RNA–Protein interactions for RNA: ENST00000493613.5

NUDCD3-210, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-210ENST00000493613 LGR5O75473 907 aa11.86□□□□□ -0.51
NUDCD3-210ENST00000493613 LGALS2P05162 132 aa11.86□□□□□ -0.51
NUDCD3-210ENST00000493613 RSPH10BP0C881 870 aa11.86□□□□□ -0.51
NUDCD3-210ENST00000493613 THPOP40225 353 aa11.86□□□□□ -0.51
NUDCD3-210ENST00000493613 ANTXR2P58335 489 aa11.86□□□□□ -0.51
NUDCD3-210ENST00000493613 MRPS9P82933 396 aaKnown RBP11.86□□□□□ -0.51
NUDCD3-210ENST00000493613 FAM117BQ6P1L5 589 aa11.86□□□□□ -0.51
NUDCD3-210ENST00000493613 IGDCC4Q8TDY8 1250 aa11.86□□□□□ -0.51
NUDCD3-210ENST00000493613 GDPD5Q8WTR4 605 aa11.86□□□□□ -0.51
NUDCD3-210ENST00000493613 ATP6V0A1Q93050 837 aa11.86□□□□□ -0.51
NUDCD3-210ENST00000493613 NECAB3Q96P71 396 aaPredicted RBP11.86□□□□□ -0.51
NUDCD3-210ENST00000493613 INPP4AQ96PE3 977 aaPredicted RBP11.86□□□□□ -0.51
NUDCD3-210ENST00000493613 RAD9AQ99638 391 aa11.86□□□□□ -0.51
NUDCD3-210ENST00000493613 MTUS1Q9ULD2 1270 aa11.86□□□□□ -0.51
NUDCD3-210ENST00000493613 COG5Q9UP83 839 aa11.86□□□□□ -0.51
NUDCD3-210ENST00000493613 WDR81Q562E7 1941 aa11.86□□□□□ -0.51
NUDCD3-210ENST00000493613 COL4A6Q14031 1691 aa11.85□□□□□ -0.51
NUDCD3-210ENST00000493613 LINC01553A4QN01 128 aa11.85□□□□□ -0.51
NUDCD3-210ENST00000493613 SPATA31C2B4DYI2 1134 aa11.85□□□□□ -0.51
NUDCD3-210ENST00000493613 FIBPO43427 364 aa11.85□□□□□ -0.51
NUDCD3-210ENST00000493613 SMIM10L2AP0DMW4 78 aa11.85□□□□□ -0.51
NUDCD3-210ENST00000493613 SMIM10L2BP0DMW5 78 aa11.85□□□□□ -0.51
NUDCD3-210ENST00000493613 HOXC8P31273 242 aa11.85□□□□□ -0.51
NUDCD3-210ENST00000493613 ICAM3P32942 547 aa11.85□□□□□ -0.51
NUDCD3-210ENST00000493613 KIF5BP33176 963 aa11.85□□□□□ -0.51
NUDCD3-210ENST00000493613 NEDD9Q14511 834 aa11.85□□□□□ -0.51
NUDCD3-210ENST00000493613 CYFIP1Q7L576 1253 aa11.85□□□□□ -0.51
NUDCD3-210ENST00000493613 MB21D2Q8IYB1 491 aaPredicted RBP11.85□□□□□ -0.51
NUDCD3-210ENST00000493613 ZNF654Q8IZM8 581 aa11.85□□□□□ -0.51
NUDCD3-210ENST00000493613 DBF4BQ8NFT6 615 aa11.85□□□□□ -0.51
NUDCD3-210ENST00000493613 CTCFLQ8NI51 663 aaPredicted RBP11.85□□□□□ -0.51
NUDCD3-210ENST00000493613 SMARCC2Q8TAQ2 1214 aa11.85□□□□□ -0.51
NUDCD3-210ENST00000493613 MAP4K1Q92918 833 aa11.85□□□□□ -0.51
NUDCD3-210ENST00000493613 HLA-CQ95604 372 aa11.85□□□□□ -0.51
NUDCD3-210ENST00000493613 RRP36Q96EU6 259 aaKnown RBP11.85□□□□□ -0.51
NUDCD3-210ENST00000493613 TGS1Q96RS0 853 aaKnown RBP11.85□□□□□ -0.51
NUDCD3-210ENST00000493613 MAP3K14Q99558 947 aa11.85□□□□□ -0.51
NUDCD3-210ENST00000493613 MYL10Q9BUA6 226 aa11.85□□□□□ -0.51
NUDCD3-210ENST00000493613 SPZ1Q9BXG8 430 aa11.85□□□□□ -0.51
NUDCD3-210ENST00000493613 USP26Q9BXU7 913 aa11.85□□□□□ -0.51
NUDCD3-210ENST00000493613 RNPEPQ9H4A4 650 aa11.85□□□□□ -0.51
NUDCD3-210ENST00000493613 LY9Q9HBG7 655 aa11.85□□□□□ -0.51
NUDCD3-210ENST00000493613 RTEL1Q9NZ71 1219 aa11.85□□□□□ -0.51
NUDCD3-210ENST00000493613 SEC63Q9UGP8 760 aaKnown RBP11.85□□□□□ -0.51
NUDCD3-210ENST00000493613 RBM8AQ9Y5S9 174 aaKnown RBP11.85□□□□□ -0.51
NUDCD3-210ENST00000493613 BRWD1Q9NSI6 2320 aa11.85□□□□□ -0.51
NUDCD3-210ENST00000493613 TREHO43280 583 aa11.84□□□□□ -0.51
NUDCD3-210ENST00000493613 DDAH1O94760 285 aa11.84□□□□□ -0.51
NUDCD3-210ENST00000493613 AMHP03971 560 aa11.84□□□□□ -0.51
NUDCD3-210ENST00000493613 COL9A1P20849 921 aa11.84□□□□□ -0.51
NUDCD3-210ENST00000493613 ERVK-21P61565 698 aa11.84□□□□□ -0.51
NUDCD3-210ENST00000493613 PLEKHG4Q58EX7 1191 aa11.84□□□□□ -0.51
NUDCD3-210ENST00000493613 PCNX4Q63HM2 1172 aa11.84□□□□□ -0.51
NUDCD3-210ENST00000493613 USP17L6PQ6QN14 398 aa11.84□□□□□ -0.51
NUDCD3-210ENST00000493613 CASC1Q6TDU7 716 aa11.84□□□□□ -0.51
NUDCD3-210ENST00000493613 METTL7BQ6UX53 244 aa11.84□□□□□ -0.51
NUDCD3-210ENST00000493613 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.84□□□□□ -0.51
NUDCD3-210ENST00000493613 CUL5Q93034 780 aa11.84□□□□□ -0.51
NUDCD3-210ENST00000493613 GPR20Q99678 358 aa11.84□□□□□ -0.51
NUDCD3-210ENST00000493613 SUGCTQ9HAC7 445 aa11.84□□□□□ -0.51
NUDCD3-210ENST00000493613 LMCD1Q9NZU5 365 aa11.84□□□□□ -0.51
NUDCD3-210ENST00000493613 INSL6Q9Y581 213 aa11.84□□□□□ -0.51
NUDCD3-210ENST00000493613 C5orf42Q9H799 3197 aa11.84□□□□□ -0.51
NUDCD3-210ENST00000493613 MYH9P35579 1960 aaKnown RBP11.83□□□□□ -0.52
NUDCD3-210ENST00000493613 PIK3CDO00329 1044 aa11.83□□□□□ -0.52
NUDCD3-210ENST00000493613 MEIS2O14770 477 aa11.83□□□□□ -0.52
NUDCD3-210ENST00000493613 PRC1O43663 620 aa11.83□□□□□ -0.52
NUDCD3-210ENST00000493613 CAND2O75155 1236 aa11.83□□□□□ -0.52
NUDCD3-210ENST00000493613 CTSHP09668 335 aa11.83□□□□□ -0.52
NUDCD3-210ENST00000493613 GNAT1P11488 350 aa11.83□□□□□ -0.52
NUDCD3-210ENST00000493613 SMARCA1P28370 1054 aa11.83□□□□□ -0.52
NUDCD3-210ENST00000493613 SP4Q02446 784 aa11.83□□□□□ -0.52
NUDCD3-210ENST00000493613 SEMA3FQ13275 785 aa11.83□□□□□ -0.52
NUDCD3-210ENST00000493613 MKRN4PQ13434 485 aaPredicted RBP11.83□□□□□ -0.52
NUDCD3-210ENST00000493613 NFXL1Q6ZNB6 911 aa11.83□□□□□ -0.52
NUDCD3-210ENST00000493613 TRIM50Q86XT4 487 aa11.83□□□□□ -0.52
NUDCD3-210ENST00000493613 MYOCDQ8IZQ8 938 aa11.83□□□□□ -0.52
NUDCD3-210ENST00000493613 SETD4Q9NVD3 440 aa11.83□□□□□ -0.52
NUDCD3-210ENST00000493613 ZNF215Q9UL58 517 aaPredicted RBP11.83□□□□□ -0.52
NUDCD3-210ENST00000493613 CCDC69A6NI79 296 aa11.82□□□□□ -0.52
NUDCD3-210ENST00000493613 PLEKHA8P1O95397 391 aa11.82□□□□□ -0.52
NUDCD3-210ENST00000493613 MCM5P33992 734 aa11.82□□□□□ -0.52
NUDCD3-210ENST00000493613 HTRA4P83105 476 aaPredicted RBP11.82□□□□□ -0.52
NUDCD3-210ENST00000493613 UTP14CQ5TAP6 766 aaKnown RBP11.82□□□□□ -0.52
NUDCD3-210ENST00000493613 XRRA1Q6P2D8 792 aa11.82□□□□□ -0.52
NUDCD3-210ENST00000493613 NLRX1Q86UT6 975 aa11.82□□□□□ -0.52
NUDCD3-210ENST00000493613 CMTR1Q8N1G2 835 aaKnown RBP11.82□□□□□ -0.52
NUDCD3-210ENST00000493613 GIMAP8Q8ND71 665 aaPredicted RBP11.82□□□□□ -0.52
NUDCD3-210ENST00000493613 FBXO22Q8NEZ5 403 aa11.82□□□□□ -0.52
NUDCD3-210ENST00000493613 SEPT8Q92599 483 aa11.82□□□□□ -0.52
NUDCD3-210ENST00000493613 SENP7Q9BQF6 1050 aa11.82□□□□□ -0.52
NUDCD3-210ENST00000493613 LZTS2Q9BRK4 669 aa11.82□□□□□ -0.52
NUDCD3-210ENST00000493613 C17orf80Q9BSJ5 609 aa11.82□□□□□ -0.52
NUDCD3-210ENST00000493613 MTA3Q9BTC8 594 aa11.82□□□□□ -0.52
NUDCD3-210ENST00000493613 TELO2Q9Y4R8 837 aa11.82□□□□□ -0.52
NUDCD3-210ENST00000493613 EVPLQ92817 2033 aa11.82□□□□□ -0.52
NUDCD3-210ENST00000493613 SH2B2O14492 632 aaPredicted RBP11.81□□□□□ -0.52
NUDCD3-210ENST00000493613 CALM1P0DP23 149 aa11.81□□□□□ -0.52
NUDCD3-210ENST00000493613 CALM2P0DP24 149 aa11.81□□□□□ -0.52
NUDCD3-210ENST00000493613 CALM3P0DP25 149 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms