RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 BRWD1Q9NSI6 2320 aa22.56■■□□□ 1.2
SMPDL3A-202ENST00000487215 TREHO43280 583 aa22.56■■□□□ 1.2
SMPDL3A-202ENST00000487215 LGALS2P05162 132 aa22.56■■□□□ 1.2
SMPDL3A-202ENST00000487215 SMIM10L2AP0DMW4 78 aa22.56■■□□□ 1.2
SMPDL3A-202ENST00000487215 SMIM10L2BP0DMW5 78 aa22.56■■□□□ 1.2
SMPDL3A-202ENST00000487215 EPC2Q52LR7 807 aa22.56■■□□□ 1.2
SMPDL3A-202ENST00000487215 CYB5R4Q7L1T6 521 aa22.56■■□□□ 1.2
SMPDL3A-202ENST00000487215 OSBPL7Q9BZF2 842 aa22.56■■□□□ 1.2
SMPDL3A-202ENST00000487215 BCAS3Q9H6U6 928 aa22.56■■□□□ 1.2
SMPDL3A-202ENST00000487215 GCOM1H8Y6P7 765 aaPredicted RBP22.55■■□□□ 1.2
SMPDL3A-202ENST00000487215 POLR2MP0CAP2 368 aa22.55■■□□□ 1.2
SMPDL3A-202ENST00000487215 NUCB1Q02818 461 aa22.55■■□□□ 1.2
SMPDL3A-202ENST00000487215 PTPROQ16827 1216 aa22.55■■□□□ 1.2
SMPDL3A-202ENST00000487215 PTCRAQ6ISU1 281 aaPredicted RBP22.55■■□□□ 1.2
SMPDL3A-202ENST00000487215 FCHSD1Q86WN1 690 aa22.55■■□□□ 1.2
SMPDL3A-202ENST00000487215 SEPT8Q92599 483 aa22.55■■□□□ 1.2
SMPDL3A-202ENST00000487215 SAMD11Q96NU1 681 aa22.55■■□□□ 1.2
SMPDL3A-202ENST00000487215 PIGSQ96S52 555 aa22.55■■□□□ 1.2
SMPDL3A-202ENST00000487215 IL25Q9H293 177 aa22.55■■□□□ 1.2
SMPDL3A-202ENST00000487215 RWDD1Q9H446 243 aaPredicted RBP22.55■■□□□ 1.2
SMPDL3A-202ENST00000487215 RNPEPQ9H4A4 650 aa22.55■■□□□ 1.2
SMPDL3A-202ENST00000487215 CTSHP09668 335 aa22.54■■□□□ 1.2
SMPDL3A-202ENST00000487215 TOP1MTQ969P6 601 aa22.54■■□□□ 1.2
SMPDL3A-202ENST00000487215 YME1L1Q96TA2 773 aa22.54■■□□□ 1.2
SMPDL3A-202ENST00000487215 RIOX1Q9H6W3 641 aa22.54■■□□□ 1.2
SMPDL3A-202ENST00000487215 COL4A6Q14031 1691 aa22.54■■□□□ 1.2
SMPDL3A-202ENST00000487215 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.53■■□□□ 1.2
SMPDL3A-202ENST00000487215 GRXCR2A6NFK2 248 aa22.53■■□□□ 1.2
SMPDL3A-202ENST00000487215 CAND2O75155 1236 aa22.53■■□□□ 1.2
SMPDL3A-202ENST00000487215 SSTR3P32745 418 aaPredicted RBP22.53■■□□□ 1.2
SMPDL3A-202ENST00000487215 GRM4Q14833 912 aa22.53■■□□□ 1.2
SMPDL3A-202ENST00000487215 TIGD5Q53EQ6 642 aa22.53■■□□□ 1.2
SMPDL3A-202ENST00000487215 NEK9Q8TD19 979 aa22.53■■□□□ 1.2
SMPDL3A-202ENST00000487215 H3BNC9 293 aa22.52■■□□□ 1.2
SMPDL3A-202ENST00000487215 H3BQ06 376 aaPredicted RBP22.52■■□□□ 1.2
SMPDL3A-202ENST00000487215 NOP56O00567 594 aaKnown RBP22.52■■□□□ 1.2
SMPDL3A-202ENST00000487215 CYTH3O43739 400 aa22.52■■□□□ 1.2
SMPDL3A-202ENST00000487215 UPP2O95045 317 aa22.52■■□□□ 1.2
SMPDL3A-202ENST00000487215 IGHDP01880 384 aa22.52■■□□□ 1.2
SMPDL3A-202ENST00000487215 MRPS9P82933 396 aaKnown RBP22.52■■□□□ 1.2
SMPDL3A-202ENST00000487215 TRAF1Q13077 416 aa22.52■■□□□ 1.2
SMPDL3A-202ENST00000487215 GPM6BQ13491 265 aa22.52■■□□□ 1.2
SMPDL3A-202ENST00000487215 BANK1Q8NDB2 785 aa22.52■■□□□ 1.2
SMPDL3A-202ENST00000487215 FRMPD4Q14CM0 1322 aa22.52■■□□□ 1.2
SMPDL3A-202ENST00000487215 ICAM3P32942 547 aa22.51■■□□□ 1.19
SMPDL3A-202ENST00000487215 SEMA3FQ13275 785 aa22.51■■□□□ 1.19
SMPDL3A-202ENST00000487215 AAMPQ13685 434 aa22.51■■□□□ 1.19
SMPDL3A-202ENST00000487215 PUS10Q3MIT2 529 aaKnown RBP22.51■■□□□ 1.19
SMPDL3A-202ENST00000487215 GNPTABQ3T906 1256 aa22.51■■□□□ 1.19
SMPDL3A-202ENST00000487215 TCEAL5Q5H9L2 206 aa22.51■■□□□ 1.19
SMPDL3A-202ENST00000487215 METTL7BQ6UX53 244 aa22.51■■□□□ 1.19
SMPDL3A-202ENST00000487215 TMEM192Q8IY95 271 aa22.51■■□□□ 1.19
SMPDL3A-202ENST00000487215 INPP4AQ96PE3 977 aaPredicted RBP22.51■■□□□ 1.19
SMPDL3A-202ENST00000487215 GPR20Q99678 358 aa22.51■■□□□ 1.19
SMPDL3A-202ENST00000487215 USP26Q9BXU7 913 aa22.51■■□□□ 1.19
SMPDL3A-202ENST00000487215 SETD4Q9NVD3 440 aa22.51■■□□□ 1.19
SMPDL3A-202ENST00000487215 PRR33A8MZF0 331 aa22.5■■□□□ 1.19
SMPDL3A-202ENST00000487215 SPATA31C2B4DYI2 1134 aa22.5■■□□□ 1.19
SMPDL3A-202ENST00000487215 NEDD9Q14511 834 aa22.5■■□□□ 1.19
SMPDL3A-202ENST00000487215 CYFIP1Q7L576 1253 aa22.5■■□□□ 1.19
SMPDL3A-202ENST00000487215 TRIM50Q86XT4 487 aa22.5■■□□□ 1.19
SMPDL3A-202ENST00000487215 IFIH1Q9BYX4 1025 aaKnown RBP22.5■■□□□ 1.19
SMPDL3A-202ENST00000487215 SENP2Q9HC62 589 aa22.5■■□□□ 1.19
SMPDL3A-202ENST00000487215 PNMA6FA0A0J9YX94 578 aa22.49■■□□□ 1.19
SMPDL3A-202ENST00000487215 STAM2O75886 525 aa22.49■■□□□ 1.19
SMPDL3A-202ENST00000487215 GNAT1P11488 350 aa22.49■■□□□ 1.19
SMPDL3A-202ENST00000487215 APBB2Q92870 758 aa22.49■■□□□ 1.19
SMPDL3A-202ENST00000487215 PABPC5Q96DU9 382 aaKnown RBP22.49■■□□□ 1.19
SMPDL3A-202ENST00000487215 TELO2Q9Y4R8 837 aa22.49■■□□□ 1.19
SMPDL3A-202ENST00000487215 FIBPO43427 364 aa22.48■■□□□ 1.19
SMPDL3A-202ENST00000487215 ADAM17P78536 824 aa22.48■■□□□ 1.19
SMPDL3A-202ENST00000487215 TRDNQ13061 729 aa22.48■■□□□ 1.19
SMPDL3A-202ENST00000487215 COL19A1Q14993 1142 aa22.48■■□□□ 1.19
SMPDL3A-202ENST00000487215 FAM26DQ5JW98 314 aa22.48■■□□□ 1.19
SMPDL3A-202ENST00000487215 NSUN3Q9H649 340 aaKnown RBP22.48■■□□□ 1.19
SMPDL3A-202ENST00000487215 RTEL1Q9NZ71 1219 aa22.48■■□□□ 1.19
SMPDL3A-202ENST00000487215 IFIT3O14879 490 aaKnown RBP22.47■■□□□ 1.19
SMPDL3A-202ENST00000487215 ALADP13716 330 aa22.47■■□□□ 1.19
SMPDL3A-202ENST00000487215 ARHGAP4P98171 946 aa22.47■■□□□ 1.19
SMPDL3A-202ENST00000487215 TROAPQ12815 778 aa22.47■■□□□ 1.19
SMPDL3A-202ENST00000487215 UTP14CQ5TAP6 766 aaKnown RBP22.47■■□□□ 1.19
SMPDL3A-202ENST00000487215 LMBR1Q8WVP7 490 aa22.47■■□□□ 1.19
SMPDL3A-202ENST00000487215 ZNF215Q9UL58 517 aaPredicted RBP22.47■■□□□ 1.19
SMPDL3A-202ENST00000487215 EP400NLQ6ZTU2 488 aa22.46■■□□□ 1.19
SMPDL3A-202ENST00000487215 IL17RAQ96F46 866 aa22.46■■□□□ 1.19
SMPDL3A-202ENST00000487215 SUPT16HQ9Y5B9 1047 aaKnown RBP22.46■■□□□ 1.19
SMPDL3A-202ENST00000487215 NLRC5Q86WI3 1866 aa22.45■■□□□ 1.19
SMPDL3A-202ENST00000487215 ERICH2A1L162 156 aa22.45■■□□□ 1.18
SMPDL3A-202ENST00000487215 CYP21A2P08686 494 aa22.45■■□□□ 1.18
SMPDL3A-202ENST00000487215 CTNNB1P35222 781 aa22.45■■□□□ 1.18
SMPDL3A-202ENST00000487215 SP4Q02446 784 aa22.45■■□□□ 1.18
SMPDL3A-202ENST00000487215 WTAPQ15007 396 aa22.45■■□□□ 1.18
SMPDL3A-202ENST00000487215 FIBCD1Q8N539 461 aa22.45■■□□□ 1.18
SMPDL3A-202ENST00000487215 PIBF1Q8WXW3 757 aa22.45■■□□□ 1.18
SMPDL3A-202ENST00000487215 CLDND1Q9NY35 253 aa22.45■■□□□ 1.18
SMPDL3A-202ENST00000487215 RALGAPA2Q2PPJ7 1873 aa22.45■■□□□ 1.18
SMPDL3A-202ENST00000487215 CHRNA1P02708 482 aa22.44■■□□□ 1.18
SMPDL3A-202ENST00000487215 LINC00271P0C7V0 271 aa22.44■■□□□ 1.18
SMPDL3A-202ENST00000487215 ZP2Q05996 745 aa22.44■■□□□ 1.18
SMPDL3A-202ENST00000487215 NRCAMQ92823 1304 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms