RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 SLC35G1Q2M3R5 365 aa30.05■■■□□ 2.4
PVT1-219ENST00000523427 PLEKHG4Q58EX7 1191 aa30.05■■■□□ 2.4
PVT1-219ENST00000523427 SEPT8Q92599 483 aa30.05■■■□□ 2.4
PVT1-219ENST00000523427 YME1L1Q96TA2 773 aa30.05■■■□□ 2.4
PVT1-219ENST00000523427 OSBPL7Q9BZF2 842 aa30.05■■■□□ 2.4
PVT1-219ENST00000523427 RNPEPQ9H4A4 650 aa30.05■■■□□ 2.4
PVT1-219ENST00000523427 PALM3A6NDB9 673 aaPredicted RBP30.04■■■□□ 2.4
PVT1-219ENST00000523427 LGALS2P05162 132 aa30.04■■■□□ 2.4
PVT1-219ENST00000523427 TGFB3P10600 412 aa30.04■■■□□ 2.4
PVT1-219ENST00000523427 LEXMQ3ZCV2 418 aa30.04■■■□□ 2.4
PVT1-219ENST00000523427 EPC2Q52LR7 807 aa30.04■■■□□ 2.4
PVT1-219ENST00000523427 GJD3Q8N144 294 aa30.04■■■□□ 2.4
PVT1-219ENST00000523427 IL25Q9H293 177 aa30.04■■■□□ 2.4
PVT1-219ENST00000523427 GPR37L1O60883 481 aa30.03■■■□□ 2.4
PVT1-219ENST00000523427 HTRA4P83105 476 aaPredicted RBP30.03■■■□□ 2.4
PVT1-219ENST00000523427 PTCRAQ6ISU1 281 aaPredicted RBP30.03■■■□□ 2.4
PVT1-219ENST00000523427 SETD4Q9NVD3 440 aa30.03■■■□□ 2.4
PVT1-219ENST00000523427 RTEL1Q9NZ71 1219 aa30.03■■■□□ 2.4
PVT1-219ENST00000523427 SIP14410 1827 aa30.03■■■□□ 2.4
PVT1-219ENST00000523427 PI4K2BG5E9Z4 385 aa30.02■■■□□ 2.4
PVT1-219ENST00000523427 H3BQ06 376 aaPredicted RBP30.02■■■□□ 2.4
PVT1-219ENST00000523427 PTPROQ16827 1216 aa30.02■■■□□ 2.4
PVT1-219ENST00000523427 UTP14CQ5TAP6 766 aaKnown RBP30.02■■■□□ 2.4
PVT1-219ENST00000523427 CYFIP1Q7L576 1253 aa30.02■■■□□ 2.4
PVT1-219ENST00000523427 FAM178BQ8IXR5 827 aa30.02■■■□□ 2.4
PVT1-219ENST00000523427 MRPL38Q96DV4 380 aaKnown RBP30.02■■■□□ 2.4
PVT1-219ENST00000523427 BAZ2BQ9UIF8 2168 aaKnown RBP30.01■■■□□ 2.4
PVT1-219ENST00000523427 SP4Q02446 784 aa30.01■■■□□ 2.39
PVT1-219ENST00000523427 TRDNQ13061 729 aa30.01■■■□□ 2.39
PVT1-219ENST00000523427 MKRN4PQ13434 485 aaPredicted RBP30.01■■■□□ 2.39
PVT1-219ENST00000523427 GPM6BQ13491 265 aa30.01■■■□□ 2.39
PVT1-219ENST00000523427 GRM4Q14833 912 aa30.01■■■□□ 2.39
PVT1-219ENST00000523427 SENP2Q9HC62 589 aa30.01■■■□□ 2.39
PVT1-219ENST00000523427 IFIT3O14879 490 aaKnown RBP30■■■□□ 2.39
PVT1-219ENST00000523427 GNPTABQ3T906 1256 aa30■■■□□ 2.39
PVT1-219ENST00000523427 TRIM50Q86XT4 487 aa30■■■□□ 2.39
PVT1-219ENST00000523427 SAMD3Q8N6K7 520 aa30■■■□□ 2.39
PVT1-219ENST00000523427 SP7Q8TDD2 431 aaPredicted RBP30■■■□□ 2.39
PVT1-219ENST00000523427 HOXD11P31277 338 aaPredicted RBP29.99■■■□□ 2.39
PVT1-219ENST00000523427 TRAF1Q13077 416 aa29.99■■■□□ 2.39
PVT1-219ENST00000523427 BANK1Q8NDB2 785 aa29.99■■■□□ 2.39
PVT1-219ENST00000523427 TOP1MTQ969P6 601 aa29.99■■■□□ 2.39
PVT1-219ENST00000523427 UIMC1Q96RL1 719 aa29.99■■■□□ 2.39
PVT1-219ENST00000523427 IFIH1Q9BYX4 1025 aaKnown RBP29.99■■■□□ 2.39
PVT1-219ENST00000523427 RIOX1Q9H6W3 641 aa29.99■■■□□ 2.39
PVT1-219ENST00000523427 TELO2Q9Y4R8 837 aa29.99■■■□□ 2.39
PVT1-219ENST00000523427 MICAL3Q7RTP6 2002 aa29.98■■■□□ 2.39
PVT1-219ENST00000523427 CYTH3O43739 400 aa29.98■■■□□ 2.39
PVT1-219ENST00000523427 MRPS9P82933 396 aaKnown RBP29.98■■■□□ 2.39
PVT1-219ENST00000523427 TMEM192Q8IY95 271 aa29.98■■■□□ 2.39
PVT1-219ENST00000523427 USP26Q9BXU7 913 aa29.98■■■□□ 2.39
PVT1-219ENST00000523427 PNMA6FA0A0J9YX94 578 aa29.97■■■□□ 2.39
PVT1-219ENST00000523427 LOC101059915A0A1B0GWI6 518 aaPredicted RBP29.97■■■□□ 2.39
PVT1-219ENST00000523427 ERICH2A1L162 156 aa29.97■■■□□ 2.39
PVT1-219ENST00000523427 ARHGAP4P98171 946 aa29.97■■■□□ 2.39
PVT1-219ENST00000523427 NEDD9Q14511 834 aa29.97■■■□□ 2.39
PVT1-219ENST00000523427 TCEAL5Q5H9L2 206 aa29.97■■■□□ 2.39
PVT1-219ENST00000523427 SAMD11Q96NU1 681 aa29.97■■■□□ 2.39
PVT1-219ENST00000523427 SUPT16HQ9Y5B9 1047 aaKnown RBP29.97■■■□□ 2.39
PVT1-219ENST00000523427 GRXCR2A6NFK2 248 aa29.96■■■□□ 2.39
PVT1-219ENST00000523427 H3BNC9 293 aa29.96■■■□□ 2.39
PVT1-219ENST00000523427 GNAT1P11488 350 aa29.96■■■□□ 2.39
PVT1-219ENST00000523427 HOXC8P31273 242 aa29.96■■■□□ 2.39
PVT1-219ENST00000523427 TIGD5Q53EQ6 642 aa29.96■■■□□ 2.39
PVT1-219ENST00000523427 METTL7BQ6UX53 244 aa29.96■■■□□ 2.39
PVT1-219ENST00000523427 GPR20Q99678 358 aa29.96■■■□□ 2.39
PVT1-219ENST00000523427 SPATA31C2B4DYI2 1134 aa29.95■■■□□ 2.39
PVT1-219ENST00000523427 SEMA3FQ13275 785 aa29.95■■■□□ 2.39
PVT1-219ENST00000523427 WTAPQ15007 396 aa29.95■■■□□ 2.39
PVT1-219ENST00000523427 ARIH1Q9Y4X5 557 aaPredicted RBP29.95■■■□□ 2.39
PVT1-219ENST00000523427 CSPG5O95196 566 aa29.94■■■□□ 2.38
PVT1-219ENST00000523427 AAMPQ13685 434 aa29.94■■■□□ 2.38
PVT1-219ENST00000523427 INPP4AQ96PE3 977 aaPredicted RBP29.94■■■□□ 2.38
PVT1-219ENST00000523427 ZNF215Q9UL58 517 aaPredicted RBP29.94■■■□□ 2.38
PVT1-219ENST00000523427 FIBPO43427 364 aa29.93■■■□□ 2.38
PVT1-219ENST00000523427 CAND2O75155 1236 aa29.93■■■□□ 2.38
PVT1-219ENST00000523427 CYP21A2P08686 494 aa29.93■■■□□ 2.38
PVT1-219ENST00000523427 ICAM3P32942 547 aa29.93■■■□□ 2.38
PVT1-219ENST00000523427 RALYLQ86SE5 291 aaKnown RBP29.93■■■□□ 2.38
PVT1-219ENST00000523427 EXOC6Q8TAG9 804 aa29.93■■■□□ 2.38
PVT1-219ENST00000523427 SMARCC2Q8TAQ2 1214 aa29.93■■■□□ 2.38
PVT1-219ENST00000523427 NEK9Q8TD19 979 aa29.93■■■□□ 2.38
PVT1-219ENST00000523427 LMBR1Q8WVP7 490 aa29.93■■■□□ 2.38
PVT1-219ENST00000523427 CLDND1Q9NY35 253 aa29.93■■■□□ 2.38
PVT1-219ENST00000523427 MYO7AQ13402 2215 aa29.93■■■□□ 2.38
PVT1-219ENST00000523427 CTNNB1P35222 781 aa29.92■■■□□ 2.38
PVT1-219ENST00000523427 PTH1RQ03431 593 aa29.92■■■□□ 2.38
PVT1-219ENST00000523427 USP17L6PQ6QN14 398 aa29.92■■■□□ 2.38
PVT1-219ENST00000523427 IL17RAQ96F46 866 aa29.92■■■□□ 2.38
PVT1-219ENST00000523427 TAF6LQ9Y6J9 622 aa29.92■■■□□ 2.38
PVT1-219ENST00000523427 U3KPZ7 1027 aaPredicted RBP29.92■■■□□ 2.38
PVT1-219ENST00000523427 MUC6Q6W4X9 2439 aa29.92■■■□□ 2.38
PVT1-219ENST00000523427 GHRP10912 638 aa29.91■■■□□ 2.38
PVT1-219ENST00000523427 TROAPQ12815 778 aa29.91■■■□□ 2.38
PVT1-219ENST00000523427 CSPP1Q1MSJ5 1256 aa29.91■■■□□ 2.38
PVT1-219ENST00000523427 PUS10Q3MIT2 529 aaKnown RBP29.91■■■□□ 2.38
PVT1-219ENST00000523427 CATIPQ7Z7H3 387 aa29.91■■■□□ 2.38
PVT1-219ENST00000523427 FIBCD1Q8N539 461 aa29.91■■■□□ 2.38
PVT1-219ENST00000523427 NSUN3Q9H649 340 aaKnown RBP29.91■■■□□ 2.38
PVT1-219ENST00000523427 STAM2O75886 525 aa29.9■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms