RNA–Protein interactions for RNA: ENST00000505149.1

LINC01088-202, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3

Gene LINC01088, Length 624 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-202ENST00000505149 LRG1P02750 347 aa5.49□□□□□ -1.53
LINC01088-202ENST00000505149 ITGA1P56199 1179 aa5.49□□□□□ -1.53
LINC01088-202ENST00000505149 PRR31Q5SQ13 230 aa5.49□□□□□ -1.53
LINC01088-202ENST00000505149 TEPPQ6URK8 271 aa5.49□□□□□ -1.53
LINC01088-202ENST00000505149 LILRB2Q8N423 598 aa5.49□□□□□ -1.53
LINC01088-202ENST00000505149 DDX11Q96FC9 970 aa5.49□□□□□ -1.53
LINC01088-202ENST00000505149 NOX5Q96PH1 765 aa5.49□□□□□ -1.53
LINC01088-202ENST00000505149 LNPKQ9C0E8 428 aa5.49□□□□□ -1.53
LINC01088-202ENST00000505149 IPPKQ9H8X2 491 aa5.49□□□□□ -1.53
LINC01088-202ENST00000505149 SPATA6Q9NWH7 488 aaPredicted RBP5.49□□□□□ -1.53
LINC01088-202ENST00000505149 TRAF6Q9Y4K3 522 aa5.49□□□□□ -1.53
LINC01088-202ENST00000505149 GNAT1P11488 350 aa5.48□□□□□ -1.53
LINC01088-202ENST00000505149 RPL13P26373 211 aaKnown RBP5.48□□□□□ -1.53
LINC01088-202ENST00000505149 THBS2P35442 1172 aa5.48□□□□□ -1.53
LINC01088-202ENST00000505149 CD300LDQ6UXZ3 194 aa5.48□□□□□ -1.53
LINC01088-202ENST00000505149 C16orf59Q7L2K0 433 aa5.48□□□□□ -1.53
LINC01088-202ENST00000505149 FAM26EQ8N5C1 309 aa5.48□□□□□ -1.53
LINC01088-202ENST00000505149 PCDH19Q8TAB3 1148 aa5.48□□□□□ -1.53
LINC01088-202ENST00000505149 MRFAP1L1Q96HT8 127 aa5.48□□□□□ -1.53
LINC01088-202ENST00000505149 NTMQ9P121 344 aa5.48□□□□□ -1.53
LINC01088-202ENST00000505149 PTCH2Q9Y6C5 1203 aa5.48□□□□□ -1.53
LINC01088-202ENST00000505149 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.47□□□□□ -1.53
LINC01088-202ENST00000505149 GSTA4O15217 222 aa5.47□□□□□ -1.53
LINC01088-202ENST00000505149 SASH1O94885 1247 aa5.47□□□□□ -1.53
LINC01088-202ENST00000505149 SLURP1P55000 103 aa5.47□□□□□ -1.53
LINC01088-202ENST00000505149 ADAM9Q13443 819 aa5.47□□□□□ -1.53
LINC01088-202ENST00000505149 GPR19Q15760 415 aa5.47□□□□□ -1.53
LINC01088-202ENST00000505149 KCTD1Q719H9 257 aa5.47□□□□□ -1.53
LINC01088-202ENST00000505149 MTDHQ86UE4 582 aaKnown RBP5.47□□□□□ -1.53
LINC01088-202ENST00000505149 CARFQ8N187 725 aa5.47□□□□□ -1.53
LINC01088-202ENST00000505149 ZNF526Q8TF50 670 aaPredicted RBP5.47□□□□□ -1.53
LINC01088-202ENST00000505149 CLEC4DQ8WXI8 215 aa5.47□□□□□ -1.53
LINC01088-202ENST00000505149 FBXW5Q969U6 566 aa5.47□□□□□ -1.53
LINC01088-202ENST00000505149 ZBTB8AQ96BR9 441 aa5.47□□□□□ -1.53
LINC01088-202ENST00000505149 WRNIP1Q96S55 665 aa5.47□□□□□ -1.53
LINC01088-202ENST00000505149 TMEM209Q96SK2 561 aa5.47□□□□□ -1.53
LINC01088-202ENST00000505149 YIPF4Q9BSR8 244 aa5.47□□□□□ -1.53
LINC01088-202ENST00000505149 XYLT2Q9H1B5 865 aa5.47□□□□□ -1.53
LINC01088-202ENST00000505149 SLC52A2Q9HAB3 445 aa5.47□□□□□ -1.53
LINC01088-202ENST00000505149 DSEQ9UL01 958 aa5.47□□□□□ -1.53
LINC01088-202ENST00000505149 PLD2O14939 933 aa5.46□□□□□ -1.54
LINC01088-202ENST00000505149 SLC27A2O14975 620 aa5.46□□□□□ -1.54
LINC01088-202ENST00000505149 NKRFO15226 690 aaKnown RBP eCLIP5.46□□□□□ -1.54
LINC01088-202ENST00000505149 SMARCA5O60264 1052 aaPredicted RBP5.46□□□□□ -1.54
LINC01088-202ENST00000505149 NPTXRO95502 500 aa5.46□□□□□ -1.54
LINC01088-202ENST00000505149 CRTAMO95727 393 aa5.46□□□□□ -1.54
LINC01088-202ENST00000505149 INHBBP09529 407 aa5.46□□□□□ -1.54
LINC01088-202ENST00000505149 FAHP16930 419 aa5.46□□□□□ -1.54
LINC01088-202ENST00000505149 BMP7P18075 431 aa5.46□□□□□ -1.54
LINC01088-202ENST00000505149 STAT5AP42229 794 aa5.46□□□□□ -1.54
LINC01088-202ENST00000505149 LACTBP83111 547 aaPredicted RBP5.46□□□□□ -1.54
LINC01088-202ENST00000505149 GUCY1A3Q02108 690 aa5.46□□□□□ -1.54
LINC01088-202ENST00000505149 TUSC3Q13454 348 aa5.46□□□□□ -1.54
LINC01088-202ENST00000505149 BMS1Q14692 1282 aaKnown RBP5.46□□□□□ -1.54
LINC01088-202ENST00000505149 CCDC144BQ3MJ40 725 aa5.46□□□□□ -1.54
LINC01088-202ENST00000505149 FAM26FQ5R3K3 315 aa5.46□□□□□ -1.54
LINC01088-202ENST00000505149 TTLL7Q6ZT98 887 aa5.46□□□□□ -1.54
LINC01088-202ENST00000505149 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.46□□□□□ -1.54
LINC01088-202ENST00000505149 PROSER1Q86XN7 944 aa5.46□□□□□ -1.54
LINC01088-202ENST00000505149 NLGN4XQ8N0W4 816 aa5.46□□□□□ -1.54
LINC01088-202ENST00000505149 SYNPOQ8N3V7 929 aa5.46□□□□□ -1.54
LINC01088-202ENST00000505149 SH3RF2Q8TEC5 729 aa5.46□□□□□ -1.54
LINC01088-202ENST00000505149 ZSWIM4Q9H7M6 989 aa5.46□□□□□ -1.54
LINC01088-202ENST00000505149 NCOA5Q9HCD5 579 aaKnown RBP5.46□□□□□ -1.54
LINC01088-202ENST00000505149 TMEM260Q9NX78 707 aa5.46□□□□□ -1.54
LINC01088-202ENST00000505149 RTEL1Q9NZ71 1219 aa5.46□□□□□ -1.54
LINC01088-202ENST00000505149 SFMBT1Q9UHJ3 866 aa5.46□□□□□ -1.54
LINC01088-202ENST00000505149 PCDHA8Q9Y5H6 950 aa5.46□□□□□ -1.54
LINC01088-202ENST00000505149 TCRBV5S4A2TA0A5A2 114 aa5.45□□□□□ -1.54
LINC01088-202ENST00000505149 CYP7B1O75881 506 aa5.45□□□□□ -1.54
LINC01088-202ENST00000505149 KCNC1P48547 511 aa5.45□□□□□ -1.54
LINC01088-202ENST00000505149 SARSP49591 514 aaKnown RBP5.45□□□□□ -1.54
LINC01088-202ENST00000505149 FNDC3BQ53EP0 1204 aaKnown RBP5.45□□□□□ -1.54
LINC01088-202ENST00000505149 FAM47CQ5HY64 1035 aa5.45□□□□□ -1.54
LINC01088-202ENST00000505149 FIGNQ5HY92 759 aa5.45□□□□□ -1.54
LINC01088-202ENST00000505149 FRMD5Q7Z6J6 570 aa5.45□□□□□ -1.54
LINC01088-202ENST00000505149 SLC7A14Q8TBB6 771 aa5.45□□□□□ -1.54
LINC01088-202ENST00000505149 KCNJ15Q99712 375 aa5.45□□□□□ -1.54
LINC01088-202ENST00000505149 CELF4Q9BZC1 486 aaKnown RBP5.45□□□□□ -1.54
LINC01088-202ENST00000505149 ZCCHC4Q9H5U6 513 aa5.45□□□□□ -1.54
LINC01088-202ENST00000505149 TRIM39Q9HCM9 518 aa5.45□□□□□ -1.54
LINC01088-202ENST00000505149 SRPK3Q9UPE1 567 aa5.45□□□□□ -1.54
LINC01088-202ENST00000505149 TELO2Q9Y4R8 837 aa5.45□□□□□ -1.54
LINC01088-202ENST00000505149 ZNF561-AS1K7EIQ3 104 aa5.44□□□□□ -1.54
LINC01088-202ENST00000505149 CHGBP05060 677 aa5.44□□□□□ -1.54
LINC01088-202ENST00000505149 CKMP06732 381 aa5.44□□□□□ -1.54
LINC01088-202ENST00000505149 COL6A2P12110 1019 aa5.44□□□□□ -1.54
LINC01088-202ENST00000505149 ZNF28P17035 718 aa5.44□□□□□ -1.54
LINC01088-202ENST00000505149 HOXA5P20719 270 aa5.44□□□□□ -1.54
LINC01088-202ENST00000505149 GJA4P35212 333 aa5.44□□□□□ -1.54
LINC01088-202ENST00000505149 SQSTM1Q13501 440 aa5.44□□□□□ -1.54
LINC01088-202ENST00000505149 VMACQ2NL98 169 aa5.44□□□□□ -1.54
LINC01088-202ENST00000505149 PAN2Q504Q3 1202 aaKnown RBP5.44□□□□□ -1.54
LINC01088-202ENST00000505149 ZFYVE27Q5T4F4 411 aa5.44□□□□□ -1.54
LINC01088-202ENST00000505149 HHIPL2Q6UWX4 724 aa5.44□□□□□ -1.54
LINC01088-202ENST00000505149 ZNF761Q86XN6 746 aaPredicted RBP5.44□□□□□ -1.54
LINC01088-202ENST00000505149 DTX3Q8N9I9 347 aa5.44□□□□□ -1.54
LINC01088-202ENST00000505149 SCLYQ96I15 445 aa5.44□□□□□ -1.54
LINC01088-202ENST00000505149 MAGEB10Q96LZ2 347 aaPredicted RBP5.44□□□□□ -1.54
LINC01088-202ENST00000505149 DLL4Q9NR61 685 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms