RNA–Protein interactions for RNA: ENST00000498837.1

SEC61A1-207, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2

Gene SEC61A1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-207ENST00000498837 H3BRB1 525 aa17.02■□□□□ 0.32
SEC61A1-207ENST00000498837 ZBTB5O15062 677 aa17.02■□□□□ 0.32
SEC61A1-207ENST00000498837 SMIM10L2AP0DMW4 78 aa17.02■□□□□ 0.32
SEC61A1-207ENST00000498837 SMIM10L2BP0DMW5 78 aa17.02■□□□□ 0.32
SEC61A1-207ENST00000498837 TGFB3P10600 412 aa17.02■□□□□ 0.32
SEC61A1-207ENST00000498837 HOXC8P31273 242 aa17.02■□□□□ 0.32
SEC61A1-207ENST00000498837 SEC23AQ15436 765 aa17.02■□□□□ 0.32
SEC61A1-207ENST00000498837 IMMTQ16891 758 aaKnown RBP17.02■□□□□ 0.32
SEC61A1-207ENST00000498837 SLC35G1Q2M3R5 365 aa17.02■□□□□ 0.32
SEC61A1-207ENST00000498837 IFIT1BQ5T764 474 aaKnown RBP17.02■□□□□ 0.32
SEC61A1-207ENST00000498837 NEK9Q8TD19 979 aa17.02■□□□□ 0.32
SEC61A1-207ENST00000498837 TOP1MTQ969P6 601 aa17.02■□□□□ 0.32
SEC61A1-207ENST00000498837 UBAC1Q9BSL1 405 aa17.02■□□□□ 0.32
SEC61A1-207ENST00000498837 DSCC1Q9BVC3 393 aa17.02■□□□□ 0.32
SEC61A1-207ENST00000498837 KRT23Q9C075 422 aa17.02■□□□□ 0.32
SEC61A1-207ENST00000498837 TUT1Q9H6E5 874 aaKnown RBP17.02■□□□□ 0.32
SEC61A1-207ENST00000498837 DIAPH3Q9NSV4 1193 aa17.02■□□□□ 0.32
SEC61A1-207ENST00000498837 TTC3P53804 2025 aa17.01■□□□□ 0.31
SEC61A1-207ENST00000498837 KIAA1671Q9BY89 1806 aa17.01■□□□□ 0.31
SEC61A1-207ENST00000498837 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.01■□□□□ 0.31
SEC61A1-207ENST00000498837 H3BNC9 293 aa17.01■□□□□ 0.31
SEC61A1-207ENST00000498837 LGALS2P05162 132 aa17.01■□□□□ 0.31
SEC61A1-207ENST00000498837 CTSHP09668 335 aa17.01■□□□□ 0.31
SEC61A1-207ENST00000498837 CCND2P30279 289 aa17.01■□□□□ 0.31
SEC61A1-207ENST00000498837 GPM6BQ13491 265 aa17.01■□□□□ 0.31
SEC61A1-207ENST00000498837 CYB5R4Q7L1T6 521 aa17.01■□□□□ 0.31
SEC61A1-207ENST00000498837 FCHSD1Q86WN1 690 aa17.01■□□□□ 0.31
SEC61A1-207ENST00000498837 HOMER1Q86YM7 354 aa17.01■□□□□ 0.31
SEC61A1-207ENST00000498837 SEPT8Q92599 483 aa17.01■□□□□ 0.31
SEC61A1-207ENST00000498837 YME1L1Q96TA2 773 aa17.01■□□□□ 0.31
SEC61A1-207ENST00000498837 CTNNA3Q9UI47 895 aa17.01■□□□□ 0.31
SEC61A1-207ENST00000498837 ZNF318Q5VUA4 2279 aa17■□□□□ 0.31
SEC61A1-207ENST00000498837 PALM3A6NDB9 673 aaPredicted RBP17■□□□□ 0.31
SEC61A1-207ENST00000498837 PRR33A8MZF0 331 aa17■□□□□ 0.31
SEC61A1-207ENST00000498837 PTPROQ16827 1216 aa17■□□□□ 0.31
SEC61A1-207ENST00000498837 TCEAL5Q5H9L2 206 aa17■□□□□ 0.31
SEC61A1-207ENST00000498837 TMEM192Q8IY95 271 aa17■□□□□ 0.31
SEC61A1-207ENST00000498837 SAMD3Q8N6K7 520 aa17■□□□□ 0.31
SEC61A1-207ENST00000498837 BANK1Q8NDB2 785 aa17■□□□□ 0.31
SEC61A1-207ENST00000498837 SAMD11Q96NU1 681 aa17■□□□□ 0.31
SEC61A1-207ENST00000498837 PIGSQ96S52 555 aa17■□□□□ 0.31
SEC61A1-207ENST00000498837 OSBPL3Q9H4L5 887 aa17■□□□□ 0.31
SEC61A1-207ENST00000498837 CNNM2Q9H8M5 875 aa17■□□□□ 0.31
SEC61A1-207ENST00000498837 WDFY4Q6ZS81 3184 aa17■□□□□ 0.31
SEC61A1-207ENST00000498837 COL4A6Q14031 1691 aa17■□□□□ 0.31
SEC61A1-207ENST00000498837 GCOM1H8Y6P7 765 aaPredicted RBP16.99■□□□□ 0.31
SEC61A1-207ENST00000498837 POLR2MP0CAP2 368 aa16.99■□□□□ 0.31
SEC61A1-207ENST00000498837 MRPS9P82933 396 aaKnown RBP16.99■□□□□ 0.31
SEC61A1-207ENST00000498837 TIGD5Q53EQ6 642 aa16.99■□□□□ 0.31
SEC61A1-207ENST00000498837 EP400NLQ6ZTU2 488 aa16.99■□□□□ 0.31
SEC61A1-207ENST00000498837 SMC5Q8IY18 1101 aa16.99■□□□□ 0.31
SEC61A1-207ENST00000498837 UIMC1Q96RL1 719 aa16.99■□□□□ 0.31
SEC61A1-207ENST00000498837 IL25Q9H293 177 aa16.99■□□□□ 0.31
SEC61A1-207ENST00000498837 SETD4Q9NVD3 440 aa16.99■□□□□ 0.31
SEC61A1-207ENST00000498837 TELO2Q9Y4R8 837 aa16.99■□□□□ 0.31
SEC61A1-207ENST00000498837 ALADP13716 330 aa16.98■□□□□ 0.31
SEC61A1-207ENST00000498837 SEMA3FQ13275 785 aa16.98■□□□□ 0.31
SEC61A1-207ENST00000498837 PUS10Q3MIT2 529 aaKnown RBP16.98■□□□□ 0.31
SEC61A1-207ENST00000498837 CYFIP1Q7L576 1253 aa16.98■□□□□ 0.31
SEC61A1-207ENST00000498837 ALYREFQ86V81 257 aaKnown RBP16.98■□□□□ 0.31
SEC61A1-207ENST00000498837 CHD1LQ86WJ1 897 aa16.98■□□□□ 0.31
SEC61A1-207ENST00000498837 TRIM50Q86XT4 487 aa16.98■□□□□ 0.31
SEC61A1-207ENST00000498837 PABPC5Q96DU9 382 aaKnown RBP16.98■□□□□ 0.31
SEC61A1-207ENST00000498837 IFIH1Q9BYX4 1025 aaKnown RBP16.98■□□□□ 0.31
SEC61A1-207ENST00000498837 RIOX1Q9H6W3 641 aa16.98■□□□□ 0.31
SEC61A1-207ENST00000498837 SUPT16HQ9Y5B9 1047 aaKnown RBP16.98■□□□□ 0.31
SEC61A1-207ENST00000498837 NOP56O00567 594 aaKnown RBP16.97■□□□□ 0.31
SEC61A1-207ENST00000498837 CYTH3O43739 400 aa16.97■□□□□ 0.31
SEC61A1-207ENST00000498837 GRM4Q14833 912 aa16.97■□□□□ 0.31
SEC61A1-207ENST00000498837 GPR20Q99678 358 aa16.97■□□□□ 0.31
SEC61A1-207ENST00000498837 USP26Q9BXU7 913 aa16.97■□□□□ 0.31
SEC61A1-207ENST00000498837 NSUN3Q9H649 340 aaKnown RBP16.97■□□□□ 0.31
SEC61A1-207ENST00000498837 SENP2Q9HC62 589 aa16.97■□□□□ 0.31
SEC61A1-207ENST00000498837 RTEL1Q9NZ71 1219 aa16.97■□□□□ 0.31
SEC61A1-207ENST00000498837 HIP1O00291 1037 aa16.96■□□□□ 0.31
SEC61A1-207ENST00000498837 CAND2O75155 1236 aa16.96■□□□□ 0.31
SEC61A1-207ENST00000498837 IGHDP01880 384 aa16.96■□□□□ 0.31
SEC61A1-207ENST00000498837 ICAM3P32942 547 aa16.96■□□□□ 0.31
SEC61A1-207ENST00000498837 LTBRP36941 435 aa16.96■□□□□ 0.31
SEC61A1-207ENST00000498837 ADAM17P78536 824 aa16.96■□□□□ 0.31
SEC61A1-207ENST00000498837 ZP2Q05996 745 aa16.96■□□□□ 0.31
SEC61A1-207ENST00000498837 COL19A1Q14993 1142 aa16.96■□□□□ 0.31
SEC61A1-207ENST00000498837 FAM26DQ5JW98 314 aa16.96■□□□□ 0.31
SEC61A1-207ENST00000498837 UTP14CQ5TAP6 766 aaKnown RBP16.96■□□□□ 0.31
SEC61A1-207ENST00000498837 INPP4AQ96PE3 977 aaPredicted RBP16.96■□□□□ 0.31
SEC61A1-207ENST00000498837 CLDND1Q9NY35 253 aa16.96■□□□□ 0.31
SEC61A1-207ENST00000498837 TECTAO75443 2155 aa16.95■□□□□ 0.3
SEC61A1-207ENST00000498837 PNMA6FA0A0J9YX94 578 aa16.95■□□□□ 0.3
SEC61A1-207ENST00000498837 POTEB3A0JP26 581 aa16.95■□□□□ 0.3
SEC61A1-207ENST00000498837 SPATA31C2B4DYI2 1134 aa16.95■□□□□ 0.3
SEC61A1-207ENST00000498837 DCXO43602 365 aa16.95■□□□□ 0.3
SEC61A1-207ENST00000498837 GNAT1P11488 350 aa16.95■□□□□ 0.3
SEC61A1-207ENST00000498837 ARHGAP4P98171 946 aa16.95■□□□□ 0.3
SEC61A1-207ENST00000498837 NUCB1Q02818 461 aa16.95■□□□□ 0.3
SEC61A1-207ENST00000498837 NEDD9Q14511 834 aa16.95■□□□□ 0.3
SEC61A1-207ENST00000498837 CSPP1Q1MSJ5 1256 aa16.95■□□□□ 0.3
SEC61A1-207ENST00000498837 GNPTABQ3T906 1256 aa16.95■□□□□ 0.3
SEC61A1-207ENST00000498837 POTEBQ6S5H4 581 aa16.95■□□□□ 0.3
SEC61A1-207ENST00000498837 METTL7BQ6UX53 244 aa16.95■□□□□ 0.3
SEC61A1-207ENST00000498837 LMBR1Q8WVP7 490 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms