RNA–Protein interactions for RNA: ENST00000485985.1

LMBR1-217, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-217ENST00000485985 COG5Q9UP83 839 aa24.07■■□□□ 1.44
LMBR1-217ENST00000485985 RBAK-RBAKDNI3L0D1 243 aa24.06■■□□□ 1.44
LMBR1-217ENST00000485985 PARNO95453 639 aaKnown RBP24.06■■□□□ 1.44
LMBR1-217ENST00000485985 TGFB3P10600 412 aa24.06■■□□□ 1.44
LMBR1-217ENST00000485985 GRB10Q13322 594 aa24.06■■□□□ 1.44
LMBR1-217ENST00000485985 SPRED2Q7Z698 418 aa24.06■■□□□ 1.44
LMBR1-217ENST00000485985 C7orf31Q8N865 590 aa24.06■■□□□ 1.44
LMBR1-217ENST00000485985 KATNAL1Q9BW62 490 aa24.06■■□□□ 1.44
LMBR1-217ENST00000485985 hCG_1642624A0A1W2PR95 340 aa24.05■■□□□ 1.44
LMBR1-217ENST00000485985 PIK3CDO00329 1044 aa24.05■■□□□ 1.44
LMBR1-217ENST00000485985 LPXNO60711 386 aa24.05■■□□□ 1.44
LMBR1-217ENST00000485985 CXCL10P02778 98 aa24.05■■□□□ 1.44
LMBR1-217ENST00000485985 CALM1P0DP23 149 aa24.05■■□□□ 1.44
LMBR1-217ENST00000485985 CALM2P0DP24 149 aa24.05■■□□□ 1.44
LMBR1-217ENST00000485985 CALM3P0DP25 149 aa24.05■■□□□ 1.44
LMBR1-217ENST00000485985 GNAQP50148 359 aa24.05■■□□□ 1.44
LMBR1-217ENST00000485985 HIC1Q14526 733 aa24.05■■□□□ 1.44
LMBR1-217ENST00000485985 CNKSR3Q6P9H4 555 aa24.05■■□□□ 1.44
LMBR1-217ENST00000485985 TMTC3Q6ZXV5 915 aa24.05■■□□□ 1.44
LMBR1-217ENST00000485985 TMCO2Q7Z6W1 182 aaPredicted RBP24.05■■□□□ 1.44
LMBR1-217ENST00000485985 SGMS1Q86VZ5 419 aa24.05■■□□□ 1.44
LMBR1-217ENST00000485985 MICU3Q86XE3 530 aa24.05■■□□□ 1.44
LMBR1-217ENST00000485985 SLC12A7Q9Y666 1083 aa24.05■■□□□ 1.44
LMBR1-217ENST00000485985 XIRP2A4UGR9 3374 aa24.05■■□□□ 1.44
LMBR1-217ENST00000485985 MICAL3Q7RTP6 2002 aa24.05■■□□□ 1.44
LMBR1-217ENST00000485985 KAT6AQ92794 2004 aa24.05■■□□□ 1.44
LMBR1-217ENST00000485985 LCHNA4D1U4 455 aa24.04■■□□□ 1.44
LMBR1-217ENST00000485985 NBNO60934 754 aa24.04■■□□□ 1.44
LMBR1-217ENST00000485985 CDC45O75419 566 aa24.04■■□□□ 1.44
LMBR1-217ENST00000485985 CKBP12277 381 aa24.04■■□□□ 1.44
LMBR1-217ENST00000485985 ICAM3P32942 547 aa24.04■■□□□ 1.44
LMBR1-217ENST00000485985 SMARCC2Q8TAQ2 1214 aa24.04■■□□□ 1.44
LMBR1-217ENST00000485985 WNT8BQ93098 351 aa24.04■■□□□ 1.44
LMBR1-217ENST00000485985 TCEANC2Q96MN5 208 aa24.04■■□□□ 1.44
LMBR1-217ENST00000485985 C16orf70Q9BSU1 422 aa24.04■■□□□ 1.44
LMBR1-217ENST00000485985 ZBED2Q9BTP6 218 aa24.04■■□□□ 1.44
LMBR1-217ENST00000485985 RTEL1Q9NZ71 1219 aa24.04■■□□□ 1.44
LMBR1-217ENST00000485985 PPFIA4O75335 1185 aa24.03■■□□□ 1.44
LMBR1-217ENST00000485985 DEFB103AP81534 67 aa24.03■■□□□ 1.44
LMBR1-217ENST00000485985 ZNF200P98182 395 aaPredicted RBP24.03■■□□□ 1.44
LMBR1-217ENST00000485985 ADCK5Q3MIX3 580 aa24.03■■□□□ 1.44
LMBR1-217ENST00000485985 RNF20Q5VTR2 975 aa24.03■■□□□ 1.44
LMBR1-217ENST00000485985 PCNX4Q63HM2 1172 aa24.03■■□□□ 1.44
LMBR1-217ENST00000485985 APOA5Q6Q788 366 aa24.03■■□□□ 1.44
LMBR1-217ENST00000485985 RASEFQ8IZ41 740 aa24.03■■□□□ 1.44
LMBR1-217ENST00000485985 CCDC82Q8N4S0 544 aa24.03■■□□□ 1.44
LMBR1-217ENST00000485985 FANCBQ8NB91 859 aa24.03■■□□□ 1.44
LMBR1-217ENST00000485985 HLA-CQ95604 372 aa24.03■■□□□ 1.44
LMBR1-217ENST00000485985 MLXIPQ9HAP2 919 aa24.03■■□□□ 1.44
LMBR1-217ENST00000485985 SIP14410 1827 aa24.03■■□□□ 1.44
LMBR1-217ENST00000485985 COL4A4P53420 1690 aaPredicted RBP24.02■■□□□ 1.44
LMBR1-217ENST00000485985 ABHD14A-ACY1A0A1B0GW23 586 aa24.02■■□□□ 1.44
LMBR1-217ENST00000485985 SPATA31C2B4DYI2 1134 aa24.02■■□□□ 1.44
LMBR1-217ENST00000485985 STAM2O75886 525 aa24.02■■□□□ 1.44
LMBR1-217ENST00000485985 PTK7Q13308 1070 aa24.02■■□□□ 1.44
LMBR1-217ENST00000485985 TCTN1Q2MV58 587 aa24.02■■□□□ 1.44
LMBR1-217ENST00000485985 TRIM71Q2Q1W2 868 aaKnown RBP24.02■■□□□ 1.44
LMBR1-217ENST00000485985 GNPTABQ3T906 1256 aa24.02■■□□□ 1.44
LMBR1-217ENST00000485985 CUL5Q93034 780 aa24.02■■□□□ 1.44
LMBR1-217ENST00000485985 NEK1Q96PY6 1258 aa24.02■■□□□ 1.44
LMBR1-217ENST00000485985 C1QTNF1Q9BXJ1 281 aa24.02■■□□□ 1.44
LMBR1-217ENST00000485985 TELO2Q9Y4R8 837 aa24.02■■□□□ 1.44
LMBR1-217ENST00000485985 CNTNAP5Q8WYK1 1306 aa24.02■■□□□ 1.44
LMBR1-217ENST00000485985 FIBPO43427 364 aa24.01■■□□□ 1.43
LMBR1-217ENST00000485985 LGALS2P05162 132 aa24.01■■□□□ 1.43
LMBR1-217ENST00000485985 EXOSC10Q01780 885 aaKnown RBP24.01■■□□□ 1.43
LMBR1-217ENST00000485985 BRPF3Q9ULD4 1205 aa24.01■■□□□ 1.43
LMBR1-217ENST00000485985 GJB5O95377 273 aa24■■□□□ 1.43
LMBR1-217ENST00000485985 UBE2SQ16763 222 aa24■■□□□ 1.43
LMBR1-217ENST00000485985 TRAF7Q6Q0C0 670 aa24■■□□□ 1.43
LMBR1-217ENST00000485985 METTL7BQ6UX53 244 aa24■■□□□ 1.43
LMBR1-217ENST00000485985 CYFIP1Q7L576 1253 aa24■■□□□ 1.43
LMBR1-217ENST00000485985 RAD9AQ99638 391 aa24■■□□□ 1.43
LMBR1-217ENST00000485985 LMCD1Q9NZU5 365 aa24■■□□□ 1.43
LMBR1-217ENST00000485985 EFCAB14O75071 495 aa23.99■■□□□ 1.43
LMBR1-217ENST00000485985 HOXC8P31273 242 aa23.99■■□□□ 1.43
LMBR1-217ENST00000485985 IKBKEQ14164 716 aa23.99■■□□□ 1.43
LMBR1-217ENST00000485985 TSGA10IPQ3SY00 556 aa23.99■■□□□ 1.43
LMBR1-217ENST00000485985 ZNF618Q5T7W0 954 aa23.99■■□□□ 1.43
LMBR1-217ENST00000485985 GDPD5Q8WTR4 605 aa23.99■■□□□ 1.43
LMBR1-217ENST00000485985 PSTPIP2Q9H939 334 aa23.99■■□□□ 1.43
LMBR1-217ENST00000485985 H3BRB1 525 aa23.98■■□□□ 1.43
LMBR1-217ENST00000485985 NOP56O00567 594 aaKnown RBP23.98■■□□□ 1.43
LMBR1-217ENST00000485985 NEDD9Q14511 834 aa23.98■■□□□ 1.43
LMBR1-217ENST00000485985 MBTPS1Q14703 1052 aa23.98■■□□□ 1.43
LMBR1-217ENST00000485985 XRRA1Q6P2D8 792 aa23.98■■□□□ 1.43
LMBR1-217ENST00000485985 DHX32Q7L7V1 743 aaKnown RBP23.98■■□□□ 1.43
LMBR1-217ENST00000485985 HEATR3Q7Z4Q2 680 aa23.98■■□□□ 1.43
LMBR1-217ENST00000485985 TRIM50Q86XT4 487 aa23.98■■□□□ 1.43
LMBR1-217ENST00000485985 GPR20Q99678 358 aa23.98■■□□□ 1.43
LMBR1-217ENST00000485985 TUT1Q9H6E5 874 aaKnown RBP23.98■■□□□ 1.43
LMBR1-217ENST00000485985 SUGCTQ9HAC7 445 aa23.98■■□□□ 1.43
LMBR1-217ENST00000485985 BRWD1Q9NSI6 2320 aa23.98■■□□□ 1.43
LMBR1-217ENST00000485985 ERVK-21P61565 698 aa23.97■■□□□ 1.43
LMBR1-217ENST00000485985 FUT2Q10981 343 aa23.97■■□□□ 1.43
LMBR1-217ENST00000485985 WWC2Q6AWC2 1192 aa23.97■■□□□ 1.43
LMBR1-217ENST00000485985 TYW1BQ6NUM6 668 aa23.97■■□□□ 1.43
LMBR1-217ENST00000485985 SERINC5Q86VE9 423 aa23.97■■□□□ 1.43
LMBR1-217ENST00000485985 TGS1Q96RS0 853 aaKnown RBP23.97■■□□□ 1.43
LMBR1-217ENST00000485985 MTUS1Q9ULD2 1270 aa23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms