RNA–Protein interactions for RNA: ENST00000479958.6

COMMD3-212, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 1,443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-212ENST00000479958 STYK1Q6J9G0 422 aa7.96□□□□□ -1.13
COMMD3-212ENST00000479958 KCNT2Q6UVM3 1135 aa7.96□□□□□ -1.13
COMMD3-212ENST00000479958 FRMD5Q7Z6J6 570 aa7.96□□□□□ -1.13
COMMD3-212ENST00000479958 FAM26EQ8N5C1 309 aa7.96□□□□□ -1.13
COMMD3-212ENST00000479958 ZBTB38Q8NAP3 1195 aaPredicted RBP7.96□□□□□ -1.13
COMMD3-212ENST00000479958 SYT8Q8NBV8 401 aa7.96□□□□□ -1.13
COMMD3-212ENST00000479958 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.96□□□□□ -1.136e-6■■■□□ 15.1
COMMD3-212ENST00000479958 ALG1Q9BT22 464 aa7.96□□□□□ -1.13
COMMD3-212ENST00000479958 SPATA6Q9NWH7 488 aaPredicted RBP7.96□□□□□ -1.13
COMMD3-212ENST00000479958 RTEL1Q9NZ71 1219 aa7.96□□□□□ -1.13
COMMD3-212ENST00000479958 MYOTQ9UBF9 498 aa7.96□□□□□ -1.13
COMMD3-212ENST00000479958 PFDN2Q9UHV9 154 aa7.96□□□□□ -1.13
COMMD3-212ENST00000479958 KIF27Q86VH2 1401 aa7.96□□□□□ -1.14
COMMD3-212ENST00000479958 A0A1B0GTL3 188 aa7.95□□□□□ -1.14
COMMD3-212ENST00000479958 STAT5AP42229 794 aa7.95□□□□□ -1.14
COMMD3-212ENST00000479958 SPATA25Q9BR10 227 aa7.95□□□□□ -1.14
COMMD3-212ENST00000479958 CDIP1Q9H305 208 aa7.95□□□□□ -1.14
COMMD3-212ENST00000479958 DTLQ9NZJ0 730 aa7.95□□□□□ -1.14
COMMD3-212ENST00000479958 TNIKQ9UKE5 1360 aa7.95□□□□□ -1.14
COMMD3-212ENST00000479958 TRBV23-1A0A0A0MS06 115 aa7.95□□□□□ -1.14
COMMD3-212ENST00000479958 A0A0G2JLL6 359 aaPredicted RBP7.95□□□□□ -1.14
COMMD3-212ENST00000479958 FAM47E-STBD1D6RA91 191 aa7.95□□□□□ -1.14
COMMD3-212ENST00000479958 AQP7O14520 342 aa7.95□□□□□ -1.14
COMMD3-212ENST00000479958 CYP7B1O75881 506 aa7.95□□□□□ -1.14
COMMD3-212ENST00000479958 APPP05067 770 aa7.95□□□□□ -1.14
COMMD3-212ENST00000479958 GRK2P25098 689 aa7.95□□□□□ -1.14
COMMD3-212ENST00000479958 GRK3P35626 688 aa7.95□□□□□ -1.14
COMMD3-212ENST00000479958 DLX2Q07687 328 aaPredicted RBP7.95□□□□□ -1.14
COMMD3-212ENST00000479958 NTRK3Q16288 839 aa7.95□□□□□ -1.14
COMMD3-212ENST00000479958 LONRF2Q1L5Z9 754 aa7.95□□□□□ -1.14
COMMD3-212ENST00000479958 NT5DC1Q5TFE4 455 aa7.95□□□□□ -1.14
COMMD3-212ENST00000479958 YOD1Q5VVQ6 348 aaPredicted RBP7.95□□□□□ -1.14
COMMD3-212ENST00000479958 ARRDC4Q8NCT1 418 aa7.95□□□□□ -1.14
COMMD3-212ENST00000479958 TEPSINQ96N21 525 aa7.95□□□□□ -1.14
COMMD3-212ENST00000479958 GOLGA3Q08378 1498 aa7.94□□□□□ -1.14
COMMD3-212ENST00000479958 KIF21BO75037 1637 aa7.94□□□□□ -1.14
COMMD3-212ENST00000479958 B8ZZF3 427 aa7.94□□□□□ -1.14
COMMD3-212ENST00000479958 GNAT1P11488 350 aa7.94□□□□□ -1.14
COMMD3-212ENST00000479958 NAT1P18440 290 aa7.94□□□□□ -1.14
COMMD3-212ENST00000479958 RPL13P26373 211 aaKnown RBP7.94□□□□□ -1.14
COMMD3-212ENST00000479958 GJA9P57773 515 aa7.94□□□□□ -1.14
COMMD3-212ENST00000479958 CR1LQ2VPA4 569 aa7.94□□□□□ -1.14
COMMD3-212ENST00000479958 ZC3H12BQ5HYM0 836 aaKnown RBP7.94□□□□□ -1.14
COMMD3-212ENST00000479958 LCE4AQ5TA78 99 aa7.94□□□□□ -1.14
COMMD3-212ENST00000479958 PIP4K2CQ8TBX8 421 aa7.94□□□□□ -1.14
COMMD3-212ENST00000479958 KCNJ15Q99712 375 aa7.94□□□□□ -1.14
COMMD3-212ENST00000479958 PRXQ9BXM0 1461 aa7.94□□□□□ -1.14
COMMD3-212ENST00000479958 TDRD9Q8NDG6 1382 aaKnown RBP7.93□□□□□ -1.14
COMMD3-212ENST00000479958 KDM2BQ8NHM5 1336 aa7.93□□□□□ -1.14
COMMD3-212ENST00000479958 ADAMTS20P59510 1910 aa7.93□□□□□ -1.14
COMMD3-212ENST00000479958 MRC2Q9UBG0 1479 aa7.93□□□□□ -1.14
COMMD3-212ENST00000479958 BLACEA4D250 179 aa7.93□□□□□ -1.14
COMMD3-212ENST00000479958 FOXD2O60548 495 aaPredicted RBP7.93□□□□□ -1.14
COMMD3-212ENST00000479958 SYN1P17600 705 aa7.93□□□□□ -1.14
COMMD3-212ENST00000479958 THBS2P35442 1172 aa7.93□□□□□ -1.14
COMMD3-212ENST00000479958 RANGAP1P46060 587 aaPredicted RBP7.93□□□□□ -1.14
COMMD3-212ENST00000479958 ITGA1P56199 1179 aa7.93□□□□□ -1.14
COMMD3-212ENST00000479958 SUMO1P63165 101 aaKnown RBP7.93□□□□□ -1.14
COMMD3-212ENST00000479958 KIAA2012Q0VF49 1180 aa7.93□□□□□ -1.14
COMMD3-212ENST00000479958 OTOP3Q7RTS5 596 aa7.93□□□□□ -1.14
COMMD3-212ENST00000479958 MAMDC2Q7Z304 686 aaPredicted RBP7.93□□□□□ -1.14
COMMD3-212ENST00000479958 STK32CQ86UX6 486 aa7.93□□□□□ -1.14
COMMD3-212ENST00000479958 FAM124AQ86V42 546 aa7.93□□□□□ -1.14
COMMD3-212ENST00000479958 CXorf38Q8TB03 319 aa7.93□□□□□ -1.14
COMMD3-212ENST00000479958 PTPRN2Q92932 1015 aa7.93□□□□□ -1.14
COMMD3-212ENST00000479958 CLIC6Q96NY7 704 aa7.93□□□□□ -1.14
COMMD3-212ENST00000479958 ASH2LQ9UBL3 628 aa7.93□□□□□ -1.14
COMMD3-212ENST00000479958 ABCA10Q8WWZ4 1543 aa7.92□□□□□ -1.14
COMMD3-212ENST00000479958 SOD2P04179 222 aa7.92□□□□□ -1.14
COMMD3-212ENST00000479958 TEPPQ6URK8 271 aa7.92□□□□□ -1.14
COMMD3-212ENST00000479958 MKL1Q969V6 931 aa7.92□□□□□ -1.14
COMMD3-212ENST00000479958 DEPDC7Q96QD5 511 aa7.92□□□□□ -1.14
COMMD3-212ENST00000479958 PPARGC1AQ9UBK2 798 aaKnown RBP7.92□□□□□ -1.14
COMMD3-212ENST00000479958 CEP162Q5TB80 1403 aa7.92□□□□□ -1.14
COMMD3-212ENST00000479958 PRRG2O14669 202 aa7.91□□□□□ -1.14
COMMD3-212ENST00000479958 SLC27A2O14975 620 aa7.91□□□□□ -1.14
COMMD3-212ENST00000479958 ADCY3O60266 1144 aa7.91□□□□□ -1.14
COMMD3-212ENST00000479958 UBXN11Q5T124 520 aa7.91□□□□□ -1.14
COMMD3-212ENST00000479958 ZFYVE27Q5T4F4 411 aa7.91□□□□□ -1.14
COMMD3-212ENST00000479958 WRNIP1Q96S55 665 aa7.91□□□□□ -1.14
COMMD3-212ENST00000479958 SRPK1Q96SB4 655 aaKnown RBP7.91□□□□□ -1.14
COMMD3-212ENST00000479958 TMEM209Q96SK2 561 aa7.91□□□□□ -1.14
COMMD3-212ENST00000479958 DHRS4Q9BTZ2 278 aa7.91□□□□□ -1.14
COMMD3-212ENST00000479958 HSPBP1Q9NZL4 362 aa7.91□□□□□ -1.14
COMMD3-212ENST00000479958 ERCC6Q03468 1493 aa7.9□□□□□ -1.14
COMMD3-212ENST00000479958 NOBOXO60393 691 aa7.9□□□□□ -1.14
COMMD3-212ENST00000479958 LRG1P02750 347 aa7.9□□□□□ -1.14
COMMD3-212ENST00000479958 COL6A2P12110 1019 aa7.9□□□□□ -1.14
COMMD3-212ENST00000479958 GABREP78334 506 aa7.9□□□□□ -1.14
COMMD3-212ENST00000479958 PAK1Q13153 545 aa7.9□□□□□ -1.14
COMMD3-212ENST00000479958 SERINC3Q13530 473 aa7.9□□□□□ -1.14
COMMD3-212ENST00000479958 FAM209AQ5JX71 171 aa7.9□□□□□ -1.14
COMMD3-212ENST00000479958 TTLL11Q8NHH1 800 aa7.9□□□□□ -1.14
COMMD3-212ENST00000479958 ADAMTS17Q8TE56 1095 aa7.9□□□□□ -1.14
COMMD3-212ENST00000479958 SYT3Q9BQG1 590 aa7.9□□□□□ -1.14
COMMD3-212ENST00000479958 DSEQ9UL01 958 aa7.9□□□□□ -1.14
COMMD3-212ENST00000479958 GSTA4O15217 222 aa7.89□□□□□ -1.15
COMMD3-212ENST00000479958 DIAPH1O60610 1272 aaKnown RBP7.89□□□□□ -1.15
COMMD3-212ENST00000479958 FAM153BP0C7A2 387 aa7.89□□□□□ -1.15
COMMD3-212ENST00000479958 FAM26FQ5R3K3 315 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms