RNA–Protein interactions for RNA: ENST00000478911.1

SUPT20H-215, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 3

Gene SUPT20H, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-215ENST00000478911 HMGB1P09429 215 aaKnown RBP4.69□□□□□ -1.66
SUPT20H-215ENST00000478911 CDKN1CP49918 316 aaPredicted RBP4.69□□□□□ -1.66
SUPT20H-215ENST00000478911 DNM2P50570 870 aa4.69□□□□□ -1.66
SUPT20H-215ENST00000478911 MECP2P51608 486 aaKnown RBP4.69□□□□□ -1.66
SUPT20H-215ENST00000478911 ST5P78524 1137 aa4.69□□□□□ -1.66
SUPT20H-215ENST00000478911 NFKB2Q00653 900 aa4.69□□□□□ -1.66
SUPT20H-215ENST00000478911 DHCR24Q15392 516 aa4.69□□□□□ -1.66
SUPT20H-215ENST00000478911 SKOR2Q2VWA4 1001 aaPredicted RBP4.69□□□□□ -1.66
SUPT20H-215ENST00000478911 HABP4Q5JVS0 413 aaKnown RBP4.69□□□□□ -1.66
SUPT20H-215ENST00000478911 MROH9Q5TGP6 573 aa4.69□□□□□ -1.66
SUPT20H-215ENST00000478911 DDX46Q7L014 1031 aaKnown RBP4.69□□□□□ -1.66
SUPT20H-215ENST00000478911 OVCH1Q7RTY7 1134 aa4.69□□□□□ -1.66
SUPT20H-215ENST00000478911 DDX42Q86XP3 938 aaKnown RBP eCLIP4.69□□□□□ -1.66
SUPT20H-215ENST00000478911 KIF18BQ86Y91 864 aa4.69□□□□□ -1.66
SUPT20H-215ENST00000478911 LILRA2Q8N149 483 aa4.69□□□□□ -1.66
SUPT20H-215ENST00000478911 CHST14Q8NCH0 376 aa4.69□□□□□ -1.66
SUPT20H-215ENST00000478911 USP33Q8TEY7 942 aa4.69□□□□□ -1.66
SUPT20H-215ENST00000478911 SHISA4Q96DD7 197 aa4.69□□□□□ -1.66
SUPT20H-215ENST00000478911 EPB41L1Q9H4G0 881 aa4.69□□□□□ -1.66
SUPT20H-215ENST00000478911 GPR160Q9UJ42 338 aa4.69□□□□□ -1.66
SUPT20H-215ENST00000478911 SMG5Q9UPR3 1016 aaKnown RBP4.69□□□□□ -1.66
SUPT20H-215ENST00000478911 COA3Q9Y2R0 106 aaPredicted RBP4.69□□□□□ -1.66
SUPT20H-215ENST00000478911 ZNF891A8MT65 544 aaPredicted RBP4.68□□□□□ -1.66
SUPT20H-215ENST00000478911 ZNF561-AS1K7EIQ3 104 aa4.68□□□□□ -1.66
SUPT20H-215ENST00000478911 TRAF5O00463 557 aa4.68□□□□□ -1.66
SUPT20H-215ENST00000478911 GLI4P10075 376 aa4.68□□□□□ -1.66
SUPT20H-215ENST00000478911 GNAT1P11488 350 aa4.68□□□□□ -1.66
SUPT20H-215ENST00000478911 RAC2P15153 192 aa4.68□□□□□ -1.66
SUPT20H-215ENST00000478911 GLDCP23378 1020 aa4.68□□□□□ -1.66
SUPT20H-215ENST00000478911 LINC00310P59036 64 aa4.68□□□□□ -1.66
SUPT20H-215ENST00000478911 LACTBP83111 547 aaPredicted RBP4.68□□□□□ -1.66
SUPT20H-215ENST00000478911 CYP4F8P98187 520 aa4.68□□□□□ -1.66
SUPT20H-215ENST00000478911 STRN3Q13033 797 aa4.68□□□□□ -1.66
SUPT20H-215ENST00000478911 SNX17Q15036 470 aa4.68□□□□□ -1.66
SUPT20H-215ENST00000478911 OTOP3Q7RTS5 596 aa4.68□□□□□ -1.66
SUPT20H-215ENST00000478911 CISD2Q8N5K1 135 aaKnown RBP4.68□□□□□ -1.66
SUPT20H-215ENST00000478911 PRPF38AQ8NAV1 312 aaKnown RBP4.68□□□□□ -1.66
SUPT20H-215ENST00000478911 PANK1Q8TE04 598 aa4.68□□□□□ -1.66
SUPT20H-215ENST00000478911 MYLIPQ8WY64 445 aa4.68□□□□□ -1.66
SUPT20H-215ENST00000478911 SMURF1Q9HCE7 757 aa4.68□□□□□ -1.66
SUPT20H-215ENST00000478911 PARD6AQ9NPB6 346 aa4.68□□□□□ -1.66
SUPT20H-215ENST00000478911 CATSPERZQ9NTU4 200 aa4.68□□□□□ -1.66
SUPT20H-215ENST00000478911 B4GALT6Q9UBX8 382 aa4.68□□□□□ -1.66
SUPT20H-215ENST00000478911 TCRBV5S4A2TA0A5A2 114 aa4.67□□□□□ -1.66
SUPT20H-215ENST00000478911 NKRFO15226 690 aaKnown RBP eCLIP4.67□□□□□ -1.66
SUPT20H-215ENST00000478911 DGKIO75912 1065 aa4.67□□□□□ -1.66
SUPT20H-215ENST00000478911 F2P00734 622 aa4.67□□□□□ -1.66
SUPT20H-215ENST00000478911 NTRK1P04629 796 aa4.67□□□□□ -1.66
SUPT20H-215ENST00000478911 AMY2AP04746 511 aa4.67□□□□□ -1.66
SUPT20H-215ENST00000478911 COL6A2P12110 1019 aa4.67□□□□□ -1.66
SUPT20H-215ENST00000478911 PNLIPP16233 465 aa4.67□□□□□ -1.66
SUPT20H-215ENST00000478911 PDE6AP16499 860 aa4.67□□□□□ -1.66
SUPT20H-215ENST00000478911 BPIP17213 487 aa4.67□□□□□ -1.66
SUPT20H-215ENST00000478911 AMY2BP19961 511 aa4.67□□□□□ -1.66
SUPT20H-215ENST00000478911 CDK11BP21127 795 aaKnown RBP4.67□□□□□ -1.66
SUPT20H-215ENST00000478911 GALK1P51570 392 aa4.67□□□□□ -1.66
SUPT20H-215ENST00000478911 JAM2P57087 298 aa4.67□□□□□ -1.66
SUPT20H-215ENST00000478911 DSG1Q02413 1049 aa4.67□□□□□ -1.66
SUPT20H-215ENST00000478911 SPIRE1Q08AE8 756 aa4.67□□□□□ -1.66
SUPT20H-215ENST00000478911 GPR19Q15760 415 aa4.67□□□□□ -1.66
SUPT20H-215ENST00000478911 CRY1Q16526 586 aa4.67□□□□□ -1.66
SUPT20H-215ENST00000478911 EMC4Q5J8M3 183 aa4.67□□□□□ -1.66
SUPT20H-215ENST00000478911 BICRALQ6AI39 1079 aa4.67□□□□□ -1.66
SUPT20H-215ENST00000478911 WWC2Q6AWC2 1192 aa4.67□□□□□ -1.66
SUPT20H-215ENST00000478911 DBX2Q6ZNG2 339 aa4.67□□□□□ -1.66
SUPT20H-215ENST00000478911 OTOP1Q7RTM1 612 aa4.67□□□□□ -1.66
SUPT20H-215ENST00000478911 NXPE1Q8N323 547 aa4.67□□□□□ -1.66
SUPT20H-215ENST00000478911 NETO2Q8NC67 525 aa4.67□□□□□ -1.66
SUPT20H-215ENST00000478911 OR2W6PQ8NHA6 318 aa4.67□□□□□ -1.66
SUPT20H-215ENST00000478911 PIP4K2CQ8TBX8 421 aa4.67□□□□□ -1.66
SUPT20H-215ENST00000478911 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.67□□□□□ -1.66
SUPT20H-215ENST00000478911 RNF32Q9H0A6 362 aa4.67□□□□□ -1.66
SUPT20H-215ENST00000478911 IRF2BPLQ9H1B7 796 aa4.67□□□□□ -1.66
SUPT20H-215ENST00000478911 ZCCHC4Q9H5U6 513 aa4.67□□□□□ -1.66
SUPT20H-215ENST00000478911 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.67□□□□□ -1.66
SUPT20H-215ENST00000478911 TNFRSF12AQ9NP84 129 aa4.67□□□□□ -1.66
SUPT20H-215ENST00000478911 CABP5Q9NP86 173 aa4.67□□□□□ -1.66
SUPT20H-215ENST00000478911 SLC6A20Q9NP91 592 aa4.67□□□□□ -1.66
SUPT20H-215ENST00000478911 CRTAC1Q9NQ79 661 aa4.67□□□□□ -1.66
SUPT20H-215ENST00000478911 MCM8Q9UJA3 840 aa4.67□□□□□ -1.66
SUPT20H-215ENST00000478911 A0A1W2PQJ5 194 aa4.66□□□□□ -1.66
SUPT20H-215ENST00000478911 SRGAP3O43295 1099 aa4.66□□□□□ -1.66
SUPT20H-215ENST00000478911 FOXD2O60548 495 aaPredicted RBP4.66□□□□□ -1.66
SUPT20H-215ENST00000478911 CPEP16870 476 aa4.66□□□□□ -1.66
SUPT20H-215ENST00000478911 KRT15P19012 456 aa4.66□□□□□ -1.66
SUPT20H-215ENST00000478911 SLC6A11P48066 632 aa4.66□□□□□ -1.66
SUPT20H-215ENST00000478911 SCNN1BP51168 640 aa4.66□□□□□ -1.66
SUPT20H-215ENST00000478911 ARHGAP36Q6ZRI8 547 aa4.66□□□□□ -1.66
SUPT20H-215ENST00000478911 CABP7Q86V35 215 aa4.66□□□□□ -1.66
SUPT20H-215ENST00000478911 OSTM1Q86WC4 334 aa4.66□□□□□ -1.66
SUPT20H-215ENST00000478911 SIRT2Q8IXJ6 389 aa4.66□□□□□ -1.66
SUPT20H-215ENST00000478911 C2orf69Q8N8R5 385 aa4.66□□□□□ -1.66
SUPT20H-215ENST00000478911 SMC1BQ8NDV3 1235 aa4.66□□□□□ -1.66
SUPT20H-215ENST00000478911 ATL2Q8NHH9 583 aa4.66□□□□□ -1.66
SUPT20H-215ENST00000478911 ABHD4Q8TB40 342 aa4.66□□□□□ -1.66
SUPT20H-215ENST00000478911 SH3RF2Q8TEC5 729 aa4.66□□□□□ -1.66
SUPT20H-215ENST00000478911 STAG1Q8WVM7 1258 aa4.66□□□□□ -1.66
SUPT20H-215ENST00000478911 KCNN1Q92952 543 aa4.66□□□□□ -1.66
SUPT20H-215ENST00000478911 IFT22Q9H7X7 185 aa4.66□□□□□ -1.66
SUPT20H-215ENST00000478911 DDX56Q9NY93 547 aaKnown RBP4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms