0.1
SMCO4-202ENST00000525141 WWC2Q6AWC2 1192 aa14.41□□□□□ -0.1
SMCO4-202ENST00000525141 RUFY3Q7L099 469 aa14.41□□□□□ -0.1
SMCO4-202ENST00000525141 C7orf31Q8N865 590 aa14.41□□□□□ -0.1
SMCO4-202ENST00000525141 AGXT2Q9BYV1 514 aa14.41□□□□□ -0.1
SMCO4-202ENST00000525141 OSBPL7Q9BZF2 842 aa14.41□□□□□ -0.1
SMCO4-202ENST00000525141 NKX2-4Q9H2Z4 354 aa14.41□□□□□ -0.1
SMCO4-202ENST00000525141 RNPEPQ9H4A4 650 aa14.41□□□□□ -0.1
SMCO4-202ENST00000525141 SEC63Q9UGP8 760 aaKnown RBP14.41□□□□□ -0.1
SMCO4-202ENST00000525141 PCDHA6Q9UN73 950 aa14.41□□□□□ -0.1
SMCO4-202ENST00000525141 PCDHA8Q9Y5H6 950 aa14.41□□□□□ -0.1
SMCO4-202ENST00000525141 UBIAD1Q9Y5Z9 338 aa14.41□□□□□ -0.1
SMCO4-202ENST00000525141 SLC4A7Q9Y6M7 1214 aa14.41□□□□□ -0.1
SMCO4-202ENST00000525141 GBF1Q92538 1859 aa14.41□□□□□ -0.1
SMCO4-202ENST00000525141 H3BRB1 525 aa14.4□□□□□ -0.1
SMCO4-202ENST00000525141 ZBTB43O43298 467 aa14.4□□□□□ -0.1
SMCO4-202ENST00000525141 FIBPO43427 364 aa14.4□□□□□ -0.1
SMCO4-202ENST00000525141 LGALS2P05162 132 aa14.4□□□□□ -0.1
SMCO4-202ENST00000525141 RFC2P35250 354 aa14.4□□□□□ -0.1
SMCO4-202ENST00000525141 PTK7Q13308 1070 aa14.4□□□□□ -0.1
SMCO4-202ENST00000525141 ADGRE1Q14246 886 aa14.4□□□□□ -0.1
SMCO4-202ENST00000525141 NEDD9Q14511 834 aa14.4□□□□□ -0.1
SMCO4-202ENST00000525141 MBTPS1Q14703 1052 aa14.4□□□□□ -0.1
SMCO4-202ENST00000525141 XRRA1Q6P2D8 792 aa14.4□□□□□ -0.1
SMCO4-202ENST00000525141 METTL7BQ6UX53 244 aa14.4□□□□□ -0.1
SMCO4-202ENST00000525141 SYNE3Q6ZMZ3 975 aa14.4□□□□□ -0.1
SMCO4-202ENST00000525141 CYP2W1Q8TAV3 490 aa14.4□□□□□ -0.1
SMCO4-202ENST00000525141 CUL5Q93034 780 aa14.4□□□□□ -0.1
SMCO4-202ENST00000525141 SENP7Q9BQF6 1050 aa14.4□□□□□ -0.1
SMCO4-202ENST00000525141 TUT1Q9H6E5 874 aaKnown RBP14.4□□□□□ -0.1
SMCO4-202ENST00000525141 CYP46A1Q9Y6A2 500 aa14.4□□□□□ -0.1
SMCO4-202ENST00000525141 PRUNE2Q8WUY3 3088 aa14.4□□□□□ -0.1
SMCO4-202ENST00000525141 CNTNAP5Q8WYK1 1306 aa14.4□□□□□ -0.1
SMCO4-202ENST00000525141 EYSQ5T1H1 3165 aa14.39□□□□□ -0.11
SMCO4-202ENST00000525141 CHD7Q9P2D1 2997 aa14.39□□□□□ -0.11
SMCO4-202ENST00000525141 KLF18A0A0U1RQI7 1052 aa14.39□□□□□ -0.11
SMCO4-202ENST00000525141 GSTTP1A0A1W2PQM5 241 aa14.39□□□□□ -0.11
SMCO4-202ENST00000525141 CXCL10P02778 98 aa14.39□□□□□ -0.11
SMCO4-202ENST00000525141 PFKMP08237 780 aa14.39□□□□□ -0.11
SMCO4-202ENST00000525141 SELPP16109 830 aa14.39□□□□□ -0.11
SMCO4-202ENST00000525141 KCNA2P16389 499 aa14.39□□□□□ -0.11
SMCO4-202ENST00000525141 RCAN1P53805 252 aa14.39□□□□□ -0.11
SMCO4-202ENST00000525141 ADAM17P78536 824 aa14.39□□□□□ -0.11
SMCO4-202ENST00000525141 FGD1P98174 961 aa14.39□□□□□ -0.11
SMCO4-202ENST00000525141 APOBRQ0VD83 1088 aa14.39□□□□□ -0.11
SMCO4-202ENST00000525141 RTN1Q16799 776 aa14.39□□□□□ -0.11
SMCO4-202ENST00000525141 ZNF618Q5T7W0 954 aa14.39□□□□□ -0.11
SMCO4-202ENST00000525141 Q6ZUG5 572 aa14.39□□□□□ -0.11
SMCO4-202ENST00000525141 CAGE1Q8TC20 777 aa14.39□□□□□ -0.11
SMCO4-202ENST00000525141 AFAP1L1Q8TED9 768 aa14.39□□□□□ -0.11
SMCO4-202ENST00000525141 KATNAL1Q9BW62 490 aa14.39□□□□□ -0.11
SMCO4-202ENST00000525141 PRDM12Q9H4Q4 367 aa14.39□□□□□ -0.11
SMCO4-202ENST00000525141 RBM28Q9NW13 759 aaKnown RBP14.39□□□□□ -0.11
SMCO4-202ENST00000525141 NOD1Q9Y239 953 aa14.39□□□□□ -0.11
SMCO4-202ENST00000525141 ZBBXA8MT70 800 aa14.38□□□□□ -0.11
SMCO4-202ENST00000525141 STXBP3O00186 592 aa14.38□□□□□ -0.11
SMCO4-202ENST00000525141 DLL1O00548 723 aa14.38□□□□□ -0.11
SMCO4-202ENST00000525141 TREHO43280 583 aa14.38□□□□□ -0.11
SMCO4-202ENST00000525141 ARHGEF15O94989 841 aa14.38□□□□□ -0.11
SMCO4-202ENST00000525141 SMIM10L2AP0DMW4 78 aa14.38□□□□□ -0.11
SMCO4-202ENST00000525141 SMIM10L2BP0DMW5 78 aa14.38□□□□□ -0.11
SMCO4-202ENST00000525141 ATP2A2P16615 1042 aaKnown RBP14.38□□□□□ -0.11
SMCO4-202ENST00000525141 EVCP57679 992 aa14.38□□□□□ -0.11
SMCO4-202ENST00000525141 GNPTABQ3T906 1256 aa14.38□□□□□ -0.11
SMCO4-202ENST00000525141 LRRC8DQ7L1W4 858 aa14.38□□□□□ -0.11
SMCO4-202ENST00000525141 HEATR3Q7Z4Q2 680 aa14.38□□□□□ -0.11
SMCO4-202ENST00000525141 SERINC5Q86VE9 423 aa14.38□□□□□ -0.11
SMCO4-202ENST00000525141 USP38Q8NB14 1042 aa14.38□□□□□ -0.11
SMCO4-202ENST00000525141 MAFAQ8NHW3 353 aaPredicted RBP14.38□□□□□ -0.11
SMCO4-202ENST00000525141 FTOQ9C0B1 505 aaKnown RBP eCLIP14.38□□□□□ -0.11
SMCO4-202ENST00000525141 RIC8AQ9NPQ8 531 aa14.38□□□□□ -0.11
SMCO4-202ENST00000525141 JADE2Q9NQC1 790 aa14.38□□□□□ -0.11
SMCO4-202ENST00000525141 TMEM260Q9NX78 707 aa14.38□□□□□ -0.11
SMCO4-202ENST00000525141 MSRAQ9UJ68 235 aa14.38□□□□□ -0.11
SMCO4-202ENST00000525141 PCDHA11Q9Y5I1 949 aa14.38□□□□□ -0.11
SMCO4-202ENST00000525141 FOSL2P15408 326 aa14.37□□□□□ -0.11
SMCO4-202ENST00000525141 CLK2P49760 499 aaKnown RBP14.37□□□□□ -0.11
SMCO4-202ENST00000525141 FXR2P51116 673 aaKnown RBP eCLIP14.37□□□□□ -0.11
SMCO4-202ENST00000525141 RAB30Q15771 203 aa14.37□□□□□ -0.11
SMCO4-202ENST00000525141 PKN1Q16512 942 aa14.37□□□□□ -0.11
SMCO4-202ENST00000525141 TMCO2Q7Z6W1 182 aaPredicted RBP14.37□□□□□ -0.11
SMCO4-202ENST00000525141 NLRX1Q86UT6 975 aa14.37□□□□□ -0.11
SMCO4-202ENST00000525141 TRIM50Q86XT4 487 aa14.37□□□□□ -0.11
SMCO4-202ENST00000525141 PHOSPHO2Q8TCD6 241 aa14.37□□□□□ -0.11
SMCO4-202ENST00000525141 SP7Q8TDD2 431 aaPredicted RBP14.37□□□□□ -0.11
SMCO4-202ENST00000525141 GPRASP2Q96D09 838 aa14.37□□□□□ -0.11
SMCO4-202ENST00000525141 PGBD1Q96JS3 809 aa14.37□□□□□ -0.11
SMCO4-202ENST00000525141 MTIF3Q9H2K0 278 aaKnown RBP14.37□□□□□ -0.11
SMCO4-202ENST00000525141 SETD4Q9NVD3 440 aa14.37□□□□□ -0.11
SMCO4-202ENST00000525141 UNC80Q8N2C7 3258 aa14.37□□□□□ -0.11
SMCO4-202ENST00000525141 C17orf102A2RUQ5 167 aa14.36□□□□□ -0.11
SMCO4-202ENST00000525141 SMCO2A6NFE2 343 aa14.36□□□□□ -0.11
SMCO4-202ENST00000525141 GOLGA8AA7E2F4 631 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms