RNA–Protein interactions for RNA: ENST00000524646.1

PKP3-202, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 312 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-202ENST00000524646 EIF6P56537 245 aaKnown RBP9.85□□□□□ -0.83
PKP3-202ENST00000524646 GTF2IP78347 998 aa9.85□□□□□ -0.83
PKP3-202ENST00000524646 ATP2B2Q01814 1243 aa9.85□□□□□ -0.83
PKP3-202ENST00000524646 KCNMA1Q12791 1236 aa9.85□□□□□ -0.83
PKP3-202ENST00000524646 AP3B2Q13367 1082 aa9.85□□□□□ -0.83
PKP3-202ENST00000524646 NNTQ13423 1086 aa9.85□□□□□ -0.83
PKP3-202ENST00000524646 SF3B2Q13435 895 aaKnown RBP9.85□□□□□ -0.83
PKP3-202ENST00000524646 LRRC41Q15345 812 aa9.85□□□□□ -0.83
PKP3-202ENST00000524646 ECM1Q16610 540 aa9.85□□□□□ -0.83
PKP3-202ENST00000524646 SLC9C1Q4G0N8 1177 aa9.85□□□□□ -0.83
PKP3-202ENST00000524646 CCDC181Q5TID7 509 aa9.85□□□□□ -0.83
PKP3-202ENST00000524646 NFRKBQ6P4R8 1299 aa9.85□□□□□ -0.83
PKP3-202ENST00000524646 EMBQ6PCB8 327 aa9.85□□□□□ -0.83
PKP3-202ENST00000524646 GPBP1Q86WP2 473 aa9.85□□□□□ -0.83
PKP3-202ENST00000524646 SPATA4Q8NEY3 305 aa9.85□□□□□ -0.83
PKP3-202ENST00000524646 DCAF4Q8WV16 495 aa9.85□□□□□ -0.83
PKP3-202ENST00000524646 ANO3Q9BYT9 981 aa9.85□□□□□ -0.83
PKP3-202ENST00000524646 GANQ9H2C0 597 aa9.85□□□□□ -0.83
PKP3-202ENST00000524646 KCNMB3Q9NPA1 279 aa9.85□□□□□ -0.83
PKP3-202ENST00000524646 DDX4Q9NQI0 724 aaKnown RBP9.85□□□□□ -0.83
PKP3-202ENST00000524646 BMP2KQ9NSY1 1161 aaPredicted RBP9.85□□□□□ -0.83
PKP3-202ENST00000524646 ATP6V0A2Q9Y487 856 aa9.85□□□□□ -0.83
PKP3-202ENST00000524646 COL2A1P02458 1487 aaPredicted RBP9.85□□□□□ -0.83
PKP3-202ENST00000524646 PITPNM2Q9BZ72 1349 aa9.84□□□□□ -0.83
PKP3-202ENST00000524646 POTEB3A0JP26 581 aa9.84□□□□□ -0.83
PKP3-202ENST00000524646 GRID2IPA4D2P6 1211 aa9.84□□□□□ -0.83
PKP3-202ENST00000524646 GOLGA6BA6NDN3 693 aa9.84□□□□□ -0.83
PKP3-202ENST00000524646 POTECB2RU33 542 aa9.84□□□□□ -0.83
PKP3-202ENST00000524646 USP17L10C9JJH3 530 aa9.84□□□□□ -0.83
PKP3-202ENST00000524646 TRAF5O00463 557 aa9.84□□□□□ -0.83
PKP3-202ENST00000524646 NCK2O43639 380 aa9.84□□□□□ -0.83
PKP3-202ENST00000524646 TOM1O60784 492 aa9.84□□□□□ -0.83
PKP3-202ENST00000524646 NOL4O94818 638 aa9.84□□□□□ -0.83
PKP3-202ENST00000524646 SSBP05455 408 aaKnown RBP eCLIP9.84□□□□□ -0.83
PKP3-202ENST00000524646 PLA2G4BP0C869 781 aa9.84□□□□□ -0.83
PKP3-202ENST00000524646 PAFAH1B1P43034 410 aa9.84□□□□□ -0.83
PKP3-202ENST00000524646 IRX5P78411 483 aaPredicted RBP9.84□□□□□ -0.83
PKP3-202ENST00000524646 GFPT1Q06210 699 aaPredicted RBP9.84□□□□□ -0.83
PKP3-202ENST00000524646 DDR1Q08345 913 aa9.84□□□□□ -0.83
PKP3-202ENST00000524646 ASIC2Q16515 512 aa9.84□□□□□ -0.83
PKP3-202ENST00000524646 EDRF1Q3B7T1 1238 aa9.84□□□□□ -0.83
PKP3-202ENST00000524646 MCTP2Q6DN12 878 aa9.84□□□□□ -0.83
PKP3-202ENST00000524646 TTBK2Q6IQ55 1244 aa9.84□□□□□ -0.83
PKP3-202ENST00000524646 C8orf74Q6P047 294 aa9.84□□□□□ -0.83
PKP3-202ENST00000524646 POTEBQ6S5H4 581 aa9.84□□□□□ -0.83
PKP3-202ENST00000524646 SND1Q7KZF4 910 aaKnown RBP eCLIP9.84□□□□□ -0.83
PKP3-202ENST00000524646 CERS5Q8N5B7 392 aa9.84□□□□□ -0.83
PKP3-202ENST00000524646 CAVIN3Q969G5 261 aa9.84□□□□□ -0.83
PKP3-202ENST00000524646 CCDC17Q96LX7 622 aa9.84□□□□□ -0.83
PKP3-202ENST00000524646 TLR10Q9BXR5 811 aa9.84□□□□□ -0.83
PKP3-202ENST00000524646 KCTD10Q9H3F6 313 aa9.84□□□□□ -0.83
PKP3-202ENST00000524646 STIM2Q9P246 746 aa9.84□□□□□ -0.83
PKP3-202ENST00000524646 RNF14Q9UBS8 474 aa9.84□□□□□ -0.83
PKP3-202ENST00000524646 USP21Q9UK80 565 aa9.84□□□□□ -0.83
PKP3-202ENST00000524646 PCDHA2Q9Y5H9 948 aa9.84□□□□□ -0.83
PKP3-202ENST00000524646 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.84□□□□□ -0.83
PKP3-202ENST00000524646 SPATA31A6Q5VVP1 1343 aa9.83□□□□□ -0.84
PKP3-202ENST00000524646 CYP3A7-CYP3A51PA0A087WV96 503 aa9.83□□□□□ -0.84
PKP3-202ENST00000524646 KLRG2A4D1S0 409 aaPredicted RBP9.83□□□□□ -0.84
PKP3-202ENST00000524646 GOLGA8KD6RF30 607 aa9.83□□□□□ -0.84
PKP3-202ENST00000524646 POLRMTO00411 1230 aaKnown RBP9.83□□□□□ -0.84
PKP3-202ENST00000524646 TLR2O60603 784 aa9.83□□□□□ -0.84
PKP3-202ENST00000524646 SHOX2O60902 331 aaPredicted RBP9.83□□□□□ -0.84
PKP3-202ENST00000524646 PHACTR2O75167 634 aa9.83□□□□□ -0.84
PKP3-202ENST00000524646 ZMYND10O75800 440 aa9.83□□□□□ -0.84
PKP3-202ENST00000524646 CYP11B2P19099 503 aa9.83□□□□□ -0.84
PKP3-202ENST00000524646 CYP3A7P24462 503 aa9.83□□□□□ -0.84
PKP3-202ENST00000524646 POLR2FP61218 127 aaKnown RBP9.83□□□□□ -0.84
PKP3-202ENST00000524646 SLC20A2Q08357 652 aa9.83□□□□□ -0.84
PKP3-202ENST00000524646 RAPGEF1Q13905 1077 aa9.83□□□□□ -0.84
PKP3-202ENST00000524646 EZH2Q15910 746 aaKnown RBP9.83□□□□□ -0.84
PKP3-202ENST00000524646 CDC37Q16543 378 aaPredicted RBP9.83□□□□□ -0.84
PKP3-202ENST00000524646 QRICH1Q2TAL8 776 aa9.83□□□□□ -0.84
PKP3-202ENST00000524646 GLE1Q53GS7 698 aaKnown RBP9.83□□□□□ -0.84
PKP3-202ENST00000524646 FAM83BQ5T0W9 1011 aa9.83□□□□□ -0.84
PKP3-202ENST00000524646 KLHDC7AQ5VTJ3 777 aa9.83□□□□□ -0.84
PKP3-202ENST00000524646 SRLQ86TD4 932 aa9.83□□□□□ -0.84
PKP3-202ENST00000524646 SP8Q8IXZ3 490 aa9.83□□□□□ -0.84
PKP3-202ENST00000524646 SLFN12Q8IYM2 578 aa9.83□□□□□ -0.84
PKP3-202ENST00000524646 ERMNQ8TAM6 284 aa9.83□□□□□ -0.84
PKP3-202ENST00000524646 FAM76AQ8TAV0 307 aa9.83□□□□□ -0.84
PKP3-202ENST00000524646 FGFBP2Q9BYJ0 223 aa9.83□□□□□ -0.84
PKP3-202ENST00000524646 DHX36Q9H2U1 1008 aaKnown RBP9.83□□□□□ -0.84
PKP3-202ENST00000524646 PSTPIP2Q9H939 334 aa9.83□□□□□ -0.84
PKP3-202ENST00000524646 NLRC4Q9NPP4 1024 aa9.83□□□□□ -0.84
PKP3-202ENST00000524646 USP40Q9NVE5 1235 aa9.83□□□□□ -0.84
PKP3-202ENST00000524646 SALL4Q9UJQ4 1053 aa9.83□□□□□ -0.84
PKP3-202ENST00000524646 PCDHA12Q9UN75 941 aa9.83□□□□□ -0.84
PKP3-202ENST00000524646 RRP15Q9Y3B9 282 aaKnown RBP9.83□□□□□ -0.84
PKP3-202ENST00000524646 PCDHGC5Q9Y5F6 944 aa9.83□□□□□ -0.84
PKP3-202ENST00000524646 STK24Q9Y6E0 443 aa9.83□□□□□ -0.84
PKP3-202ENST00000524646 GOLGA6CA6NDK9 693 aa9.82□□□□□ -0.84
PKP3-202ENST00000524646 BTNL10A8MVZ5 291 aa9.82□□□□□ -0.84
PKP3-202ENST00000524646 E9PMD0 336 aa9.82□□□□□ -0.84
PKP3-202ENST00000524646 AGPSO00116 658 aa9.82□□□□□ -0.84
PKP3-202ENST00000524646 MPHOSPH10O00566 681 aaKnown RBP9.82□□□□□ -0.84
PKP3-202ENST00000524646 TBX3O15119 743 aa9.82□□□□□ -0.84
PKP3-202ENST00000524646 OPA1O60313 960 aa9.82□□□□□ -0.84
PKP3-202ENST00000524646 KRT18P05783 430 aaKnown RBP9.82□□□□□ -0.84
PKP3-202ENST00000524646 GOLGA6DP0CG33 693 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms