RNA–Protein interactions for RNA: ENST00000488628.1

SUN1-233, Transcript of Sad1 and UNC84 domain containing 1, human

TSL 4

Gene SUN1, Length 626 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUN1-233	ENST00000488628	AFAP1L1	Q8TED9	768 aa		19.64	■□□□□ 0.73
SUN1-233	ENST00000488628	GPR20	Q99678	358 aa		19.64	■□□□□ 0.73
SUN1-233	ENST00000488628	FTO	Q9C0B1	505 aa	Known RBP eCLIP	19.64	■□□□□ 0.73
SUN1-233	ENST00000488628	RBM28	Q9NW13	759 aa	Known RBP	19.64	■□□□□ 0.73
SUN1-233	ENST00000488628	MSRA	Q9UJ68	235 aa		19.64	■□□□□ 0.73
SUN1-233	ENST00000488628		V9GY48	417 aa	Predicted RBP	19.64	■□□□□ 0.73
SUN1-233	ENST00000488628	GOLGA8A	A7E2F4	631 aa		19.63	■□□□□ 0.73
SUN1-233	ENST00000488628	GOLGA8B	A8MQT2	603 aa		19.63	■□□□□ 0.73
SUN1-233	ENST00000488628	SELP	P16109	830 aa		19.63	■□□□□ 0.73
SUN1-233	ENST00000488628	ATP2A2	P16615	1042 aa	Known RBP	19.63	■□□□□ 0.73
SUN1-233	ENST00000488628	ITGB5	P18084	799 aa		19.63	■□□□□ 0.73
SUN1-233	ENST00000488628	SP4	Q02446	784 aa		19.63	■□□□□ 0.73
SUN1-233	ENST00000488628	RBL2	Q08999	1139 aa		19.63	■□□□□ 0.73
SUN1-233	ENST00000488628	NEDD9	Q14511	834 aa		19.63	■□□□□ 0.73
SUN1-233	ENST00000488628	RAB30	Q15771	203 aa		19.63	■□□□□ 0.73
SUN1-233	ENST00000488628	XRRA1	Q6P2D8	792 aa		19.63	■□□□□ 0.73
SUN1-233	ENST00000488628	LRRC8D	Q7L1W4	858 aa		19.63	■□□□□ 0.73
SUN1-233	ENST00000488628	TRIM50	Q86XT4	487 aa		19.63	■□□□□ 0.73
SUN1-233	ENST00000488628	JAKMIP1	Q96N16	626 aa	Known RBP	19.63	■□□□□ 0.73
SUN1-233	ENST00000488628	PRDM12	Q9H4Q4	367 aa		19.63	■□□□□ 0.73
SUN1-233	ENST00000488628	PCDHA6	Q9UN73	950 aa		19.63	■□□□□ 0.73
SUN1-233	ENST00000488628	PCDHA8	Q9Y5H6	950 aa		19.63	■□□□□ 0.73
SUN1-233	ENST00000488628	VCAN	P13611	3396 aa		19.62	■□□□□ 0.73
SUN1-233	ENST00000488628		H3BRB1	525 aa		19.62	■□□□□ 0.73
SUN1-233	ENST00000488628	NOP56	O00567	594 aa	Known RBP	19.62	■□□□□ 0.73
SUN1-233	ENST00000488628	NBN	O60934	754 aa		19.62	■□□□□ 0.73
SUN1-233	ENST00000488628	APOBR	Q0VD83	1088 aa		19.62	■□□□□ 0.73
SUN1-233	ENST00000488628	PTK7	Q13308	1070 aa		19.62	■□□□□ 0.73
SUN1-233	ENST00000488628	ZNF618	Q5T7W0	954 aa		19.62	■□□□□ 0.73
SUN1-233	ENST00000488628		Q6ZUG5	572 aa		19.62	■□□□□ 0.73
SUN1-233	ENST00000488628	CCDC155	Q8N6L0	562 aa		19.62	■□□□□ 0.73
SUN1-233	ENST00000488628	TUT1	Q9H6E5	874 aa	Known RBP	19.62	■□□□□ 0.73
SUN1-233	ENST00000488628	SMIM10L2A	P0DMW4	78 aa		19.61	■□□□□ 0.73
SUN1-233	ENST00000488628	SMIM10L2B	P0DMW5	78 aa		19.61	■□□□□ 0.73
SUN1-233	ENST00000488628	KCNA2	P16389	499 aa		19.61	■□□□□ 0.73
SUN1-233	ENST00000488628	ADD1	P35611	737 aa	Known RBP	19.61	■□□□□ 0.73
SUN1-233	ENST00000488628	MBTPS1	Q14703	1052 aa		19.61	■□□□□ 0.73
SUN1-233	ENST00000488628	UTP14C	Q5TAP6	766 aa	Known RBP	19.61	■□□□□ 0.73
SUN1-233	ENST00000488628	NLRX1	Q86UT6	975 aa		19.61	■□□□□ 0.73
SUN1-233	ENST00000488628	PGBD1	Q96JS3	809 aa		19.61	■□□□□ 0.73
SUN1-233	ENST00000488628	SENP7	Q9BQF6	1050 aa		19.61	■□□□□ 0.73
SUN1-233	ENST00000488628	PKD2L1	Q9P0L9	805 aa		19.61	■□□□□ 0.73
SUN1-233	ENST00000488628	NAP1L2	Q9ULW6	460 aa	Predicted RBP	19.61	■□□□□ 0.73
SUN1-233	ENST00000488628	UBIAD1	Q9Y5Z9	338 aa		19.61	■□□□□ 0.73
SUN1-233	ENST00000488628	SPDYE3	A6NKU9	549 aa		19.6	■□□□□ 0.73
SUN1-233	ENST00000488628	STXBP3	O00186	592 aa		19.6	■□□□□ 0.73
SUN1-233	ENST00000488628	DLL1	O00548	723 aa		19.6	■□□□□ 0.73
SUN1-233	ENST00000488628	TREH	O43280	583 aa		19.6	■□□□□ 0.73
SUN1-233	ENST00000488628	HMGB1	P09429	215 aa	Known RBP	19.6	■□□□□ 0.73
SUN1-233	ENST00000488628	ACTN1	P12814	892 aa		19.6	■□□□□ 0.73
SUN1-233	ENST00000488628	HOXC8	P31273	242 aa		19.6	■□□□□ 0.73
SUN1-233	ENST00000488628	NAPA	P54920	295 aa		19.6	■□□□□ 0.73
SUN1-233	ENST00000488628	ADGRE1	Q14246	886 aa		19.6	■□□□□ 0.73
SUN1-233	ENST00000488628	SERINC5	Q86VE9	423 aa		19.6	■□□□□ 0.73
SUN1-233	ENST00000488628	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	19.6	■□□□□ 0.73
SUN1-233	ENST00000488628	USP38	Q8NB14	1042 aa		19.6	■□□□□ 0.73
SUN1-233	ENST00000488628	BRF1	Q92994	677 aa		19.6	■□□□□ 0.73
SUN1-233	ENST00000488628	GPRASP2	Q96D09	838 aa		19.6	■□□□□ 0.73
SUN1-233	ENST00000488628	USP26	Q9BXU7	913 aa		19.6	■□□□□ 0.73
SUN1-233	ENST00000488628	RNPEP	Q9H4A4	650 aa		19.6	■□□□□ 0.73
SUN1-233	ENST00000488628	SLC28A3	Q9HAS3	691 aa		19.6	■□□□□ 0.73
SUN1-233	ENST00000488628	TMEM260	Q9NX78	707 aa		19.6	■□□□□ 0.73
SUN1-233	ENST00000488628	PCDHA11	Q9Y5I1	949 aa		19.6	■□□□□ 0.73
SUN1-233	ENST00000488628	C17orf102	A2RUQ5	167 aa		19.59	■□□□□ 0.73
SUN1-233	ENST00000488628	ADAMTS3	O15072	1205 aa		19.59	■□□□□ 0.73
SUN1-233	ENST00000488628	CXCL10	P02778	98 aa		19.59	■□□□□ 0.73
SUN1-233	ENST00000488628	TMCO2	Q7Z6W1	182 aa	Predicted RBP	19.59	■□□□□ 0.73
SUN1-233	ENST00000488628	CYP2W1	Q8TAV3	490 aa		19.59	■□□□□ 0.73
SUN1-233	ENST00000488628	ATP6V0A1	Q93050	837 aa		19.59	■□□□□ 0.73
SUN1-233	ENST00000488628	OSBPL7	Q9BZF2	842 aa		19.59	■□□□□ 0.73
SUN1-233	ENST00000488628	RIC8A	Q9NPQ8	531 aa		19.59	■□□□□ 0.73
SUN1-233	ENST00000488628	SETD4	Q9NVD3	440 aa		19.59	■□□□□ 0.73
SUN1-233	ENST00000488628	GSTTP1	A0A1W2PQM5	241 aa		19.58	■□□□□ 0.72
SUN1-233	ENST00000488628	ARHGEF15	O94989	841 aa		19.58	■□□□□ 0.72
SUN1-233	ENST00000488628	RPS6KB1	P23443	525 aa		19.58	■□□□□ 0.72
SUN1-233	ENST00000488628	FGD1	P98174	961 aa		19.58	■□□□□ 0.72
SUN1-233	ENST00000488628	BLOC1S2	Q6QNY1	142 aa		19.58	■□□□□ 0.72
SUN1-233	ENST00000488628	JADE2	Q9NQC1	790 aa		19.58	■□□□□ 0.72
SUN1-233	ENST00000488628	BARHL2	Q9NY43	387 aa		19.58	■□□□□ 0.72
SUN1-233	ENST00000488628	MICAL3	Q7RTP6	2002 aa		19.58	■□□□□ 0.72
SUN1-233	ENST00000488628	SMCO2	A6NFE2	343 aa		19.57	■□□□□ 0.72
SUN1-233	ENST00000488628	CA3	P07451	260 aa		19.57	■□□□□ 0.72
SUN1-233	ENST00000488628	TCF7	P36402	384 aa	Predicted RBP	19.57	■□□□□ 0.72
SUN1-233	ENST00000488628	THPO	P40225	353 aa		19.57	■□□□□ 0.72
SUN1-233	ENST00000488628	METAP2	P50579	478 aa	Known RBP eCLIP	19.57	■□□□□ 0.72
SUN1-233	ENST00000488628	ADCY7	P51828	1080 aa		19.57	■□□□□ 0.72
SUN1-233	ENST00000488628	RCAN1	P53805	252 aa		19.57	■□□□□ 0.72
SUN1-233	ENST00000488628	WDR5	P61964	334 aa	Known RBP	19.57	■□□□□ 0.72
SUN1-233	ENST00000488628	MTMR1	Q13613	665 aa		19.57	■□□□□ 0.72
SUN1-233	ENST00000488628	PPP2R2D	Q66LE6	453 aa		19.57	■□□□□ 0.72
SUN1-233	ENST00000488628	HERC6	Q8IVU3	1022 aa		19.57	■□□□□ 0.72
SUN1-233	ENST00000488628	SLC9A7	Q96T83	725 aa		19.57	■□□□□ 0.72
SUN1-233	ENST00000488628	PPFIA3	O75145	1194 aa		19.56	■□□□□ 0.72
SUN1-233	ENST00000488628	BAIAP3	O94812	1187 aa		19.56	■□□□□ 0.72
SUN1-233	ENST00000488628	DEFB103A	P81534	67 aa		19.56	■□□□□ 0.72
SUN1-233	ENST00000488628	PPP1R18	Q6NYC8	613 aa		19.56	■□□□□ 0.72
SUN1-233	ENST00000488628	CNKSR3	Q6P9H4	555 aa		19.56	■□□□□ 0.72
SUN1-233	ENST00000488628	GIMAP8	Q8ND71	665 aa	Predicted RBP	19.56	■□□□□ 0.72
SUN1-233	ENST00000488628	PHOSPHO2	Q8TCD6	241 aa		19.56	■□□□□ 0.72
SUN1-233	ENST00000488628	MXRA8	Q9BRK3	442 aa		19.56	■□□□□ 0.72

Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms