RNA–Protein interactions for RNA: ENST00000478911.1

SUPT20H-215, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 3

Gene SUPT20H, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-215ENST00000478911 AEBP2Q6ZN18 517 aaPredicted RBP19.57■□□□□ 0.72
SUPT20H-215ENST00000478911 CHIC1Q5VXU3 224 aa18.34■□□□□ 0.53
SUPT20H-215ENST00000478911 SENP3Q9H4L4 574 aaPredicted RBP16.77■□□□□ 0.28
SUPT20H-215ENST00000478911 PHF23Q9BUL5 403 aaPredicted RBP16.49■□□□□ 0.23
SUPT20H-215ENST00000478911 FOXD1Q16676 465 aa15.64■□□□□ 0.09
SUPT20H-215ENST00000478911 POTEDQ86YR6 584 aa14.86□□□□□ -0.03
SUPT20H-215ENST00000478911 MSH5O43196 834 aa14.76□□□□□ -0.05
SUPT20H-215ENST00000478911 PIAS4Q8N2W9 510 aaPredicted RBP14.58□□□□□ -0.08
SUPT20H-215ENST00000478911 PLPPR3Q6T4P5 718 aa14.54□□□□□ -0.08
SUPT20H-215ENST00000478911 PPP6R1Q9UPN7 881 aa14.4□□□□□ -0.1
SUPT20H-215ENST00000478911 ADRA2BP18089 450 aa14.37□□□□□ -0.11
SUPT20H-215ENST00000478911 MAPK8IP2Q13387 824 aaPredicted RBP13.27□□□□□ -0.29
SUPT20H-215ENST00000478911 DMRT2Q9Y5R5 561 aa13.24□□□□□ -0.29
SUPT20H-215ENST00000478911 SCAF1Q9H7N4 1312 aaKnown RBP13.15□□□□□ -0.3
SUPT20H-215ENST00000478911 CACNB1Q02641 598 aaPredicted RBP12.85□□□□□ -0.35
SUPT20H-215ENST00000478911 DCAF8L1A6NGE4 600 aa12.76□□□□□ -0.37
SUPT20H-215ENST00000478911 PPP4R3CPQ6ZMV5 832 aa12.71□□□□□ -0.37
SUPT20H-215ENST00000478911 HOXD11P31277 338 aaPredicted RBP12.64□□□□□ -0.39
SUPT20H-215ENST00000478911 RNF39Q9H2S5 420 aa12.56□□□□□ -0.4
SUPT20H-215ENST00000478911 CNKSR2Q8WXI2 1034 aa12.53□□□□□ -0.4
SUPT20H-215ENST00000478911 RNF216Q9NWF9 866 aaPredicted RBP12.48□□□□□ -0.41
SUPT20H-215ENST00000478911 C1QBPQ07021 282 aaKnown RBP12.37□□□□□ -0.43
SUPT20H-215ENST00000478911 DNAJC5BQ9UF47 199 aa12.25□□□□□ -0.45
SUPT20H-215ENST00000478911 NCBP3Q53F19 620 aaKnown RBP12.15□□□□□ -0.46
SUPT20H-215ENST00000478911 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.08□□□□□ -0.48
SUPT20H-215ENST00000478911 NPM3O75607 178 aaKnown RBP11.95□□□□□ -0.5
SUPT20H-215ENST00000478911 U3KPZ7 1027 aaPredicted RBP11.77□□□□□ -0.53
SUPT20H-215ENST00000478911 CAPN15O75808 1086 aa11.7□□□□□ -0.54
SUPT20H-215ENST00000478911 SPINK5Q9NQ38 1064 aaPredicted RBP11.69□□□□□ -0.54
SUPT20H-215ENST00000478911 DSG3P32926 999 aa11.67□□□□□ -0.54
SUPT20H-215ENST00000478911 POTEHQ6S545 545 aa11.6□□□□□ -0.55
SUPT20H-215ENST00000478911 KCNA4P22459 653 aa11.49□□□□□ -0.57
SUPT20H-215ENST00000478911 SLC4A2P04920 1241 aa11.48□□□□□ -0.57
SUPT20H-215ENST00000478911 TRHP20396 242 aaPredicted RBP11.45□□□□□ -0.58
SUPT20H-215ENST00000478911 APLP2Q06481 763 aa11.44□□□□□ -0.58
SUPT20H-215ENST00000478911 ZNF219Q9P2Y4 722 aaPredicted RBP11.41□□□□□ -0.58
SUPT20H-215ENST00000478911 ABCB7O75027 752 aa11.4□□□□□ -0.58
SUPT20H-215ENST00000478911 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.36□□□□□ -0.59
SUPT20H-215ENST00000478911 HNRNPUL2Q1KMD3 747 aaKnown RBP11.36□□□□□ -0.59
SUPT20H-215ENST00000478911 SAMD1Q6SPF0 538 aaPredicted RBP11.28□□□□□ -0.6
SUPT20H-215ENST00000478911 RBM42Q9BTD8 480 aaKnown RBP11.17□□□□□ -0.62
SUPT20H-215ENST00000478911 MYCNP04198 464 aaPredicted RBP11.08□□□□□ -0.64
SUPT20H-215ENST00000478911 POLA2Q14181 598 aa11.05□□□□□ -0.64
SUPT20H-215ENST00000478911 CHRDL2Q6WN34 429 aa11.02□□□□□ -0.65
SUPT20H-215ENST00000478911 AKT1S1Q96B36 256 aa10.84□□□□□ -0.67
SUPT20H-215ENST00000478911 ZBTB12Q9Y330 459 aaPredicted RBP10.83□□□□□ -0.68
SUPT20H-215ENST00000478911 FOXD4L1Q9NU39 408 aa10.82□□□□□ -0.68
SUPT20H-215ENST00000478911 ATF5Q9Y2D1 282 aaPredicted RBP10.82□□□□□ -0.68
SUPT20H-215ENST00000478911 SLC4A1APQ9BWU0 796 aaKnown RBP10.81□□□□□ -0.68
SUPT20H-215ENST00000478911 REM2Q8IYK8 340 aaPredicted RBP10.74□□□□□ -0.69
SUPT20H-215ENST00000478911 SP7Q8TDD2 431 aaPredicted RBP10.74□□□□□ -0.69
SUPT20H-215ENST00000478911 OSCARQ8IYS5 282 aa10.73□□□□□ -0.69
SUPT20H-215ENST00000478911 PIP4P2Q8N4L2 257 aa10.69□□□□□ -0.7
SUPT20H-215ENST00000478911 EHMT2Q96KQ7 1210 aa10.64□□□□□ -0.71
SUPT20H-215ENST00000478911 PITPNM1O00562 1244 aa10.63□□□□□ -0.71
SUPT20H-215ENST00000478911 HAX1O00165 279 aa10.59□□□□□ -0.71
SUPT20H-215ENST00000478911 FXR2P51116 673 aaKnown RBP eCLIP10.57□□□□□ -0.72
SUPT20H-215ENST00000478911 ZBTB22O15209 634 aa10.54□□□□□ -0.72
SUPT20H-215ENST00000478911 ATXN8OSP0DMR3 200 aa10.5□□□□□ -0.73
SUPT20H-215ENST00000478911 SPDYE2BA6NHP3 402 aa10.46□□□□□ -0.73
SUPT20H-215ENST00000478911 SPDYE6P0CI01 402 aa10.46□□□□□ -0.73
SUPT20H-215ENST00000478911 FBLN2P98095 1184 aa10.46□□□□□ -0.73
SUPT20H-215ENST00000478911 SPDYE2Q495Y8 402 aa10.46□□□□□ -0.73
SUPT20H-215ENST00000478911 CSRNP3Q8WYN3 585 aa10.41□□□□□ -0.74
SUPT20H-215ENST00000478911 EVX2Q03828 476 aa10.4□□□□□ -0.74
SUPT20H-215ENST00000478911 PRKAR2AP13861 404 aaKnown RBP10.36□□□□□ -0.75
SUPT20H-215ENST00000478911 SPDYE1Q8NFV5 336 aaPredicted RBP10.36□□□□□ -0.75
SUPT20H-215ENST00000478911 CLEC11AQ9Y240 323 aa10.36□□□□□ -0.75
SUPT20H-215ENST00000478911 MKRN4PQ13434 485 aaPredicted RBP10.31□□□□□ -0.76
SUPT20H-215ENST00000478911 ZNF692Q9BU19 519 aaPredicted RBP10.3□□□□□ -0.76
SUPT20H-215ENST00000478911 SSUH2Q9Y2M2 353 aa10.28□□□□□ -0.76
SUPT20H-215ENST00000478911 C19orf67A6NJJ6 358 aa10.25□□□□□ -0.77
SUPT20H-215ENST00000478911 CHADLQ6NUI6 762 aa10.18□□□□□ -0.78
SUPT20H-215ENST00000478911 GABBR2O75899 941 aa10.17□□□□□ -0.78
SUPT20H-215ENST00000478911 PRR29P0C7W0 189 aa10.14□□□□□ -0.79
SUPT20H-215ENST00000478911 PABPN1Q86U42 306 aaKnown RBP eCLIP10.14□□□□□ -0.79
SUPT20H-215ENST00000478911 LHX8Q68G74 356 aa10.08□□□□□ -0.8
SUPT20H-215ENST00000478911 CD44P16070 742 aaKnown RBP10.01□□□□□ -0.81
SUPT20H-215ENST00000478911 FARP1Q9Y4F1 1045 aaPredicted RBP10□□□□□ -0.81
SUPT20H-215ENST00000478911 POTEIP0CG38 1075 aa9.94□□□□□ -0.82
SUPT20H-215ENST00000478911 CLCN6P51797 869 aa9.92□□□□□ -0.82
SUPT20H-215ENST00000478911 DCBLD2Q96PD2 775 aa9.86□□□□□ -0.83
SUPT20H-215ENST00000478911 ZNF579Q8NAF0 562 aaKnown RBP9.84□□□□□ -0.83
SUPT20H-215ENST00000478911 ZRANB1Q9UGI0 708 aa9.83□□□□□ -0.84
SUPT20H-215ENST00000478911 CREBZFQ9NS37 354 aa9.81□□□□□ -0.84
SUPT20H-215ENST00000478911 STAG3Q9UJ98 1225 aa9.81□□□□□ -0.84
SUPT20H-215ENST00000478911 GALR2O43603 387 aaPredicted RBP9.74□□□□□ -0.85
SUPT20H-215ENST00000478911 SPDYE4A6NLX3 237 aa9.71□□□□□ -0.86
SUPT20H-215ENST00000478911 PAK3O75914 559 aaPredicted RBP9.71□□□□□ -0.86
SUPT20H-215ENST00000478911 PHF12Q96QT6 1004 aa9.68□□□□□ -0.86
SUPT20H-215ENST00000478911 PLSCR2Q9NRY7 297 aa9.68□□□□□ -0.86
SUPT20H-215ENST00000478911 NPM1P06748 294 aaKnown RBP eCLIP9.65□□□□□ -0.86
SUPT20H-215ENST00000478911 OTUD5Q96G74 571 aa9.63□□□□□ -0.87
SUPT20H-215ENST00000478911 POTEB2H3BUK9 544 aa9.6□□□□□ -0.87
SUPT20H-215ENST00000478911 MNX1P50219 401 aaPredicted RBP9.59□□□□□ -0.87
SUPT20H-215ENST00000478911 PELP1Q8IZL8 1130 aaKnown RBP9.56□□□□□ -0.88
SUPT20H-215ENST00000478911 MS4A3Q96HJ5 214 aa9.53□□□□□ -0.88
SUPT20H-215ENST00000478911 POTEMA6NI47 508 aa9.51□□□□□ -0.89
SUPT20H-215ENST00000478911 METRNQ9UJH8 293 aa9.51□□□□□ -0.89
SUPT20H-215ENST00000478911 ASTLQ6HA08 431 aaPredicted RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms