RNA–Protein interactions for RNA: ENST00000508308.1

HMGN1P16-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 16, humanhuman

BASIC

Gene HMGN1P16, Length 283 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P16-201ENST00000508308 C16orf70Q9BSU1 422 aa7.48□□□□□ -1.21
HMGN1P16-201ENST00000508308 OSBPL7Q9BZF2 842 aa7.48□□□□□ -1.21
HMGN1P16-201ENST00000508308 CERS4Q9HA82 394 aa7.48□□□□□ -1.21
HMGN1P16-201ENST00000508308 MTCH2Q9Y6C9 303 aa7.48□□□□□ -1.21
HMGN1P16-201ENST00000508308 PNMA6FA0A0J9YX94 578 aa7.47□□□□□ -1.21
HMGN1P16-201ENST00000508308 ARHGAP33O14559 1287 aa7.47□□□□□ -1.21
HMGN1P16-201ENST00000508308 IFIT3O14879 490 aaKnown RBP7.47□□□□□ -1.21
HMGN1P16-201ENST00000508308 LPXNO60711 386 aa7.47□□□□□ -1.21
HMGN1P16-201ENST00000508308 PPFIA4O75335 1185 aa7.47□□□□□ -1.21
HMGN1P16-201ENST00000508308 CKBP12277 381 aa7.47□□□□□ -1.21
HMGN1P16-201ENST00000508308 MYCLP12524 364 aaPredicted RBP7.47□□□□□ -1.21
HMGN1P16-201ENST00000508308 SELPP16109 830 aa7.47□□□□□ -1.21
HMGN1P16-201ENST00000508308 CASTP20810 708 aaKnown RBP7.47□□□□□ -1.21
HMGN1P16-201ENST00000508308 UBA1P22314 1058 aaKnown RBP7.47□□□□□ -1.21
HMGN1P16-201ENST00000508308 HOXC8P31273 242 aa7.47□□□□□ -1.21
HMGN1P16-201ENST00000508308 WDR5P61964 334 aaKnown RBP7.47□□□□□ -1.21
HMGN1P16-201ENST00000508308 IRX6P78412 446 aaPredicted RBP7.47□□□□□ -1.21
HMGN1P16-201ENST00000508308 DEFB103AP81534 67 aa7.47□□□□□ -1.21
HMGN1P16-201ENST00000508308 TFF2Q03403 129 aa7.47□□□□□ -1.21
HMGN1P16-201ENST00000508308 SEMA3FQ13275 785 aa7.47□□□□□ -1.21
HMGN1P16-201ENST00000508308 BFSP2Q13515 415 aa7.47□□□□□ -1.21
HMGN1P16-201ENST00000508308 LAMC2Q13753 1193 aa7.47□□□□□ -1.21
HMGN1P16-201ENST00000508308 MFSD10Q14728 455 aa7.47□□□□□ -1.21
HMGN1P16-201ENST00000508308 DGKDQ16760 1214 aa7.47□□□□□ -1.21
HMGN1P16-201ENST00000508308 KIAA0753Q2KHM9 967 aa7.47□□□□□ -1.21
HMGN1P16-201ENST00000508308 TMEM67Q5HYA8 995 aa7.47□□□□□ -1.21
HMGN1P16-201ENST00000508308 CELF3Q5SZQ8 465 aaKnown RBP7.47□□□□□ -1.21
HMGN1P16-201ENST00000508308 HOMER1Q86YM7 354 aa7.47□□□□□ -1.21
HMGN1P16-201ENST00000508308 MB21D2Q8IYB1 491 aaPredicted RBP7.47□□□□□ -1.21
HMGN1P16-201ENST00000508308 RETREG2Q8NC44 543 aa7.47□□□□□ -1.21
HMGN1P16-201ENST00000508308 CAGE1Q8TC20 777 aa7.47□□□□□ -1.21
HMGN1P16-201ENST00000508308 PHOSPHO2Q8TCD6 241 aa7.47□□□□□ -1.21
HMGN1P16-201ENST00000508308 ATXN2LQ8WWM7 1075 aaKnown RBP7.47□□□□□ -1.21
HMGN1P16-201ENST00000508308 SYMPKQ92797 1274 aaKnown RBP7.47□□□□□ -1.21
HMGN1P16-201ENST00000508308 SLC9A7Q96T83 725 aa7.47□□□□□ -1.21
HMGN1P16-201ENST00000508308 ALG1Q9BT22 464 aa7.47□□□□□ -1.21
HMGN1P16-201ENST00000508308 FTOQ9C0B1 505 aaKnown RBP eCLIP7.47□□□□□ -1.21
HMGN1P16-201ENST00000508308 MAP3K20Q9NYL2 800 aaKnown RBP7.47□□□□□ -1.21
HMGN1P16-201ENST00000508308 MRVI1Q9Y6F6 885 aa7.47□□□□□ -1.21
HMGN1P16-201ENST00000508308 TRIOO75962 3097 aa7.47□□□□□ -1.21
HMGN1P16-201ENST00000508308 FRMPD4Q14CM0 1322 aa7.47□□□□□ -1.21
HMGN1P16-201ENST00000508308 GCOM1H8Y6P7 765 aaPredicted RBP7.46□□□□□ -1.22
HMGN1P16-201ENST00000508308 BAIAP3O94812 1187 aa7.46□□□□□ -1.22
HMGN1P16-201ENST00000508308 GGPS1O95749 300 aa7.46□□□□□ -1.22
HMGN1P16-201ENST00000508308 POLR2MP0CAP2 368 aa7.46□□□□□ -1.22
HMGN1P16-201ENST00000508308 ACTN1P12814 892 aa7.46□□□□□ -1.22
HMGN1P16-201ENST00000508308 BMP1P13497 986 aa7.46□□□□□ -1.22
HMGN1P16-201ENST00000508308 PTK7Q13308 1070 aa7.46□□□□□ -1.22
HMGN1P16-201ENST00000508308 ZNF618Q5T7W0 954 aa7.46□□□□□ -1.22
HMGN1P16-201ENST00000508308 LRRC8DQ7L1W4 858 aa7.46□□□□□ -1.22
HMGN1P16-201ENST00000508308 SERINC5Q86VE9 423 aa7.46□□□□□ -1.22
HMGN1P16-201ENST00000508308 FCHSD1Q86WN1 690 aa7.46□□□□□ -1.22
HMGN1P16-201ENST00000508308 DHX37Q8IY37 1157 aaKnown RBP7.46□□□□□ -1.22
HMGN1P16-201ENST00000508308 C7orf31Q8N865 590 aa7.46□□□□□ -1.22
HMGN1P16-201ENST00000508308 ZNF775Q96BV0 537 aaPredicted RBP7.46□□□□□ -1.22
HMGN1P16-201ENST00000508308 SPATA33Q96N06 139 aa7.46□□□□□ -1.22
HMGN1P16-201ENST00000508308 INPP4AQ96PE3 977 aaPredicted RBP7.46□□□□□ -1.22
HMGN1P16-201ENST00000508308 LY9Q9HBG7 655 aa7.46□□□□□ -1.22
HMGN1P16-201ENST00000508308 THEGQ9P2T0 379 aa7.46□□□□□ -1.22
HMGN1P16-201ENST00000508308 NOD1Q9Y239 953 aa7.46□□□□□ -1.22
HMGN1P16-201ENST00000508308 COL4A4P53420 1690 aaPredicted RBP7.46□□□□□ -1.22
HMGN1P16-201ENST00000508308 C5orf42Q9H799 3197 aa7.46□□□□□ -1.22
HMGN1P16-201ENST00000508308 MICAL3Q7RTP6 2002 aa7.45□□□□□ -1.22
HMGN1P16-201ENST00000508308 SPATA31C2B4DYI2 1134 aa7.45□□□□□ -1.22
HMGN1P16-201ENST00000508308 TNFRSF10AO00220 468 aa7.45□□□□□ -1.22
HMGN1P16-201ENST00000508308 MEIS2O14770 477 aa7.45□□□□□ -1.22
HMGN1P16-201ENST00000508308 TGFB3P10600 412 aa7.45□□□□□ -1.22
HMGN1P16-201ENST00000508308 ICAM3P32942 547 aa7.45□□□□□ -1.22
HMGN1P16-201ENST00000508308 KCNQ1P51787 676 aa7.45□□□□□ -1.22
HMGN1P16-201ENST00000508308 PTPN5P54829 565 aa7.45□□□□□ -1.22
HMGN1P16-201ENST00000508308 ADAM17P78536 824 aa7.45□□□□□ -1.22
HMGN1P16-201ENST00000508308 MRPS5P82675 430 aaKnown RBP7.45□□□□□ -1.22
HMGN1P16-201ENST00000508308 TRDNQ13061 729 aa7.45□□□□□ -1.22
HMGN1P16-201ENST00000508308 GRB10Q13322 594 aa7.45□□□□□ -1.22
HMGN1P16-201ENST00000508308 WTAPQ15007 396 aa7.45□□□□□ -1.22
HMGN1P16-201ENST00000508308 CNKSR3Q6P9H4 555 aa7.45□□□□□ -1.22
HMGN1P16-201ENST00000508308 USP17L6PQ6QN14 398 aa7.45□□□□□ -1.22
HMGN1P16-201ENST00000508308 SAMD3Q8N6K7 520 aa7.45□□□□□ -1.22
HMGN1P16-201ENST00000508308 NCOA7Q8NI08 942 aa7.45□□□□□ -1.22
HMGN1P16-201ENST00000508308 ADAMTS19Q8TE59 1207 aa7.45□□□□□ -1.22
HMGN1P16-201ENST00000508308 PIBF1Q8WXW3 757 aa7.45□□□□□ -1.22
HMGN1P16-201ENST00000508308 ARNTL2Q8WYA1 636 aa7.45□□□□□ -1.22
HMGN1P16-201ENST00000508308 NECAB3Q96P71 396 aaPredicted RBP7.45□□□□□ -1.22
HMGN1P16-201ENST00000508308 MYL10Q9BUA6 226 aa7.45□□□□□ -1.22
HMGN1P16-201ENST00000508308 LSG1Q9H089 658 aaKnown RBP7.45□□□□□ -1.22
HMGN1P16-201ENST00000508308 RNPEPQ9H4A4 650 aa7.45□□□□□ -1.22
HMGN1P16-201ENST00000508308 RBM8AQ9Y5S9 174 aaKnown RBP7.45□□□□□ -1.22
HMGN1P16-201ENST00000508308 MYO7AQ13402 2215 aa7.45□□□□□ -1.22
HMGN1P16-201ENST00000508308 ABHD14A-ACY1A0A1B0GW23 586 aa7.44□□□□□ -1.22
HMGN1P16-201ENST00000508308 LINC01553A4QN01 128 aa7.44□□□□□ -1.22
HMGN1P16-201ENST00000508308 H3BRB1 525 aa7.44□□□□□ -1.22
HMGN1P16-201ENST00000508308 PIK3CDO00329 1044 aa7.44□□□□□ -1.22
HMGN1P16-201ENST00000508308 SH2B2O14492 632 aaPredicted RBP7.44□□□□□ -1.22
HMGN1P16-201ENST00000508308 TREHO43280 583 aa7.44□□□□□ -1.22
HMGN1P16-201ENST00000508308 TLL1O43897 1013 aa7.44□□□□□ -1.22
HMGN1P16-201ENST00000508308 GJB5O95377 273 aa7.44□□□□□ -1.22
HMGN1P16-201ENST00000508308 PLEKHA8P1O95397 391 aa7.44□□□□□ -1.22
HMGN1P16-201ENST00000508308 LGALS2P05162 132 aa7.44□□□□□ -1.22
HMGN1P16-201ENST00000508308 SMIM10L2AP0DMW4 78 aa7.44□□□□□ -1.22
HMGN1P16-201ENST00000508308 SMIM10L2BP0DMW5 78 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms