RNA–Protein interactions for RNA: ENST00000465721.1

CNOT4-208, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 4

Gene CNOT4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-208ENST00000465721 ZNF213O14771 459 aa13.7□□□□□ -0.22
CNOT4-208ENST00000465721 MYCLP12524 364 aaPredicted RBP13.7□□□□□ -0.22
CNOT4-208ENST00000465721 ALADP13716 330 aa13.7□□□□□ -0.22
CNOT4-208ENST00000465721 MFAP1P55081 439 aaKnown RBP13.7□□□□□ -0.22
CNOT4-208ENST00000465721 ZP2Q05996 745 aa13.7□□□□□ -0.22
CNOT4-208ENST00000465721 PGM5Q15124 567 aa13.7□□□□□ -0.22
CNOT4-208ENST00000465721 PTPROQ16827 1216 aa13.7□□□□□ -0.22
CNOT4-208ENST00000465721 PUS10Q3MIT2 529 aaKnown RBP13.7□□□□□ -0.22
CNOT4-208ENST00000465721 TCEAL5Q5H9L2 206 aa13.7□□□□□ -0.22
CNOT4-208ENST00000465721 KCNV1Q6PIU1 500 aa13.7□□□□□ -0.22
CNOT4-208ENST00000465721 VSIG10LQ86VR7 867 aa13.7□□□□□ -0.22
CNOT4-208ENST00000465721 STAG2Q8N3U4 1231 aa13.7□□□□□ -0.22
CNOT4-208ENST00000465721 BANK1Q8NDB2 785 aa13.7□□□□□ -0.22
CNOT4-208ENST00000465721 PABPC5Q96DU9 382 aaKnown RBP13.7□□□□□ -0.22
CNOT4-208ENST00000465721 MTMR8Q96EF0 704 aa13.7□□□□□ -0.22
CNOT4-208ENST00000465721 YME1L1Q96TA2 773 aa13.7□□□□□ -0.22
CNOT4-208ENST00000465721 AMNQ9BXJ7 453 aa13.7□□□□□ -0.22
CNOT4-208ENST00000465721 VAT1LQ9HCJ6 419 aa13.7□□□□□ -0.22
CNOT4-208ENST00000465721 CTNNA3Q9UI47 895 aa13.7□□□□□ -0.22
CNOT4-208ENST00000465721 PLXNA4Q9HCM2 1894 aa13.7□□□□□ -0.22
CNOT4-208ENST00000465721 C17orf102A2RUQ5 167 aa13.69□□□□□ -0.22
CNOT4-208ENST00000465721 TRIM6-TRIM34B2RNG4 842 aa13.69□□□□□ -0.22
CNOT4-208ENST00000465721 TREHO43280 583 aa13.69□□□□□ -0.22
CNOT4-208ENST00000465721 CAND2O75155 1236 aa13.69□□□□□ -0.22
CNOT4-208ENST00000465721 LGALS2P05162 132 aa13.69□□□□□ -0.22
CNOT4-208ENST00000465721 CTSHP09668 335 aa13.69□□□□□ -0.22
CNOT4-208ENST00000465721 SMIM10L2AP0DMW4 78 aa13.69□□□□□ -0.22
CNOT4-208ENST00000465721 SMIM10L2BP0DMW5 78 aa13.69□□□□□ -0.22
CNOT4-208ENST00000465721 SDSP20132 328 aa13.69□□□□□ -0.22
CNOT4-208ENST00000465721 HOXA13P31271 388 aaPredicted RBP13.69□□□□□ -0.22
CNOT4-208ENST00000465721 GPM6BQ13491 265 aa13.69□□□□□ -0.22
CNOT4-208ENST00000465721 HDAC1Q13547 482 aaPredicted RBP13.69□□□□□ -0.22
CNOT4-208ENST00000465721 SLC35G1Q2M3R5 365 aa13.69□□□□□ -0.22
CNOT4-208ENST00000465721 ALYREFQ86V81 257 aaKnown RBP13.69□□□□□ -0.22
CNOT4-208ENST00000465721 SEPT8Q92599 483 aa13.69□□□□□ -0.22
CNOT4-208ENST00000465721 ATP6V0A1Q93050 837 aa13.69□□□□□ -0.22
CNOT4-208ENST00000465721 TOP1MTQ969P6 601 aa13.69□□□□□ -0.22
CNOT4-208ENST00000465721 MAP3K20Q9NYL2 800 aaKnown RBP13.69□□□□□ -0.22
CNOT4-208ENST00000465721 ZSWIM5Q9P217 1185 aa13.69□□□□□ -0.22
CNOT4-208ENST00000465721 CFAP54Q96N23 3096 aa13.69□□□□□ -0.22
CNOT4-208ENST00000465721 FRMPD4Q14CM0 1322 aa13.68□□□□□ -0.22
CNOT4-208ENST00000465721 POTEB3A0JP26 581 aa13.68□□□□□ -0.22
CNOT4-208ENST00000465721 C19orf67A6NJJ6 358 aa13.68□□□□□ -0.22
CNOT4-208ENST00000465721 H3BRB1 525 aa13.68□□□□□ -0.22
CNOT4-208ENST00000465721 DCXO43602 365 aa13.68□□□□□ -0.22
CNOT4-208ENST00000465721 LINC00271P0C7V0 271 aa13.68□□□□□ -0.22
CNOT4-208ENST00000465721 TGFB3P10600 412 aa13.68□□□□□ -0.22
CNOT4-208ENST00000465721 POTEBQ6S5H4 581 aa13.68□□□□□ -0.22
CNOT4-208ENST00000465721 TMEM192Q8IY95 271 aa13.68□□□□□ -0.22
CNOT4-208ENST00000465721 RILPL2Q969X0 211 aa13.68□□□□□ -0.22
CNOT4-208ENST00000465721 ZFP91Q96JP5 570 aaPredicted RBP13.68□□□□□ -0.22
CNOT4-208ENST00000465721 NSUN3Q9H649 340 aaKnown RBP13.68□□□□□ -0.22
CNOT4-208ENST00000465721 TUT1Q9H6E5 874 aaKnown RBP13.68□□□□□ -0.22
CNOT4-208ENST00000465721 BCAS3Q9H6U6 928 aa13.68□□□□□ -0.22
CNOT4-208ENST00000465721 KLRF2D3W0D1 207 aa13.67□□□□□ -0.22
CNOT4-208ENST00000465721 ZBTB5O15062 677 aa13.67□□□□□ -0.22
CNOT4-208ENST00000465721 CCND2P30279 289 aa13.67□□□□□ -0.22
CNOT4-208ENST00000465721 LTBRP36941 435 aa13.67□□□□□ -0.22
CNOT4-208ENST00000465721 RRP1P56182 461 aaKnown RBP13.67□□□□□ -0.22
CNOT4-208ENST00000465721 SEC23AQ15436 765 aa13.67□□□□□ -0.22
CNOT4-208ENST00000465721 TRIM50Q86XT4 487 aa13.67□□□□□ -0.22
CNOT4-208ENST00000465721 UIMC1Q96RL1 719 aa13.67□□□□□ -0.22
CNOT4-208ENST00000465721 IFIH1Q9BYX4 1025 aaKnown RBP13.67□□□□□ -0.22
CNOT4-208ENST00000465721 LNPKQ9C0E8 428 aa13.67□□□□□ -0.22
CNOT4-208ENST00000465721 RNPEPQ9H4A4 650 aa13.67□□□□□ -0.22
CNOT4-208ENST00000465721 PRKAG3Q9UGI9 489 aa13.67□□□□□ -0.22
CNOT4-208ENST00000465721 MAD2L2Q9UI95 211 aa13.67□□□□□ -0.22
CNOT4-208ENST00000465721 PCDHA1Q9Y5I3 950 aa13.67□□□□□ -0.22
CNOT4-208ENST00000465721 FNDC1Q4ZHG4 1894 aaPredicted RBP13.67□□□□□ -0.22
CNOT4-208ENST00000465721 UPP2O95045 317 aa13.66□□□□□ -0.22
CNOT4-208ENST00000465721 ADAM17P78536 824 aa13.66□□□□□ -0.22
CNOT4-208ENST00000465721 NHLH1Q02575 133 aa13.66□□□□□ -0.22
CNOT4-208ENST00000465721 SEMA3FQ13275 785 aa13.66□□□□□ -0.22
CNOT4-208ENST00000465721 CSPP1Q1MSJ5 1256 aa13.66□□□□□ -0.22
CNOT4-208ENST00000465721 IFIT1BQ5T764 474 aaKnown RBP13.66□□□□□ -0.22
CNOT4-208ENST00000465721 CWC27Q6UX04 472 aaKnown RBP13.66□□□□□ -0.22
CNOT4-208ENST00000465721 RPAINQ86UA6 219 aa13.66□□□□□ -0.22
CNOT4-208ENST00000465721 ADHFE1Q8IWW8 467 aa13.66□□□□□ -0.22
CNOT4-208ENST00000465721 SAMD3Q8N6K7 520 aa13.66□□□□□ -0.22
CNOT4-208ENST00000465721 APBB2Q92870 758 aa13.66□□□□□ -0.22
CNOT4-208ENST00000465721 UBAC1Q9BSL1 405 aa13.66□□□□□ -0.22
CNOT4-208ENST00000465721 DSCC1Q9BVC3 393 aa13.66□□□□□ -0.22
CNOT4-208ENST00000465721 MLXIPQ9HAP2 919 aa13.66□□□□□ -0.22
CNOT4-208ENST00000465721 RC3H2Q9HBD1 1191 aaKnown RBP13.66□□□□□ -0.22
CNOT4-208ENST00000465721 MYO15AQ9UKN7 3530 aa13.65□□□□□ -0.22
CNOT4-208ENST00000465721 PALM3A6NDB9 673 aaPredicted RBP13.65□□□□□ -0.22
CNOT4-208ENST00000465721 C5orf67F2Z3F1 127 aa13.65□□□□□ -0.22
CNOT4-208ENST00000465721 ICAM3P32942 547 aa13.65□□□□□ -0.22
CNOT4-208ENST00000465721 CTNNB1P35222 781 aa13.65□□□□□ -0.22
CNOT4-208ENST00000465721 MRE11P49959 708 aa13.65□□□□□ -0.22
CNOT4-208ENST00000465721 MRPS9P82933 396 aaKnown RBP13.65□□□□□ -0.22
CNOT4-208ENST00000465721 CTC1Q2NKJ3 1217 aa13.65□□□□□ -0.22
CNOT4-208ENST00000465721 FAM26DQ5JW98 314 aa13.65□□□□□ -0.22
CNOT4-208ENST00000465721 METTL7BQ6UX53 244 aa13.65□□□□□ -0.22
CNOT4-208ENST00000465721 LMBR1Q8WVP7 490 aa13.65□□□□□ -0.22
CNOT4-208ENST00000465721 INPP4AQ96PE3 977 aaPredicted RBP13.65□□□□□ -0.22
CNOT4-208ENST00000465721 KRT23Q9C075 422 aa13.65□□□□□ -0.22
CNOT4-208ENST00000465721 SETD4Q9NVD3 440 aa13.65□□□□□ -0.22
CNOT4-208ENST00000465721 CLDND1Q9NY35 253 aa13.65□□□□□ -0.22
CNOT4-208ENST00000465721 FAM50BQ9Y247 325 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms