RNA–Protein interactions for RNA: ENST00000489544.1

SF1-218, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-218ENST00000489544 TGFB3P10600 412 aa9.4□□□□□ -0.9
SF1-218ENST00000489544 PDCP20941 246 aa9.4□□□□□ -0.9
SF1-218ENST00000489544 CYP3A7P24462 503 aa9.4□□□□□ -0.9
SF1-218ENST00000489544 RESTQ13127 1097 aa9.4□□□□□ -0.9
SF1-218ENST00000489544 FSCN1Q16658 493 aaKnown RBP9.4□□□□□ -0.9
SF1-218ENST00000489544 GNASQ5JWF2 1037 aa9.4□□□□□ -0.9
SF1-218ENST00000489544 CCSAPQ6IQ19 270 aaPredicted RBP9.4□□□□□ -0.9
SF1-218ENST00000489544 NIPA1Q7RTP0 329 aa9.4□□□□□ -0.9
SF1-218ENST00000489544 PAWRQ96IZ0 340 aaKnown RBP9.4□□□□□ -0.9
SF1-218ENST00000489544 SPATA33Q96N06 139 aa9.4□□□□□ -0.9
SF1-218ENST00000489544 MBOAT7Q96N66 472 aa9.4□□□□□ -0.9
SF1-218ENST00000489544 ZNF577Q9BSK1 485 aa9.4□□□□□ -0.9
SF1-218ENST00000489544 TMEM60Q9H2L4 133 aa9.4□□□□□ -0.9
SF1-218ENST00000489544 MLXIPQ9HAP2 919 aa9.4□□□□□ -0.9
SF1-218ENST00000489544 PCDHB6Q9Y5E3 794 aa9.4□□□□□ -0.9
SF1-218ENST00000489544 KIAA1217Q5T5P2 1943 aa9.4□□□□□ -0.9
SF1-218ENST00000489544 IPO5O00410 1097 aaKnown RBP9.39□□□□□ -0.91
SF1-218ENST00000489544 NKRFO15226 690 aaKnown RBP eCLIP9.39□□□□□ -0.91
SF1-218ENST00000489544 DHX15O43143 795 aaKnown RBP9.39□□□□□ -0.91
SF1-218ENST00000489544 CHMP2AO43633 222 aa9.39□□□□□ -0.91
SF1-218ENST00000489544 ASGR1P07306 291 aa9.39□□□□□ -0.91
SF1-218ENST00000489544 MMP3P08254 477 aa9.39□□□□□ -0.91
SF1-218ENST00000489544 MYL3P08590 195 aa9.39□□□□□ -0.91
SF1-218ENST00000489544 ZNF286BP0CG31 522 aa9.39□□□□□ -0.91
SF1-218ENST00000489544 ANP32AP39687 249 aaKnown RBP9.39□□□□□ -0.91
SF1-218ENST00000489544 CHMP4BP1P59074 171 aa9.39□□□□□ -0.91
SF1-218ENST00000489544 LAMC2Q13753 1193 aa9.39□□□□□ -0.91
SF1-218ENST00000489544 NEDD9Q14511 834 aa9.39□□□□□ -0.91
SF1-218ENST00000489544 FOXD4L6Q3SYB3 417 aaPredicted RBP9.39□□□□□ -0.91
SF1-218ENST00000489544 Q4G0T1 1027 aa9.39□□□□□ -0.91
SF1-218ENST00000489544 TTC38Q5R3I4 469 aa9.39□□□□□ -0.91
SF1-218ENST00000489544 PPP4R3AQ6IN85 833 aa9.39□□□□□ -0.91
SF1-218ENST00000489544 KCNV1Q6PIU1 500 aa9.39□□□□□ -0.91
SF1-218ENST00000489544 METTL7BQ6UX53 244 aa9.39□□□□□ -0.91
SF1-218ENST00000489544 CXCL17Q6UXB2 119 aa9.39□□□□□ -0.91
SF1-218ENST00000489544 FOXD4L3Q6VB84 417 aaPredicted RBP9.39□□□□□ -0.91
SF1-218ENST00000489544 RNF180Q86T96 592 aa9.39□□□□□ -0.91
SF1-218ENST00000489544 TRIM50Q86XT4 487 aa9.39□□□□□ -0.91
SF1-218ENST00000489544 ARRDC4Q8NCT1 418 aa9.39□□□□□ -0.91
SF1-218ENST00000489544 ETNPPLQ8TBG4 499 aa9.39□□□□□ -0.91
SF1-218ENST00000489544 HAS1Q92839 578 aa9.39□□□□□ -0.91
SF1-218ENST00000489544 CHAMP1Q96JM3 812 aa9.39□□□□□ -0.91
SF1-218ENST00000489544 CDHR1Q96JP9 859 aa9.39□□□□□ -0.91
SF1-218ENST00000489544 SENP7Q9BQF6 1050 aa9.39□□□□□ -0.91
SF1-218ENST00000489544 FTOQ9C0B1 505 aaKnown RBP eCLIP9.39□□□□□ -0.912e-6■■■■□ 23.1
SF1-218ENST00000489544 SPC25Q9HBM1 224 aa9.39□□□□□ -0.91
SF1-218ENST00000489544 PCDH10Q9P2E7 1040 aa9.39□□□□□ -0.91
SF1-218ENST00000489544 Q9Y3F1 56 aa9.39□□□□□ -0.91
SF1-218ENST00000489544 FRMPD3Q5JV73 1810 aa9.39□□□□□ -0.91
SF1-218ENST00000489544 DOCK5Q9H7D0 1870 aa9.38□□□□□ -0.91
SF1-218ENST00000489544 GSTTP1A0A1W2PQM5 241 aa9.38□□□□□ -0.91
SF1-218ENST00000489544 A6NJR5 290 aa9.38□□□□□ -0.91
SF1-218ENST00000489544 KBTBD13C9JR72 458 aa9.38□□□□□ -0.91
SF1-218ENST00000489544 RBAK-RBAKDNI3L0D1 243 aa9.38□□□□□ -0.91
SF1-218ENST00000489544 DNM1LO00429 736 aa9.38□□□□□ -0.91
SF1-218ENST00000489544 MAFGO15525 162 aa9.38□□□□□ -0.91
SF1-218ENST00000489544 SLC34A2O95436 690 aa9.38□□□□□ -0.91
SF1-218ENST00000489544 CST5P28325 142 aaPredicted RBP9.38□□□□□ -0.91
SF1-218ENST00000489544 ACLYP53396 1101 aa9.38□□□□□ -0.91
SF1-218ENST00000489544 ATN1P54259 1190 aaPredicted RBP9.38□□□□□ -0.91
SF1-218ENST00000489544 PSMC6P62333 389 aa9.38□□□□□ -0.91
SF1-218ENST00000489544 NKX3-2P78367 333 aa9.38□□□□□ -0.91
SF1-218ENST00000489544 SETQ01105 290 aaPredicted RBP9.38□□□□□ -0.91
SF1-218ENST00000489544 UTP14CQ5TAP6 766 aaKnown RBP9.38□□□□□ -0.91
SF1-218ENST00000489544 MOXD1Q6UVY6 613 aa9.38□□□□□ -0.91
SF1-218ENST00000489544 UBE2Q1Q7Z7E8 422 aa9.38□□□□□ -0.91
SF1-218ENST00000489544 PPTC7Q8NI37 304 aa9.38□□□□□ -0.91
SF1-218ENST00000489544 SLC5A5Q92911 643 aa9.38□□□□□ -0.91
SF1-218ENST00000489544 EMID1Q96A84 441 aaPredicted RBP9.38□□□□□ -0.91
SF1-218ENST00000489544 GPR20Q99678 358 aa9.38□□□□□ -0.91
SF1-218ENST00000489544 SDF4Q9BRK5 362 aa9.38□□□□□ -0.91
SF1-218ENST00000489544 SENP6Q9GZR1 1112 aaPredicted RBP9.38□□□□□ -0.91
SF1-218ENST00000489544 JPH1Q9HDC5 661 aaPredicted RBP9.38□□□□□ -0.91
SF1-218ENST00000489544 KCNMB3Q9NPA1 279 aa9.38□□□□□ -0.91
SF1-218ENST00000489544 SLC9A2Q9UBY0 812 aa9.38□□□□□ -0.91
SF1-218ENST00000489544 NOL7Q9UMY1 257 aaKnown RBP9.38□□□□□ -0.91
SF1-218ENST00000489544 ZDHHC9Q9Y397 364 aa9.38□□□□□ -0.91
SF1-218ENST00000489544 NFASCO94856 1347 aa9.37□□□□□ -0.91
SF1-218ENST00000489544 A0A1W2PQ45 241 aaPredicted RBP9.37□□□□□ -0.91
SF1-218ENST00000489544 A0A1W2PQY0 241 aa9.37□□□□□ -0.91
SF1-218ENST00000489544 NOP56O00567 594 aaKnown RBP9.37□□□□□ -0.91
SF1-218ENST00000489544 NEMFO60524 1076 aa9.37□□□□□ -0.91
SF1-218ENST00000489544 GAS7O60861 476 aa9.37□□□□□ -0.91
SF1-218ENST00000489544 PSMD10O75832 226 aa9.37□□□□□ -0.91
SF1-218ENST00000489544 ZSCAN22P10073 491 aaPredicted RBP9.37□□□□□ -0.91
SF1-218ENST00000489544 COL6A1P12109 1028 aa9.37□□□□□ -0.91
SF1-218ENST00000489544 GCFC2P16383 781 aaKnown RBP9.37□□□□□ -0.91
SF1-218ENST00000489544 CPT1AP50416 773 aa9.37□□□□□ -0.91
SF1-218ENST00000489544 ACTR2P61160 394 aa9.37□□□□□ -0.91
SF1-218ENST00000489544 PURAQ00577 322 aaKnown RBP9.37□□□□□ -0.91
SF1-218ENST00000489544 CEBPZQ03701 1054 aaKnown RBP9.37□□□□□ -0.91
SF1-218ENST00000489544 CALCRLQ16602 461 aa9.37□□□□□ -0.91
SF1-218ENST00000489544 LRCH2Q5VUJ6 765 aa9.37□□□□□ -0.91
SF1-218ENST00000489544 C4orf32Q8N8J7 132 aa9.37□□□□□ -0.91
SF1-218ENST00000489544 KAT2BQ92831 832 aa9.37□□□□□ -0.91
SF1-218ENST00000489544 VTI1AQ96AJ9 217 aa9.37□□□□□ -0.91
SF1-218ENST00000489544 MTMR9Q96QG7 549 aa9.37□□□□□ -0.91
SF1-218ENST00000489544 PCYT2Q99447 389 aa9.37□□□□□ -0.91
SF1-218ENST00000489544 UNC45AQ9H3U1 944 aa9.37□□□□□ -0.91
SF1-218ENST00000489544 C11orf49Q9H6J7 331 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms