RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 MAD2L2Q9UI95 211 aa17.08■□□□□ 0.32
TRAF4-212ENST00000498540 BAZ2BQ9UIF8 2168 aaKnown RBP17.07■□□□□ 0.32
TRAF4-212ENST00000498540 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.07■□□□□ 0.32
TRAF4-212ENST00000498540 H3BNC9 293 aa17.07■□□□□ 0.32
TRAF4-212ENST00000498540 UPP2O95045 317 aa17.07■□□□□ 0.32
TRAF4-212ENST00000498540 CCND2P30279 289 aa17.07■□□□□ 0.32
TRAF4-212ENST00000498540 PTPROQ16827 1216 aa17.07■□□□□ 0.32
TRAF4-212ENST00000498540 IMMTQ16891 758 aaKnown RBP17.07■□□□□ 0.32
TRAF4-212ENST00000498540 TIGD5Q53EQ6 642 aa17.07■□□□□ 0.32
TRAF4-212ENST00000498540 TCEAL5Q5H9L2 206 aa17.07■□□□□ 0.32
TRAF4-212ENST00000498540 IFIT1BQ5T764 474 aaKnown RBP17.07■□□□□ 0.32
TRAF4-212ENST00000498540 BANK1Q8NDB2 785 aa17.07■□□□□ 0.32
TRAF4-212ENST00000498540 SEPT8Q92599 483 aa17.07■□□□□ 0.32
TRAF4-212ENST00000498540 TOP1MTQ969P6 601 aa17.07■□□□□ 0.32
TRAF4-212ENST00000498540 SAMD11Q96NU1 681 aa17.07■□□□□ 0.32
TRAF4-212ENST00000498540 DSCC1Q9BVC3 393 aa17.07■□□□□ 0.32
TRAF4-212ENST00000498540 KRT23Q9C075 422 aa17.07■□□□□ 0.32
TRAF4-212ENST00000498540 RNPEPQ9H4A4 650 aa17.07■□□□□ 0.32
TRAF4-212ENST00000498540 MLXIPQ9HAP2 919 aa17.07■□□□□ 0.32
TRAF4-212ENST00000498540 DIAPH3Q9NSV4 1193 aa17.07■□□□□ 0.32
TRAF4-212ENST00000498540 MAP3K20Q9NYL2 800 aaKnown RBP17.07■□□□□ 0.32
TRAF4-212ENST00000498540 CTNNA3Q9UI47 895 aa17.07■□□□□ 0.32
TRAF4-212ENST00000498540 PIEZO1Q92508 2521 aa17.07■□□□□ 0.32
TRAF4-212ENST00000498540 TGFB3P10600 412 aa17.06■□□□□ 0.32
TRAF4-212ENST00000498540 GPM6BQ13491 265 aa17.06■□□□□ 0.32
TRAF4-212ENST00000498540 SEC23AQ15436 765 aa17.06■□□□□ 0.32
TRAF4-212ENST00000498540 B4GALNT3Q6L9W6 998 aa17.06■□□□□ 0.32
TRAF4-212ENST00000498540 FCHSD1Q86WN1 690 aa17.06■□□□□ 0.32
TRAF4-212ENST00000498540 HOMER1Q86YM7 354 aa17.06■□□□□ 0.32
TRAF4-212ENST00000498540 PLEKHM2Q8IWE5 1019 aa17.06■□□□□ 0.32
TRAF4-212ENST00000498540 TMEM192Q8IY95 271 aa17.06■□□□□ 0.32
TRAF4-212ENST00000498540 MYO7AQ13402 2215 aa17.05■□□□□ 0.32
TRAF4-212ENST00000498540 PALM3A6NDB9 673 aaPredicted RBP17.05■□□□□ 0.32
TRAF4-212ENST00000498540 COL19A1Q14993 1142 aa17.05■□□□□ 0.32
TRAF4-212ENST00000498540 PUS10Q3MIT2 529 aaKnown RBP17.05■□□□□ 0.32
TRAF4-212ENST00000498540 CYB5R4Q7L1T6 521 aa17.05■□□□□ 0.32
TRAF4-212ENST00000498540 SAMD3Q8N6K7 520 aa17.05■□□□□ 0.32
TRAF4-212ENST00000498540 PABPC5Q96DU9 382 aaKnown RBP17.05■□□□□ 0.32
TRAF4-212ENST00000498540 PIGSQ96S52 555 aa17.05■□□□□ 0.32
TRAF4-212ENST00000498540 CNNM2Q9H8M5 875 aa17.05■□□□□ 0.32
TRAF4-212ENST00000498540 GCOM1H8Y6P7 765 aaPredicted RBP17.04■□□□□ 0.32
TRAF4-212ENST00000498540 NOP56O00567 594 aaKnown RBP17.04■□□□□ 0.32
TRAF4-212ENST00000498540 CAND2O75155 1236 aa17.04■□□□□ 0.32
TRAF4-212ENST00000498540 POLR2MP0CAP2 368 aa17.04■□□□□ 0.32
TRAF4-212ENST00000498540 ALADP13716 330 aa17.04■□□□□ 0.32
TRAF4-212ENST00000498540 MRPS9P82933 396 aaKnown RBP17.04■□□□□ 0.32
TRAF4-212ENST00000498540 SEMA3FQ13275 785 aa17.04■□□□□ 0.32
TRAF4-212ENST00000498540 EP400NLQ6ZTU2 488 aa17.04■□□□□ 0.32
TRAF4-212ENST00000498540 TRIM50Q86XT4 487 aa17.04■□□□□ 0.32
TRAF4-212ENST00000498540 SMC5Q8IY18 1101 aa17.04■□□□□ 0.32
TRAF4-212ENST00000498540 UIMC1Q96RL1 719 aa17.04■□□□□ 0.32
TRAF4-212ENST00000498540 IFIH1Q9BYX4 1025 aaKnown RBP17.04■□□□□ 0.32
TRAF4-212ENST00000498540 IL25Q9H293 177 aa17.04■□□□□ 0.32
TRAF4-212ENST00000498540 OSBPL3Q9H4L5 887 aa17.04■□□□□ 0.32
TRAF4-212ENST00000498540 NSUN3Q9H649 340 aaKnown RBP17.04■□□□□ 0.32
TRAF4-212ENST00000498540 SETD4Q9NVD3 440 aa17.04■□□□□ 0.32
TRAF4-212ENST00000498540 TELO2Q9Y4R8 837 aa17.04■□□□□ 0.32
TRAF4-212ENST00000498540 FRMPD4Q14CM0 1322 aa17.03■□□□□ 0.32
TRAF4-212ENST00000498540 ZP2Q05996 745 aa17.03■□□□□ 0.32
TRAF4-212ENST00000498540 CYFIP1Q7L576 1253 aa17.03■□□□□ 0.32
TRAF4-212ENST00000498540 ALYREFQ86V81 257 aaKnown RBP17.03■□□□□ 0.32
TRAF4-212ENST00000498540 CHD1LQ86WJ1 897 aa17.03■□□□□ 0.32
TRAF4-212ENST00000498540 GPR20Q99678 358 aa17.03■□□□□ 0.32
TRAF4-212ENST00000498540 RIOX1Q9H6W3 641 aa17.03■□□□□ 0.32
TRAF4-212ENST00000498540 DCXO43602 365 aa17.02■□□□□ 0.32
TRAF4-212ENST00000498540 CYTH3O43739 400 aa17.02■□□□□ 0.32
TRAF4-212ENST00000498540 ADAM17P78536 824 aa17.02■□□□□ 0.32
TRAF4-212ENST00000498540 GRM4Q14833 912 aa17.02■□□□□ 0.32
TRAF4-212ENST00000498540 METTL7BQ6UX53 244 aa17.02■□□□□ 0.32
TRAF4-212ENST00000498540 LMBR1Q8WVP7 490 aa17.02■□□□□ 0.32
TRAF4-212ENST00000498540 INPP4AQ96PE3 977 aaPredicted RBP17.02■□□□□ 0.32
TRAF4-212ENST00000498540 USP26Q9BXU7 913 aa17.02■□□□□ 0.32
TRAF4-212ENST00000498540 SENP2Q9HC62 589 aa17.02■□□□□ 0.32
TRAF4-212ENST00000498540 CLDND1Q9NY35 253 aa17.02■□□□□ 0.32
TRAF4-212ENST00000498540 SUPT16HQ9Y5B9 1047 aaKnown RBP17.02■□□□□ 0.32
TRAF4-212ENST00000498540 C5orf42Q9H799 3197 aa17.01■□□□□ 0.31
TRAF4-212ENST00000498540 KAT6AQ92794 2004 aa17.01■□□□□ 0.31
TRAF4-212ENST00000498540 POTEB3A0JP26 581 aa17.01■□□□□ 0.31
TRAF4-212ENST00000498540 SPATA31C2B4DYI2 1134 aa17.01■□□□□ 0.31
TRAF4-212ENST00000498540 HIP1O00291 1037 aa17.01■□□□□ 0.31
TRAF4-212ENST00000498540 LINC00271P0C7V0 271 aa17.01■□□□□ 0.31
TRAF4-212ENST00000498540 ICAM3P32942 547 aa17.01■□□□□ 0.31
TRAF4-212ENST00000498540 CTNNB1P35222 781 aa17.01■□□□□ 0.31
TRAF4-212ENST00000498540 LTBRP36941 435 aa17.01■□□□□ 0.31
TRAF4-212ENST00000498540 CSPP1Q1MSJ5 1256 aa17.01■□□□□ 0.31
TRAF4-212ENST00000498540 GNPTABQ3T906 1256 aa17.01■□□□□ 0.31
TRAF4-212ENST00000498540 POTEBQ6S5H4 581 aa17.01■□□□□ 0.31
TRAF4-212ENST00000498540 RPAINQ86UA6 219 aa17.01■□□□□ 0.31
TRAF4-212ENST00000498540 APBB2Q92870 758 aa17.01■□□□□ 0.31
TRAF4-212ENST00000498540 RTEL1Q9NZ71 1219 aa17.01■□□□□ 0.31
TRAF4-212ENST00000498540 C19orf67A6NJJ6 358 aa17■□□□□ 0.31
TRAF4-212ENST00000498540 GNAT1P11488 350 aa17■□□□□ 0.31
TRAF4-212ENST00000498540 ARHGAP4P98171 946 aa17■□□□□ 0.31
TRAF4-212ENST00000498540 SP4Q02446 784 aa17■□□□□ 0.31
TRAF4-212ENST00000498540 NUCB1Q02818 461 aa17■□□□□ 0.31
TRAF4-212ENST00000498540 NEDD9Q14511 834 aa17■□□□□ 0.31
TRAF4-212ENST00000498540 FAM26DQ5JW98 314 aa17■□□□□ 0.31
TRAF4-212ENST00000498540 UTP14CQ5TAP6 766 aaKnown RBP17■□□□□ 0.31
TRAF4-212ENST00000498540 FIBCD1Q8N539 461 aa17■□□□□ 0.31
TRAF4-212ENST00000498540 IL17RAQ96F46 866 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms