RNA–Protein interactions for RNA: ENST00000520003.5

CSGALNACT1-208, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 4

Gene CSGALNACT1, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-208ENST00000520003 SAMD11Q96NU1 681 aa18.22■□□□□ 0.51
CSGALNACT1-208ENST00000520003 MAD2L2Q9UI95 211 aa18.22■□□□□ 0.51
CSGALNACT1-208ENST00000520003 MUC6Q6W4X9 2439 aa18.21■□□□□ 0.51
CSGALNACT1-208ENST00000520003 PALM3A6NDB9 673 aaPredicted RBP18.21■□□□□ 0.51
CSGALNACT1-208ENST00000520003 THPOP40225 353 aa18.21■□□□□ 0.51
CSGALNACT1-208ENST00000520003 PUS10Q3MIT2 529 aaKnown RBP18.21■□□□□ 0.51
CSGALNACT1-208ENST00000520003 TTC22Q5TAA0 569 aa18.21■□□□□ 0.51
CSGALNACT1-208ENST00000520003 TOP1MTQ969P6 601 aa18.21■□□□□ 0.51
CSGALNACT1-208ENST00000520003 OSBPL7Q9BZF2 842 aa18.21■□□□□ 0.51
CSGALNACT1-208ENST00000520003 MICAL3Q7RTP6 2002 aa18.21■□□□□ 0.51
CSGALNACT1-208ENST00000520003 KLRF2D3W0D1 207 aa18.2■□□□□ 0.5
CSGALNACT1-208ENST00000520003 H3BNC9 293 aa18.2■□□□□ 0.5
CSGALNACT1-208ENST00000520003 ZBTB5O15062 677 aa18.2■□□□□ 0.5
CSGALNACT1-208ENST00000520003 CAND2O75155 1236 aa18.2■□□□□ 0.5
CSGALNACT1-208ENST00000520003 MYCLP12524 364 aaPredicted RBP18.2■□□□□ 0.5
CSGALNACT1-208ENST00000520003 TIGD5Q53EQ6 642 aa18.2■□□□□ 0.5
CSGALNACT1-208ENST00000520003 GPKOWQ92917 476 aaPredicted RBP eCLIP18.2■□□□□ 0.5
CSGALNACT1-208ENST00000520003 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.19■□□□□ 0.5
CSGALNACT1-208ENST00000520003 C17orf102A2RUQ5 167 aa18.19■□□□□ 0.5
CSGALNACT1-208ENST00000520003 H3BRB1 525 aa18.19■□□□□ 0.5
CSGALNACT1-208ENST00000520003 SORBS3O60504 671 aa18.19■□□□□ 0.5
CSGALNACT1-208ENST00000520003 CYP21A2P08686 494 aa18.19■□□□□ 0.5
CSGALNACT1-208ENST00000520003 HOXA13P31271 388 aaPredicted RBP18.19■□□□□ 0.5
CSGALNACT1-208ENST00000520003 PTPROQ16827 1216 aa18.19■□□□□ 0.5
CSGALNACT1-208ENST00000520003 ATP6V0A1Q93050 837 aa18.19■□□□□ 0.5
CSGALNACT1-208ENST00000520003 PABPC5Q96DU9 382 aaKnown RBP18.19■□□□□ 0.5
CSGALNACT1-208ENST00000520003 RNPEPQ9H4A4 650 aa18.19■□□□□ 0.5
CSGALNACT1-208ENST00000520003 TUT1Q9H6E5 874 aaKnown RBP18.19■□□□□ 0.5
CSGALNACT1-208ENST00000520003 BCAS3Q9H6U6 928 aa18.19■□□□□ 0.5
CSGALNACT1-208ENST00000520003 PCDHA1Q9Y5I3 950 aa18.19■□□□□ 0.5
CSGALNACT1-208ENST00000520003 BAZ2BQ9UIF8 2168 aaKnown RBP18.18■□□□□ 0.5
CSGALNACT1-208ENST00000520003 POTEB3A0JP26 581 aa18.18■□□□□ 0.5
CSGALNACT1-208ENST00000520003 TREHO43280 583 aa18.18■□□□□ 0.5
CSGALNACT1-208ENST00000520003 LGALS2P05162 132 aa18.18■□□□□ 0.5
CSGALNACT1-208ENST00000520003 SMIM10L2AP0DMW4 78 aa18.18■□□□□ 0.5
CSGALNACT1-208ENST00000520003 SMIM10L2BP0DMW5 78 aa18.18■□□□□ 0.5
CSGALNACT1-208ENST00000520003 ALADP13716 330 aa18.18■□□□□ 0.5
CSGALNACT1-208ENST00000520003 PTH1RQ03431 593 aa18.18■□□□□ 0.5
CSGALNACT1-208ENST00000520003 GRM4Q14833 912 aa18.18■□□□□ 0.5
CSGALNACT1-208ENST00000520003 POTEBQ6S5H4 581 aa18.18■□□□□ 0.5
CSGALNACT1-208ENST00000520003 BANK1Q8NDB2 785 aa18.18■□□□□ 0.5
CSGALNACT1-208ENST00000520003 SEPT8Q92599 483 aa18.18■□□□□ 0.5
CSGALNACT1-208ENST00000520003 RIOX1Q9H6W3 641 aa18.18■□□□□ 0.5
CSGALNACT1-208ENST00000520003 SENP2Q9HC62 589 aa18.18■□□□□ 0.5
CSGALNACT1-208ENST00000520003 TAF6LQ9Y6J9 622 aa18.18■□□□□ 0.5
CSGALNACT1-208ENST00000520003 FRMPD4Q14CM0 1322 aa18.18■□□□□ 0.5
CSGALNACT1-208ENST00000520003 H3BQ06 376 aaPredicted RBP18.17■□□□□ 0.5
CSGALNACT1-208ENST00000520003 CYTH3O43739 400 aa18.17■□□□□ 0.5
CSGALNACT1-208ENST00000520003 CCND2P30279 289 aa18.17■□□□□ 0.5
CSGALNACT1-208ENST00000520003 ICAM3P32942 547 aa18.17■□□□□ 0.5
CSGALNACT1-208ENST00000520003 ADAM17P78536 824 aa18.17■□□□□ 0.5
CSGALNACT1-208ENST00000520003 GPM6BQ13491 265 aa18.17■□□□□ 0.5
CSGALNACT1-208ENST00000520003 TCEAL5Q5H9L2 206 aa18.17■□□□□ 0.5
CSGALNACT1-208ENST00000520003 TMEM192Q8IY95 271 aa18.17■□□□□ 0.5
CSGALNACT1-208ENST00000520003 YME1L1Q96TA2 773 aa18.17■□□□□ 0.5
CSGALNACT1-208ENST00000520003 MLXIPQ9HAP2 919 aa18.17■□□□□ 0.5
CSGALNACT1-208ENST00000520003 C19orf67A6NJJ6 358 aa18.16■□□□□ 0.5
CSGALNACT1-208ENST00000520003 GCOM1H8Y6P7 765 aaPredicted RBP18.16■□□□□ 0.5
CSGALNACT1-208ENST00000520003 LINC00271P0C7V0 271 aa18.16■□□□□ 0.5
CSGALNACT1-208ENST00000520003 POLR2MP0CAP2 368 aa18.16■□□□□ 0.5
CSGALNACT1-208ENST00000520003 CHMLP26374 656 aa18.16■□□□□ 0.5
CSGALNACT1-208ENST00000520003 SSTR3P32745 418 aaPredicted RBP18.16■□□□□ 0.5
CSGALNACT1-208ENST00000520003 MRPS9P82933 396 aaKnown RBP18.16■□□□□ 0.5
CSGALNACT1-208ENST00000520003 ZP2Q05996 745 aa18.16■□□□□ 0.5
CSGALNACT1-208ENST00000520003 TROAPQ12815 778 aa18.16■□□□□ 0.5
CSGALNACT1-208ENST00000520003 FAM26DQ5JW98 314 aa18.16■□□□□ 0.5
CSGALNACT1-208ENST00000520003 ZFP91Q96JP5 570 aaPredicted RBP18.16■□□□□ 0.5
CSGALNACT1-208ENST00000520003 INPP4AQ96PE3 977 aaPredicted RBP18.16■□□□□ 0.5
CSGALNACT1-208ENST00000520003 PIGSQ96S52 555 aa18.16■□□□□ 0.5
CSGALNACT1-208ENST00000520003 USP26Q9BXU7 913 aa18.16■□□□□ 0.5
CSGALNACT1-208ENST00000520003 PRKAG3Q9UGI9 489 aa18.16■□□□□ 0.5
CSGALNACT1-208ENST00000520003 DOCK5Q9H7D0 1870 aa18.16■□□□□ 0.5
CSGALNACT1-208ENST00000520003 CTSHP09668 335 aa18.15■□□□□ 0.5
CSGALNACT1-208ENST00000520003 TRDNQ13061 729 aa18.15■□□□□ 0.5
CSGALNACT1-208ENST00000520003 SEMA3FQ13275 785 aa18.15■□□□□ 0.5
CSGALNACT1-208ENST00000520003 METTL7BQ6UX53 244 aa18.15■□□□□ 0.5
CSGALNACT1-208ENST00000520003 HOMER1Q86YM7 354 aa18.15■□□□□ 0.5
CSGALNACT1-208ENST00000520003 APBB2Q92870 758 aa18.15■□□□□ 0.5
CSGALNACT1-208ENST00000520003 NSUN3Q9H649 340 aaKnown RBP18.15■□□□□ 0.5
CSGALNACT1-208ENST00000520003 U3KPZ7 1027 aaPredicted RBP18.15■□□□□ 0.5
CSGALNACT1-208ENST00000520003 SPATA31C2B4DYI2 1134 aa18.14■□□□□ 0.49
CSGALNACT1-208ENST00000520003 E7EWF7 191 aa18.14■□□□□ 0.49
CSGALNACT1-208ENST00000520003 C5orf67F2Z3F1 127 aa18.14■□□□□ 0.49
CSGALNACT1-208ENST00000520003 IFIT3O14879 490 aaKnown RBP18.14■□□□□ 0.49
CSGALNACT1-208ENST00000520003 DCXO43602 365 aa18.14■□□□□ 0.49
CSGALNACT1-208ENST00000520003 STAM2O75886 525 aa18.14■□□□□ 0.49
CSGALNACT1-208ENST00000520003 UPP2O95045 317 aa18.14■□□□□ 0.49
CSGALNACT1-208ENST00000520003 LTBRP36941 435 aa18.14■□□□□ 0.49
CSGALNACT1-208ENST00000520003 ANTXR2P58335 489 aa18.14■□□□□ 0.49
CSGALNACT1-208ENST00000520003 TRAF1Q13077 416 aa18.14■□□□□ 0.49
CSGALNACT1-208ENST00000520003 CTC1Q2NKJ3 1217 aa18.14■□□□□ 0.49
CSGALNACT1-208ENST00000520003 GPR20Q99678 358 aa18.14■□□□□ 0.49
CSGALNACT1-208ENST00000520003 IFIH1Q9BYX4 1025 aaKnown RBP18.14■□□□□ 0.49
CSGALNACT1-208ENST00000520003 SETD4Q9NVD3 440 aa18.14■□□□□ 0.49
CSGALNACT1-208ENST00000520003 NOP56O00567 594 aaKnown RBP18.13■□□□□ 0.49
CSGALNACT1-208ENST00000520003 SGSM2O43147 1006 aa18.13■□□□□ 0.49
CSGALNACT1-208ENST00000520003 GNAT1P11488 350 aa18.13■□□□□ 0.49
CSGALNACT1-208ENST00000520003 NEDD9Q14511 834 aa18.13■□□□□ 0.49
CSGALNACT1-208ENST00000520003 GNPTABQ3T906 1256 aa18.13■□□□□ 0.49
CSGALNACT1-208ENST00000520003 RPAINQ86UA6 219 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms