RNA–Protein interactions for RNA: ENST00000494069.1

LRCH3-219, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 783 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-219ENST00000494069 ICAM3P32942 547 aa9.83□□□□□ -0.84
LRCH3-219ENST00000494069 FUT2Q10981 343 aa9.83□□□□□ -0.84
LRCH3-219ENST00000494069 TCTN1Q2MV58 587 aa9.83□□□□□ -0.84
LRCH3-219ENST00000494069 WWC2Q6AWC2 1192 aa9.83□□□□□ -0.84
LRCH3-219ENST00000494069 KCNV1Q6PIU1 500 aa9.83□□□□□ -0.84
LRCH3-219ENST00000494069 CYFIP1Q7L576 1253 aa9.83□□□□□ -0.84
LRCH3-219ENST00000494069 HEATR3Q7Z4Q2 680 aa9.83□□□□□ -0.84
LRCH3-219ENST00000494069 RPUSD2Q8IZ73 545 aaKnown RBP9.83□□□□□ -0.84
LRCH3-219ENST00000494069 C7orf31Q8N865 590 aa9.83□□□□□ -0.84
LRCH3-219ENST00000494069 RETREG2Q8NC44 543 aa9.83□□□□□ -0.84
LRCH3-219ENST00000494069 KCNB2Q92953 911 aa9.83□□□□□ -0.84
LRCH3-219ENST00000494069 CUL5Q93034 780 aa9.83□□□□□ -0.84
LRCH3-219ENST00000494069 C16orf70Q9BSU1 422 aa9.83□□□□□ -0.84
LRCH3-219ENST00000494069 NKX2-4Q9H2Z4 354 aa9.83□□□□□ -0.84
LRCH3-219ENST00000494069 ZNF576Q9H609 170 aa9.83□□□□□ -0.84
LRCH3-219ENST00000494069 PSTPIP2Q9H939 334 aa9.83□□□□□ -0.84
LRCH3-219ENST00000494069 SNX14Q9Y5W7 946 aa9.83□□□□□ -0.84
LRCH3-219ENST00000494069 V9GY48 417 aaPredicted RBP9.83□□□□□ -0.84
LRCH3-219ENST00000494069 CHD9Q3L8U1 2897 aa9.83□□□□□ -0.84
LRCH3-219ENST00000494069 CNTNAP5Q8WYK1 1306 aa9.82□□□□□ -0.84
LRCH3-219ENST00000494069 ZBTB43O43298 467 aa9.82□□□□□ -0.84
LRCH3-219ENST00000494069 ATP9AO75110 1047 aa9.82□□□□□ -0.84
LRCH3-219ENST00000494069 PPFIA4O75335 1185 aa9.82□□□□□ -0.84
LRCH3-219ENST00000494069 ITGB5P18084 799 aa9.82□□□□□ -0.84
LRCH3-219ENST00000494069 HSPA4P34932 840 aa9.82□□□□□ -0.84
LRCH3-219ENST00000494069 ADD1P35611 737 aaKnown RBP9.82□□□□□ -0.84
LRCH3-219ENST00000494069 SP4Q02446 784 aa9.82□□□□□ -0.84
LRCH3-219ENST00000494069 APOBRQ0VD83 1088 aa9.82□□□□□ -0.84
LRCH3-219ENST00000494069 RTN1Q16799 776 aa9.82□□□□□ -0.84
LRCH3-219ENST00000494069 TRIM71Q2Q1W2 868 aaKnown RBP9.82□□□□□ -0.84
LRCH3-219ENST00000494069 PCNX4Q63HM2 1172 aa9.82□□□□□ -0.84
LRCH3-219ENST00000494069 TRAF7Q6Q0C0 670 aa9.82□□□□□ -0.84
LRCH3-219ENST00000494069 SYNE3Q6ZMZ3 975 aa9.82□□□□□ -0.84
LRCH3-219ENST00000494069 TRIM50Q86XT4 487 aa9.82□□□□□ -0.84
LRCH3-219ENST00000494069 PGBD1Q96JS3 809 aa9.82□□□□□ -0.84
LRCH3-219ENST00000494069 JAKMIP1Q96N16 626 aaKnown RBP9.82□□□□□ -0.84
LRCH3-219ENST00000494069 GPR20Q99678 358 aa9.82□□□□□ -0.84
LRCH3-219ENST00000494069 FTOQ9C0B1 505 aaKnown RBP eCLIP9.82□□□□□ -0.84
LRCH3-219ENST00000494069 NAP1L2Q9ULW6 460 aaPredicted RBP9.82□□□□□ -0.84
LRCH3-219ENST00000494069 PCDHA6Q9UN73 950 aa9.82□□□□□ -0.84
LRCH3-219ENST00000494069 PCDHA8Q9Y5H6 950 aa9.82□□□□□ -0.84
LRCH3-219ENST00000494069 SLC4A7Q9Y6M7 1214 aa9.82□□□□□ -0.84
LRCH3-219ENST00000494069 TET1Q8NFU7 2136 aa9.82□□□□□ -0.84
LRCH3-219ENST00000494069 UNC80Q8N2C7 3258 aa9.81□□□□□ -0.84
LRCH3-219ENST00000494069 TRIP12Q14669 1992 aaPredicted RBP9.81□□□□□ -0.84
LRCH3-219ENST00000494069 TMEM265A0A087WTH1 108 aa9.81□□□□□ -0.84
LRCH3-219ENST00000494069 GOLGA8AA7E2F4 631 aa9.81□□□□□ -0.84
LRCH3-219ENST00000494069 GOLGA8BA8MQT2 603 aa9.81□□□□□ -0.84
LRCH3-219ENST00000494069 H3BRB1 525 aa9.81□□□□□ -0.84
LRCH3-219ENST00000494069 ADAMTS3O15072 1205 aa9.81□□□□□ -0.84
LRCH3-219ENST00000494069 FIBPO43427 364 aa9.81□□□□□ -0.84
LRCH3-219ENST00000494069 NBNO60934 754 aa9.81□□□□□ -0.84
LRCH3-219ENST00000494069 PPFIA3O75145 1194 aa9.81□□□□□ -0.84
LRCH3-219ENST00000494069 LGALS2P05162 132 aa9.81□□□□□ -0.84
LRCH3-219ENST00000494069 CKBP12277 381 aa9.81□□□□□ -0.84
LRCH3-219ENST00000494069 FOSL2P15408 326 aa9.81□□□□□ -0.84
LRCH3-219ENST00000494069 BFSP2Q13515 415 aa9.81□□□□□ -0.84
LRCH3-219ENST00000494069 ADGRE1Q14246 886 aa9.81□□□□□ -0.84
LRCH3-219ENST00000494069 KRT32Q14532 448 aa9.81□□□□□ -0.84
LRCH3-219ENST00000494069 GNPTABQ3T906 1256 aa9.81□□□□□ -0.84
LRCH3-219ENST00000494069 UTP14CQ5TAP6 766 aaKnown RBP9.81□□□□□ -0.84
LRCH3-219ENST00000494069 METTL7BQ6UX53 244 aa9.81□□□□□ -0.84
LRCH3-219ENST00000494069 Q6ZUG5 572 aa9.81□□□□□ -0.84
LRCH3-219ENST00000494069 LRRC8DQ7L1W4 858 aa9.81□□□□□ -0.84
LRCH3-219ENST00000494069 TMCO2Q7Z6W1 182 aaPredicted RBP9.81□□□□□ -0.84
LRCH3-219ENST00000494069 USP38Q8NB14 1042 aa9.81□□□□□ -0.84
LRCH3-219ENST00000494069 MAFAQ8NHW3 353 aaPredicted RBP9.81□□□□□ -0.84
LRCH3-219ENST00000494069 KATNAL1Q9BW62 490 aa9.81□□□□□ -0.84
LRCH3-219ENST00000494069 OSBPL7Q9BZF2 842 aa9.81□□□□□ -0.84
LRCH3-219ENST00000494069 MTIF3Q9H2K0 278 aaKnown RBP9.81□□□□□ -0.84
LRCH3-219ENST00000494069 PRDM12Q9H4Q4 367 aa9.81□□□□□ -0.84
LRCH3-219ENST00000494069 TUT1Q9H6E5 874 aaKnown RBP9.81□□□□□ -0.84
LRCH3-219ENST00000494069 TMEM260Q9NX78 707 aa9.81□□□□□ -0.84
LRCH3-219ENST00000494069 PKD2L1Q9P0L9 805 aa9.81□□□□□ -0.84
LRCH3-219ENST00000494069 CHD7Q9P2D1 2997 aa9.81□□□□□ -0.84
LRCH3-219ENST00000494069 DOCK5Q9H7D0 1870 aa9.81□□□□□ -0.84
LRCH3-219ENST00000494069 STXBP3O00186 592 aa9.8□□□□□ -0.84
LRCH3-219ENST00000494069 NOP56O00567 594 aaKnown RBP9.8□□□□□ -0.84
LRCH3-219ENST00000494069 TREHO43280 583 aa9.8□□□□□ -0.84
LRCH3-219ENST00000494069 STAM2O75886 525 aa9.8□□□□□ -0.84
LRCH3-219ENST00000494069 ARHGEF15O94989 841 aa9.8□□□□□ -0.84
LRCH3-219ENST00000494069 PFKMP08237 780 aa9.8□□□□□ -0.84
LRCH3-219ENST00000494069 SMIM10L2AP0DMW4 78 aa9.8□□□□□ -0.84
LRCH3-219ENST00000494069 SMIM10L2BP0DMW5 78 aa9.8□□□□□ -0.84
LRCH3-219ENST00000494069 SELPP16109 830 aa9.8□□□□□ -0.84
LRCH3-219ENST00000494069 KCNA2P16389 499 aa9.8□□□□□ -0.84
LRCH3-219ENST00000494069 ATP2A2P16615 1042 aaKnown RBP9.8□□□□□ -0.84
LRCH3-219ENST00000494069 RFC2P35250 354 aa9.8□□□□□ -0.84
LRCH3-219ENST00000494069 NAPAP54920 295 aa9.8□□□□□ -0.84
LRCH3-219ENST00000494069 RBL2Q08999 1139 aa9.8□□□□□ -0.84
LRCH3-219ENST00000494069 PTK7Q13308 1070 aa9.8□□□□□ -0.84
LRCH3-219ENST00000494069 NEDD9Q14511 834 aa9.8□□□□□ -0.84
LRCH3-219ENST00000494069 MBTPS1Q14703 1052 aa9.8□□□□□ -0.84
LRCH3-219ENST00000494069 ZNF618Q5T7W0 954 aa9.8□□□□□ -0.84
LRCH3-219ENST00000494069 XRRA1Q6P2D8 792 aa9.8□□□□□ -0.84
LRCH3-219ENST00000494069 NLRX1Q86UT6 975 aa9.8□□□□□ -0.84
LRCH3-219ENST00000494069 CYP2W1Q8TAV3 490 aa9.8□□□□□ -0.84
LRCH3-219ENST00000494069 CAGE1Q8TC20 777 aa9.8□□□□□ -0.84
LRCH3-219ENST00000494069 BRF1Q92994 677 aa9.8□□□□□ -0.84
LRCH3-219ENST00000494069 RNPEPQ9H4A4 650 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms