RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 SCG2P13521 617 aa8.21□□□□□ -1.09
PDLIM5-219ENST00000514743 CCT5P48643 541 aa8.21□□□□□ -1.09
PDLIM5-219ENST00000514743 FANCCQ00597 558 aa8.21□□□□□ -1.09
PDLIM5-219ENST00000514743 EIF2B5Q13144 721 aaKnown RBP8.21□□□□□ -1.09
PDLIM5-219ENST00000514743 CBX3Q13185 183 aa8.21□□□□□ -1.09
PDLIM5-219ENST00000514743 COL19A1Q14993 1142 aa8.21□□□□□ -1.09
PDLIM5-219ENST00000514743 TBC1D10BQ4KMP7 808 aaPredicted RBP8.21□□□□□ -1.09
PDLIM5-219ENST00000514743 SBK1Q52WX2 424 aa8.21□□□□□ -1.09
PDLIM5-219ENST00000514743 THOC7Q6I9Y2 204 aaKnown RBP8.21□□□□□ -1.09
PDLIM5-219ENST00000514743 SRBD1Q8N5C6 995 aaKnown RBP8.21□□□□□ -1.09
PDLIM5-219ENST00000514743 LRRN4CLQ8ND94 238 aa8.21□□□□□ -1.09
PDLIM5-219ENST00000514743 SPATA20Q8TB22 786 aa8.21□□□□□ -1.09
PDLIM5-219ENST00000514743 ANKRD2Q9GZV1 360 aa8.21□□□□□ -1.09
PDLIM5-219ENST00000514743 CSRNP2Q9H175 543 aa8.21□□□□□ -1.09
PDLIM5-219ENST00000514743 INTS13Q9NVM9 706 aa8.21□□□□□ -1.09
PDLIM5-219ENST00000514743 CROTQ9UKG9 612 aa8.21□□□□□ -1.09
PDLIM5-219ENST00000514743 MAN1B1Q9UKM7 699 aa8.21□□□□□ -1.09
PDLIM5-219ENST00000514743 FAN1Q9Y2M0 1017 aa8.21□□□□□ -1.09
PDLIM5-219ENST00000514743 ANKRD31Q8N7Z5 1873 aa8.21□□□□□ -1.09
PDLIM5-219ENST00000514743 ROBO3Q96MS0 1386 aa8.21□□□□□ -1.09
PDLIM5-219ENST00000514743 MYH8P13535 1937 aa8.21□□□□□ -1.1
PDLIM5-219ENST00000514743 PDLIM1O00151 329 aa8.21□□□□□ -1.1
PDLIM5-219ENST00000514743 GFPT2O94808 682 aa8.21□□□□□ -1.1
PDLIM5-219ENST00000514743 KIAA0754O94854 1291 aa8.21□□□□□ -1.1
PDLIM5-219ENST00000514743 CSPG5O95196 566 aa8.21□□□□□ -1.1
PDLIM5-219ENST00000514743 POU5F1Q01860 360 aaKnown RBP8.21□□□□□ -1.1
PDLIM5-219ENST00000514743 MYL5Q02045 173 aa8.21□□□□□ -1.1
PDLIM5-219ENST00000514743 GOLGA8FQ08AF8 430 aa8.21□□□□□ -1.1
PDLIM5-219ENST00000514743 GOLGA8DPQ0D2H9 430 aa8.21□□□□□ -1.1
PDLIM5-219ENST00000514743 SNCBQ16143 134 aa8.21□□□□□ -1.1
PDLIM5-219ENST00000514743 FAM47AQ5JRC9 791 aa8.21□□□□□ -1.1
PDLIM5-219ENST00000514743 ZCCHC8Q6NZY4 707 aaKnown RBP8.21□□□□□ -1.1
PDLIM5-219ENST00000514743 GRAMD1CQ8IYS0 662 aa8.21□□□□□ -1.1
PDLIM5-219ENST00000514743 ATP8A2Q9NTI2 1148 aa8.21□□□□□ -1.1
PDLIM5-219ENST00000514743 SERTAD1Q9UHV2 236 aa8.21□□□□□ -1.1
PDLIM5-219ENST00000514743 CCNL1Q9UK58 526 aaPredicted RBP8.21□□□□□ -1.1
PDLIM5-219ENST00000514743 JAG2Q9Y219 1238 aa8.21□□□□□ -1.1
PDLIM5-219ENST00000514743 QSER1Q2KHR3 1735 aa8.21□□□□□ -1.1
PDLIM5-219ENST00000514743 BRWD3Q6RI45 1802 aa8.21□□□□□ -1.1
PDLIM5-219ENST00000514743 POLR2DO15514 142 aaKnown RBP8.21□□□□□ -1.1
PDLIM5-219ENST00000514743 VEGFAP15692 232 aaPredicted RBP8.21□□□□□ -1.1
PDLIM5-219ENST00000514743 GSDMDP57764 484 aa8.21□□□□□ -1.1
PDLIM5-219ENST00000514743 GRIK5Q16478 980 aa8.21□□□□□ -1.1
PDLIM5-219ENST00000514743 E4F1Q66K89 784 aaPredicted RBP8.21□□□□□ -1.1
PDLIM5-219ENST00000514743 CCAR2Q8N163 923 aaKnown RBP8.21□□□□□ -1.1
PDLIM5-219ENST00000514743 DYDC1Q8WWB3 177 aa8.21□□□□□ -1.1
PDLIM5-219ENST00000514743 POM121Q96HA1 1249 aa8.21□□□□□ -1.1
PDLIM5-219ENST00000514743 NGLY1Q96IV0 654 aa8.21□□□□□ -1.1
PDLIM5-219ENST00000514743 JADE2Q9NQC1 790 aa8.21□□□□□ -1.1
PDLIM5-219ENST00000514743 ZMAT5Q9UDW3 170 aaKnown RBP8.21□□□□□ -1.1
PDLIM5-219ENST00000514743 V9GY48 417 aaPredicted RBP8.21□□□□□ -1.1
PDLIM5-219ENST00000514743 TOM1O60784 492 aa8.2□□□□□ -1.1
PDLIM5-219ENST00000514743 ZPR1O75312 459 aa8.2□□□□□ -1.1
PDLIM5-219ENST00000514743 KRT2P35908 639 aa8.2□□□□□ -1.1
PDLIM5-219ENST00000514743 ITIH3Q06033 890 aa8.2□□□□□ -1.1
PDLIM5-219ENST00000514743 FMR1Q06787 632 aaKnown RBP eCLIP8.2□□□□□ -1.13e-9■■■■■ 33
PDLIM5-219ENST00000514743 MORC3Q14149 939 aa8.2□□□□□ -1.1
PDLIM5-219ENST00000514743 TPTE2Q6XPS3 522 aa8.2□□□□□ -1.1
PDLIM5-219ENST00000514743 CCDC170Q8IYT3 715 aa8.2□□□□□ -1.1
PDLIM5-219ENST00000514743 GBP7Q8N8V2 638 aaPredicted RBP8.2□□□□□ -1.1
PDLIM5-219ENST00000514743 COMMD8Q9NX08 183 aa8.2□□□□□ -1.1
PDLIM5-219ENST00000514743 GALNT8Q9NY28 637 aa8.2□□□□□ -1.1
PDLIM5-219ENST00000514743 ARPP21Q9UBL0 812 aaPredicted RBP8.2□□□□□ -1.1
PDLIM5-219ENST00000514743 IP6K2Q9UHH9 426 aa8.2□□□□□ -1.1
PDLIM5-219ENST00000514743 IKBKGQ9Y6K9 419 aa8.2□□□□□ -1.1
PDLIM5-219ENST00000514743 ADAMTSL1Q8N6G6 1762 aa8.2□□□□□ -1.1
PDLIM5-219ENST00000514743 BICDL2A1A5D9 508 aa8.2□□□□□ -1.1
PDLIM5-219ENST00000514743 SMNDC1O75940 238 aaKnown RBP eCLIP8.2□□□□□ -1.1
PDLIM5-219ENST00000514743 PARNO95453 639 aaKnown RBP8.2□□□□□ -1.1
PDLIM5-219ENST00000514743 CALM1P0DP23 149 aa8.2□□□□□ -1.1
PDLIM5-219ENST00000514743 CALM2P0DP24 149 aa8.2□□□□□ -1.1
PDLIM5-219ENST00000514743 CALM3P0DP25 149 aa8.2□□□□□ -1.1
PDLIM5-219ENST00000514743 NFIXQ14938 502 aa8.2□□□□□ -1.1
PDLIM5-219ENST00000514743 IL17RBQ9NRM6 502 aa8.2□□□□□ -1.1
PDLIM5-219ENST00000514743 FANCLQ9NW38 375 aa8.2□□□□□ -1.1
PDLIM5-219ENST00000514743 RTCBQ9Y3I0 505 aaKnown RBP8.2□□□□□ -1.1
PDLIM5-219ENST00000514743 TMEM232C9JQI7 657 aa8.19□□□□□ -1.1
PDLIM5-219ENST00000514743 ZSCAN12O43309 604 aa8.19□□□□□ -1.1
PDLIM5-219ENST00000514743 B3GALNT1O75752 331 aa8.19□□□□□ -1.1
PDLIM5-219ENST00000514743 USP17L8P0C7I0 530 aa8.19□□□□□ -1.1
PDLIM5-219ENST00000514743 NCCRP1Q6ZVX7 275 aaPredicted RBP8.19□□□□□ -1.1
PDLIM5-219ENST00000514743 SH3RF1Q7Z6J0 888 aa8.19□□□□□ -1.1
PDLIM5-219ENST00000514743 GALNT15Q8N3T1 639 aa8.19□□□□□ -1.1
PDLIM5-219ENST00000514743 SPATA17Q96L03 361 aa8.19□□□□□ -1.1
PDLIM5-219ENST00000514743 CEP295NLQ96MC4 621 aa8.19□□□□□ -1.1
PDLIM5-219ENST00000514743 SPAG5Q96R06 1193 aa8.19□□□□□ -1.1
PDLIM5-219ENST00000514743 CRNKL1Q9BZJ0 848 aaKnown RBP8.19□□□□□ -1.1
PDLIM5-219ENST00000514743 SYNCQ9H7C4 482 aa8.19□□□□□ -1.1
PDLIM5-219ENST00000514743 PDE11AQ9HCR9 933 aa8.19□□□□□ -1.1
PDLIM5-219ENST00000514743 TMCC3Q9ULS5 477 aa8.19□□□□□ -1.1
PDLIM5-219ENST00000514743 CORO1CQ9ULV4 474 aaPredicted RBP8.19□□□□□ -1.1
PDLIM5-219ENST00000514743 TRPC6Q9Y210 931 aa8.19□□□□□ -1.1
PDLIM5-219ENST00000514743 ATP6V0A2Q9Y487 856 aa8.19□□□□□ -1.1
PDLIM5-219ENST00000514743 MTRF1O75570 445 aaKnown RBP8.19□□□□□ -1.1
PDLIM5-219ENST00000514743 ZNF18P17022 549 aa8.19□□□□□ -1.1
PDLIM5-219ENST00000514743 ZNF827Q17R98 1081 aa8.19□□□□□ -1.1
PDLIM5-219ENST00000514743 BZW1Q7L1Q6 419 aaKnown RBP8.19□□□□□ -1.1
PDLIM5-219ENST00000514743 ZFAND2BQ8WV99 257 aa8.19□□□□□ -1.1
PDLIM5-219ENST00000514743 HOOK2Q96ED9 719 aa8.19□□□□□ -1.1
PDLIM5-219ENST00000514743 EPSTI1Q96J88 318 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms