RNA–Protein interactions for RNA: ENST00000515233.5

DDR1-278, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-278ENST00000515233 NEDD9Q14511 834 aa17.39■□□□□ 0.37
DDR1-278ENST00000515233 GNPTABQ3T906 1256 aa17.39■□□□□ 0.37
DDR1-278ENST00000515233 PLEKHG4Q58EX7 1191 aa17.39■□□□□ 0.37
DDR1-278ENST00000515233 TTC22Q5TAA0 569 aa17.39■□□□□ 0.37
DDR1-278ENST00000515233 NCOA7Q8NI08 942 aa17.39■□□□□ 0.37
DDR1-278ENST00000515233 RUFY2Q8WXA3 655 aa17.39■□□□□ 0.37
DDR1-278ENST00000515233 BCAS3Q9H6U6 928 aa17.39■□□□□ 0.37
DDR1-278ENST00000515233 RAPGEFL1Q9UHV5 662 aa17.39■□□□□ 0.37
DDR1-278ENST00000515233 MICAL3Q7RTP6 2002 aa17.38■□□□□ 0.37
DDR1-278ENST00000515233 SPATA31C2B4DYI2 1134 aa17.38■□□□□ 0.37
DDR1-278ENST00000515233 E7EWF7 191 aa17.38■□□□□ 0.37
DDR1-278ENST00000515233 TREHO43280 583 aa17.38■□□□□ 0.37
DDR1-278ENST00000515233 LGALS2P05162 132 aa17.38■□□□□ 0.37
DDR1-278ENST00000515233 SMIM10L2AP0DMW4 78 aa17.38■□□□□ 0.37
DDR1-278ENST00000515233 SMIM10L2BP0DMW5 78 aa17.38■□□□□ 0.37
DDR1-278ENST00000515233 PDE4AP27815 886 aa17.38■□□□□ 0.37
DDR1-278ENST00000515233 PTH1RQ03431 593 aa17.38■□□□□ 0.37
DDR1-278ENST00000515233 WTAPQ15007 396 aa17.38■□□□□ 0.37
DDR1-278ENST00000515233 SART3Q15020 963 aaKnown RBP17.38■□□□□ 0.37
DDR1-278ENST00000515233 SP7Q8TDD2 431 aaPredicted RBP17.38■□□□□ 0.37
DDR1-278ENST00000515233 MAP3K14Q99558 947 aa17.38■□□□□ 0.37
DDR1-278ENST00000515233 SENP2Q9HC62 589 aa17.38■□□□□ 0.37
DDR1-278ENST00000515233 NOP56O00567 594 aaKnown RBP17.37■□□□□ 0.37
DDR1-278ENST00000515233 CHMLP26374 656 aa17.37■□□□□ 0.37
DDR1-278ENST00000515233 FAM117BQ6P1L5 589 aa17.37■□□□□ 0.37
DDR1-278ENST00000515233 METTL7BQ6UX53 244 aa17.37■□□□□ 0.37
DDR1-278ENST00000515233 RALYLQ86SE5 291 aaKnown RBP17.37■□□□□ 0.37
DDR1-278ENST00000515233 IGDCC4Q8TDY8 1250 aa17.37■□□□□ 0.37
DDR1-278ENST00000515233 TOP1MTQ969P6 601 aa17.37■□□□□ 0.37
DDR1-278ENST00000515233 GPR20Q99678 358 aa17.37■□□□□ 0.37
DDR1-278ENST00000515233 MTUS1Q9ULD2 1270 aa17.37■□□□□ 0.37
DDR1-278ENST00000515233 FIBPO43427 364 aa17.36■□□□□ 0.37
DDR1-278ENST00000515233 GNAT1P11488 350 aa17.36■□□□□ 0.37
DDR1-278ENST00000515233 SMARCA1P28370 1054 aa17.36■□□□□ 0.37
DDR1-278ENST00000515233 ADAM17P78536 824 aa17.36■□□□□ 0.37
DDR1-278ENST00000515233 SEMA3FQ13275 785 aa17.36■□□□□ 0.37
DDR1-278ENST00000515233 XRRA1Q6P2D8 792 aa17.36■□□□□ 0.37
DDR1-278ENST00000515233 CYFIP1Q7L576 1253 aa17.36■□□□□ 0.37
DDR1-278ENST00000515233 CATIPQ7Z7H3 387 aa17.36■□□□□ 0.37
DDR1-278ENST00000515233 MYOCDQ8IZQ8 938 aa17.36■□□□□ 0.37
DDR1-278ENST00000515233 FBXO22Q8NEZ5 403 aa17.36■□□□□ 0.37
DDR1-278ENST00000515233 SEPT8Q92599 483 aa17.36■□□□□ 0.37
DDR1-278ENST00000515233 SAMD11Q96NU1 681 aa17.36■□□□□ 0.37
DDR1-278ENST00000515233 SENP7Q9BQF6 1050 aa17.36■□□□□ 0.37
DDR1-278ENST00000515233 C17orf80Q9BSJ5 609 aa17.36■□□□□ 0.37
DDR1-278ENST00000515233 EPHX3Q9H6B9 360 aa17.36■□□□□ 0.37
DDR1-278ENST00000515233 RTEL1Q9NZ71 1219 aa17.36■□□□□ 0.37
DDR1-278ENST00000515233 PIK3CDO00329 1044 aa17.35■□□□□ 0.37
DDR1-278ENST00000515233 PCNX4Q63HM2 1172 aa17.35■□□□□ 0.37
DDR1-278ENST00000515233 MAP4K1Q92918 833 aa17.35■□□□□ 0.37
DDR1-278ENST00000515233 SPZ1Q9BXG8 430 aa17.35■□□□□ 0.37
DDR1-278ENST00000515233 UBE2ZQ9H832 354 aaPredicted RBP17.35■□□□□ 0.37
DDR1-278ENST00000515233 SETD4Q9NVD3 440 aa17.35■□□□□ 0.37
DDR1-278ENST00000515233 TAF6LQ9Y6J9 622 aa17.35■□□□□ 0.37
DDR1-278ENST00000515233 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.34■□□□□ 0.37
DDR1-278ENST00000515233 RBAK-RBAKDNI3L0D1 243 aa17.34■□□□□ 0.37
DDR1-278ENST00000515233 MEIS2O14770 477 aa17.34■□□□□ 0.37
DDR1-278ENST00000515233 SGSM2O43147 1006 aa17.34■□□□□ 0.37
DDR1-278ENST00000515233 PLA2G5P39877 138 aa17.34■□□□□ 0.37
DDR1-278ENST00000515233 ANTXR2P58335 489 aa17.34■□□□□ 0.37
DDR1-278ENST00000515233 LEXMQ3ZCV2 418 aa17.34■□□□□ 0.37
DDR1-278ENST00000515233 FAM26DQ5JW98 314 aa17.34■□□□□ 0.37
DDR1-278ENST00000515233 APBB2Q92870 758 aa17.34■□□□□ 0.37
DDR1-278ENST00000515233 MTA3Q9BTC8 594 aa17.34■□□□□ 0.37
DDR1-278ENST00000515233 LRFN3Q9BTN0 628 aa17.34■□□□□ 0.37
DDR1-278ENST00000515233 ZNF215Q9UL58 517 aaPredicted RBP17.34■□□□□ 0.37
DDR1-278ENST00000515233 ARIH1Q9Y4X5 557 aaPredicted RBP17.34■□□□□ 0.37
DDR1-278ENST00000515233 KIF5BP33176 963 aa17.33■□□□□ 0.36
DDR1-278ENST00000515233 EPC2Q52LR7 807 aa17.33■□□□□ 0.36
DDR1-278ENST00000515233 RPAINQ86UA6 219 aa17.33■□□□□ 0.36
DDR1-278ENST00000515233 MB21D2Q8IYB1 491 aaPredicted RBP17.33■□□□□ 0.36
DDR1-278ENST00000515233 GIMAP8Q8ND71 665 aaPredicted RBP17.33■□□□□ 0.36
DDR1-278ENST00000515233 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.33■□□□□ 0.36
DDR1-278ENST00000515233 SMARCC2Q8TAQ2 1214 aa17.33■□□□□ 0.36
DDR1-278ENST00000515233 CUL5Q93034 780 aa17.33■□□□□ 0.36
DDR1-278ENST00000515233 MRPL38Q96DV4 380 aaKnown RBP17.33■□□□□ 0.36
DDR1-278ENST00000515233 RRP36Q96EU6 259 aaKnown RBP17.33■□□□□ 0.36
DDR1-278ENST00000515233 OSBPL7Q9BZF2 842 aa17.33■□□□□ 0.36
DDR1-278ENST00000515233 DOCK5Q9H7D0 1870 aa17.33■□□□□ 0.36
DDR1-278ENST00000515233 COL4A6Q14031 1691 aa17.32■□□□□ 0.36
DDR1-278ENST00000515233 NRCAMQ92823 1304 aa17.32■□□□□ 0.36
DDR1-278ENST00000515233 H3BNC9 293 aa17.32■□□□□ 0.36
DDR1-278ENST00000515233 GPR37L1O60883 481 aa17.32■□□□□ 0.36
DDR1-278ENST00000515233 PTPROQ16827 1216 aa17.32■□□□□ 0.36
DDR1-278ENST00000515233 USP17L6PQ6QN14 398 aa17.32■□□□□ 0.36
DDR1-278ENST00000515233 NLRX1Q86UT6 975 aa17.32■□□□□ 0.36
DDR1-278ENST00000515233 CTCFLQ8NI51 663 aaPredicted RBP17.32■□□□□ 0.36
DDR1-278ENST00000515233 KHSRPQ92945 711 aaKnown RBP eCLIP17.32■□□□□ 0.36
DDR1-278ENST00000515233 YME1L1Q96TA2 773 aa17.32■□□□□ 0.36
DDR1-278ENST00000515233 BRWD1Q9NSI6 2320 aa17.31■□□□□ 0.36
DDR1-278ENST00000515233 PI4K2BG5E9Z4 385 aa17.31■□□□□ 0.36
DDR1-278ENST00000515233 DDAH1O94760 285 aa17.31■□□□□ 0.36
DDR1-278ENST00000515233 CTSHP09668 335 aa17.31■□□□□ 0.36
DDR1-278ENST00000515233 TMEM31Q5JXX7 168 aa17.31■□□□□ 0.36
DDR1-278ENST00000515233 TRIM50Q86XT4 487 aa17.31■□□□□ 0.36
DDR1-278ENST00000515233 FAM178BQ8IXR5 827 aa17.31■□□□□ 0.36
DDR1-278ENST00000515233 ZNF654Q8IZM8 581 aa17.31■□□□□ 0.36
DDR1-278ENST00000515233 TMTC2Q8N394 836 aa17.31■□□□□ 0.36
DDR1-278ENST00000515233 PIBF1Q8WXW3 757 aa17.31■□□□□ 0.36
DDR1-278ENST00000515233 FAM122AQ96E09 287 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms