RNA–Protein interactions for RNA: ENST00000467319.1

MSH5-212, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-212ENST00000467319 ARP10275 920 aa12.57□□□□□ -0.4
MSH5-212ENST00000467319 FOSBP53539 338 aa12.57□□□□□ -0.4
MSH5-212ENST00000467319 TRIM29Q14134 588 aa12.57□□□□□ -0.4
MSH5-212ENST00000467319 INF2Q27J81 1249 aa12.57□□□□□ -0.4
MSH5-212ENST00000467319 BRDTQ58F21 947 aaPredicted RBP12.57□□□□□ -0.4
MSH5-212ENST00000467319 SLC39A5Q6ZMH5 540 aa12.57□□□□□ -0.4
MSH5-212ENST00000467319 PLA2G4DQ86XP0 818 aa12.57□□□□□ -0.4
MSH5-212ENST00000467319 SPATA33Q96N06 139 aa12.57□□□□□ -0.4
MSH5-212ENST00000467319 MTG1Q9BT17 334 aaPredicted RBP12.57□□□□□ -0.4
MSH5-212ENST00000467319 STARD7Q9NQZ5 370 aa12.57□□□□□ -0.4
MSH5-212ENST00000467319 TELO2Q9Y4R8 837 aa12.57□□□□□ -0.4
MSH5-212ENST00000467319 A0A0U1RQG5 324 aaPredicted RBP12.56□□□□□ -0.4
MSH5-212ENST00000467319 CCDC194A0A1B0GVG4 234 aa12.56□□□□□ -0.4
MSH5-212ENST00000467319 BTBD18B2RXH4 712 aa12.56□□□□□ -0.4
MSH5-212ENST00000467319 DHX15O43143 795 aaKnown RBP12.56□□□□□ -0.4
MSH5-212ENST00000467319 TDP2O95551 362 aa12.56□□□□□ -0.4
MSH5-212ENST00000467319 GJB2P29033 226 aa12.56□□□□□ -0.4
MSH5-212ENST00000467319 CDK7P50613 346 aa12.56□□□□□ -0.4
MSH5-212ENST00000467319 ATN1P54259 1190 aaPredicted RBP12.56□□□□□ -0.4
MSH5-212ENST00000467319 RTP1P59025 263 aa12.56□□□□□ -0.4
MSH5-212ENST00000467319 GUCY1B3Q02153 619 aa12.56□□□□□ -0.4
MSH5-212ENST00000467319 DGKDQ16760 1214 aa12.56□□□□□ -0.4
MSH5-212ENST00000467319 TRIM60Q495X7 471 aa12.56□□□□□ -0.4
MSH5-212ENST00000467319 Q4G0T1 1027 aa12.56□□□□□ -0.4
MSH5-212ENST00000467319 PRR16Q569H4 304 aa12.56□□□□□ -0.4
MSH5-212ENST00000467319 PIK3AP1Q6ZUJ8 805 aa12.56□□□□□ -0.4
MSH5-212ENST00000467319 CYFIP1Q7L576 1253 aa12.56□□□□□ -0.4
MSH5-212ENST00000467319 ANKRD33Q7Z3H0 272 aa12.56□□□□□ -0.4
MSH5-212ENST00000467319 NEK8Q86SG6 692 aa12.56□□□□□ -0.4
MSH5-212ENST00000467319 FAM184AQ8NB25 1140 aa12.56□□□□□ -0.4
MSH5-212ENST00000467319 KAT2BQ92831 832 aa12.56□□□□□ -0.4
MSH5-212ENST00000467319 INTS4Q96HW7 963 aaKnown RBP12.56□□□□□ -0.4
MSH5-212ENST00000467319 GPR20Q99678 358 aa12.56□□□□□ -0.4
MSH5-212ENST00000467319 JPH1Q9HDC5 661 aaPredicted RBP12.56□□□□□ -0.4
MSH5-212ENST00000467319 KIF3AQ9Y496 699 aa12.56□□□□□ -0.4
MSH5-212ENST00000467319 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.56□□□□□ -0.4
MSH5-212ENST00000467319 HAS3O00219 553 aa12.55□□□□□ -0.4
MSH5-212ENST00000467319 IPO5O00410 1097 aaKnown RBP12.55□□□□□ -0.4
MSH5-212ENST00000467319 SLC37A4O43826 429 aa12.55□□□□□ -0.4
MSH5-212ENST00000467319 SORBS3O60504 671 aa12.55□□□□□ -0.4
MSH5-212ENST00000467319 PPFIA4O75335 1185 aa12.55□□□□□ -0.4
MSH5-212ENST00000467319 CCNE2O96020 404 aa12.55□□□□□ -0.4
MSH5-212ENST00000467319 LGALS2P05162 132 aa12.55□□□□□ -0.4
MSH5-212ENST00000467319 MYL3P08590 195 aa12.55□□□□□ -0.4
MSH5-212ENST00000467319 ZNF286BP0CG31 522 aa12.55□□□□□ -0.4
MSH5-212ENST00000467319 GCFC2P16383 781 aaKnown RBP12.55□□□□□ -0.4
MSH5-212ENST00000467319 ZNF76P36508 570 aa12.55□□□□□ -0.4
MSH5-212ENST00000467319 PPP4R3AQ6IN85 833 aa12.55□□□□□ -0.4
MSH5-212ENST00000467319 ETNPPLQ8TBG4 499 aa12.55□□□□□ -0.4
MSH5-212ENST00000467319 SLC5A5Q92911 643 aa12.55□□□□□ -0.4
MSH5-212ENST00000467319 C16orf70Q9BSU1 422 aa12.55□□□□□ -0.4
MSH5-212ENST00000467319 FOXP1Q9H334 677 aaPredicted RBP12.55□□□□□ -0.4
MSH5-212ENST00000467319 MLXIPQ9HAP2 919 aa12.55□□□□□ -0.4
MSH5-212ENST00000467319 KCNMB3Q9NPA1 279 aa12.55□□□□□ -0.4
MSH5-212ENST00000467319 PKD2L1Q9P0L9 805 aa12.55□□□□□ -0.4
MSH5-212ENST00000467319 SMC3Q9UQE7 1217 aa12.55□□□□□ -0.4
MSH5-212ENST00000467319 KIF28PB7ZC32 967 aa12.54□□□□□ -0.4
MSH5-212ENST00000467319 ARVCFO00192 962 aa12.54□□□□□ -0.4
MSH5-212ENST00000467319 NOP56O00567 594 aaKnown RBP12.54□□□□□ -0.4
MSH5-212ENST00000467319 WNT7AO00755 349 aa12.54□□□□□ -0.4
MSH5-212ENST00000467319 MSH4O15457 936 aa12.54□□□□□ -0.4
MSH5-212ENST00000467319 U2AF2P26368 475 aaKnown RBP eCLIP12.54□□□□□ -0.42e-6■□□□□ 8.1
MSH5-212ENST00000467319 PSMC6P62333 389 aa12.54□□□□□ -0.4
MSH5-212ENST00000467319 SAFBQ15424 915 aaKnown RBP eCLIP12.54□□□□□ -0.4
MSH5-212ENST00000467319 SESTD1Q86VW0 696 aa12.54□□□□□ -0.4
MSH5-212ENST00000467319 TRIM50Q86XT4 487 aa12.54□□□□□ -0.4
MSH5-212ENST00000467319 FAM126BQ8IXS8 530 aa12.54□□□□□ -0.4
MSH5-212ENST00000467319 TOX2Q96NM4 488 aa12.54□□□□□ -0.4
MSH5-212ENST00000467319 SDF4Q9BRK5 362 aa12.54□□□□□ -0.4
MSH5-212ENST00000467319 SEZ6LQ9BYH1 1024 aa12.54□□□□□ -0.4
MSH5-212ENST00000467319 PDLIM7Q9NR12 457 aa12.54□□□□□ -0.4
MSH5-212ENST00000467319 SLC9A2Q9UBY0 812 aa12.54□□□□□ -0.4
MSH5-212ENST00000467319 MROH7Q68CQ1 1323 aa12.54□□□□□ -0.4
MSH5-212ENST00000467319 EMSYQ7Z589 1322 aa12.54□□□□□ -0.4
MSH5-212ENST00000467319 GSTTP1A0A1W2PQM5 241 aa12.53□□□□□ -0.4
MSH5-212ENST00000467319 EVI5O60447 810 aa12.53□□□□□ -0.4
MSH5-212ENST00000467319 LGR5O75473 907 aa12.53□□□□□ -0.4
MSH5-212ENST00000467319 CD4P01730 458 aa12.53□□□□□ -0.4
MSH5-212ENST00000467319 HOXC8P31273 242 aa12.53□□□□□ -0.4
MSH5-212ENST00000467319 ACTR2P61160 394 aa12.53□□□□□ -0.4
MSH5-212ENST00000467319 TLE2Q04725 743 aa12.53□□□□□ -0.4
MSH5-212ENST00000467319 ITGA7Q13683 1181 aa12.53□□□□□ -0.4
MSH5-212ENST00000467319 LETM2Q2VYF4 491 aa12.53□□□□□ -0.4
MSH5-212ENST00000467319 NFRKBQ6P4R8 1299 aa12.53□□□□□ -0.4
MSH5-212ENST00000467319 B3GNT9Q6UX72 402 aa12.53□□□□□ -0.4
MSH5-212ENST00000467319 NOSTRINQ8IVI9 506 aa12.53□□□□□ -0.4
MSH5-212ENST00000467319 C7orf61Q8IZ16 206 aa12.53□□□□□ -0.4
MSH5-212ENST00000467319 PCYT2Q99447 389 aa12.53□□□□□ -0.4
MSH5-212ENST00000467319 RIT2Q99578 217 aa12.53□□□□□ -0.4
MSH5-212ENST00000467319 NAP1L4Q99733 375 aaKnown RBP12.53□□□□□ -0.4
MSH5-212ENST00000467319 ZNF577Q9BSK1 485 aa12.53□□□□□ -0.4
MSH5-212ENST00000467319 KATNAL1Q9BW62 490 aa12.53□□□□□ -0.4
MSH5-212ENST00000467319 TBC1D22BQ9NU19 505 aa12.53□□□□□ -0.4
MSH5-212ENST00000467319 DDX25Q9UHL0 483 aaKnown RBP12.53□□□□□ -0.4
MSH5-212ENST00000467319 TBX21Q9UL17 535 aa12.53□□□□□ -0.4
MSH5-212ENST00000467319 ATP11BQ9Y2G3 1177 aa12.53□□□□□ -0.4
MSH5-212ENST00000467319 TANC1Q9C0D5 1861 aa12.53□□□□□ -0.4
MSH5-212ENST00000467319 IGKV6D-21A0A0A0MT36 114 aa12.52□□□□□ -0.41
MSH5-212ENST00000467319 PQBP1O60828 265 aaKnown RBP12.52□□□□□ -0.41
MSH5-212ENST00000467319 PSMD10O75832 226 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms