RNA–Protein interactions for RNA: ENST00000461654.1

TMEM39A-203, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-203ENST00000461654 LRRC41Q15345 812 aa17.13■□□□□ 0.33
TMEM39A-203ENST00000461654 CCDC183Q5T5S1 534 aa17.13■□□□□ 0.33
TMEM39A-203ENST00000461654 ARHGEF16Q5VV41 709 aa17.13■□□□□ 0.33
TMEM39A-203ENST00000461654 XRRA1Q6P2D8 792 aa17.13■□□□□ 0.33
TMEM39A-203ENST00000461654 SHC4Q6S5L8 630 aa17.13■□□□□ 0.33
TMEM39A-203ENST00000461654 POTEDQ86YR6 584 aa17.13■□□□□ 0.33
TMEM39A-203ENST00000461654 SLFN12Q8IYM2 578 aa17.13■□□□□ 0.33
TMEM39A-203ENST00000461654 RMDN3Q96TC7 470 aa17.13■□□□□ 0.33
TMEM39A-203ENST00000461654 GZF1Q9H116 711 aaPredicted RBP17.13■□□□□ 0.33
TMEM39A-203ENST00000461654 TMEM60Q9H2L4 133 aa17.13■□□□□ 0.33
TMEM39A-203ENST00000461654 ABHD16BQ9H3Z7 469 aa17.13■□□□□ 0.33
TMEM39A-203ENST00000461654 A1CFQ9NQ94 594 aaKnown RBP17.13■□□□□ 0.33
TMEM39A-203ENST00000461654 XPNPEP3Q9NQH7 507 aa17.13■□□□□ 0.33
TMEM39A-203ENST00000461654 FAM184BQ9ULE4 1060 aa17.13■□□□□ 0.33
TMEM39A-203ENST00000461654 PLXNA1Q9UIW2 1896 aa17.13■□□□□ 0.33
TMEM39A-203ENST00000461654 B4DLN1 442 aa17.12■□□□□ 0.33
TMEM39A-203ENST00000461654 KBTBD13C9JR72 458 aa17.12■□□□□ 0.33
TMEM39A-203ENST00000461654 TBX3O15119 743 aa17.12■□□□□ 0.33
TMEM39A-203ENST00000461654 LETM1O95202 739 aaPredicted RBP17.12■□□□□ 0.33
TMEM39A-203ENST00000461654 PFKFB1P16118 471 aa17.12■□□□□ 0.33
TMEM39A-203ENST00000461654 TXKP42681 527 aa17.12■□□□□ 0.33
TMEM39A-203ENST00000461654 SNX17Q15036 470 aa17.12■□□□□ 0.33
TMEM39A-203ENST00000461654 Q4G0T1 1027 aa17.12■□□□□ 0.33
TMEM39A-203ENST00000461654 PRR16Q569H4 304 aa17.12■□□□□ 0.33
TMEM39A-203ENST00000461654 C1orf53Q5VUE5 145 aa17.12■□□□□ 0.33
TMEM39A-203ENST00000461654 SLC39A5Q6ZMH5 540 aa17.12■□□□□ 0.33
TMEM39A-203ENST00000461654 NSUN6Q8TEA1 469 aaKnown RBP17.12■□□□□ 0.33
TMEM39A-203ENST00000461654 CCDC34Q96HJ3 373 aa17.12■□□□□ 0.33
TMEM39A-203ENST00000461654 AK8Q96MA6 479 aa17.12■□□□□ 0.33
TMEM39A-203ENST00000461654 MBOAT7Q96N66 472 aa17.12■□□□□ 0.33
TMEM39A-203ENST00000461654 TAAR1Q96RJ0 339 aa17.12■□□□□ 0.33
TMEM39A-203ENST00000461654 MPHOSPH6Q99547 160 aaKnown RBP17.12■□□□□ 0.33
TMEM39A-203ENST00000461654 PYM1Q9BRP8 204 aaKnown RBP17.12■□□□□ 0.33
TMEM39A-203ENST00000461654 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.12■□□□□ 0.33
TMEM39A-203ENST00000461654 DACT1Q9NYF0 836 aa17.12■□□□□ 0.33
TMEM39A-203ENST00000461654 CYP39A1Q9NYL5 469 aa17.12■□□□□ 0.33
TMEM39A-203ENST00000461654 ZMYND8Q9ULU4 1186 aaPredicted RBP17.12■□□□□ 0.33
TMEM39A-203ENST00000461654 PHF24Q9UPV7 400 aa17.12■□□□□ 0.33
TMEM39A-203ENST00000461654 POTEB2H3BUK9 544 aa17.11■□□□□ 0.33
TMEM39A-203ENST00000461654 SLC37A4O43826 429 aa17.11■□□□□ 0.33
TMEM39A-203ENST00000461654 NR1I2O75469 434 aa17.11■□□□□ 0.33
TMEM39A-203ENST00000461654 SYKP43405 635 aa17.11■□□□□ 0.33
TMEM39A-203ENST00000461654 NDUFA8P51970 172 aa17.11■□□□□ 0.33
TMEM39A-203ENST00000461654 SETQ01105 290 aaPredicted RBP17.11■□□□□ 0.33
TMEM39A-203ENST00000461654 ACVR2BQ13705 512 aa17.11■□□□□ 0.33
TMEM39A-203ENST00000461654 PCNX4Q63HM2 1172 aa17.11■□□□□ 0.33
TMEM39A-203ENST00000461654 RNF180Q86T96 592 aa17.11■□□□□ 0.33
TMEM39A-203ENST00000461654 MTMR9Q96QG7 549 aa17.11■□□□□ 0.33
TMEM39A-203ENST00000461654 TSEN34Q9BSV6 310 aaKnown RBP17.11■□□□□ 0.33
TMEM39A-203ENST00000461654 NUP62CLQ9H1M0 184 aa17.11■□□□□ 0.33
TMEM39A-203ENST00000461654 GOLPH3LQ9H4A5 285 aa17.11■□□□□ 0.33
TMEM39A-203ENST00000461654 PXMP2Q9NR77 195 aa17.11■□□□□ 0.33
TMEM39A-203ENST00000461654 COL20A1Q9P218 1284 aa17.11■□□□□ 0.33
TMEM39A-203ENST00000461654 ADD3Q9UEY8 706 aaKnown RBP17.11■□□□□ 0.33
TMEM39A-203ENST00000461654 KCNH3Q9ULD8 1083 aa17.11■□□□□ 0.33
TMEM39A-203ENST00000461654 CEP290O15078 2479 aa17.1■□□□□ 0.33
TMEM39A-203ENST00000461654 FAM237AA0A1B0GTK4 181 aa17.1■□□□□ 0.33
TMEM39A-203ENST00000461654 ADAMTS4O75173 837 aa17.1■□□□□ 0.33
TMEM39A-203ENST00000461654 DUSP11O75319 330 aaKnown RBP17.1■□□□□ 0.33
TMEM39A-203ENST00000461654 EIF2AK2P19525 551 aaKnown RBP17.1■□□□□ 0.33
TMEM39A-203ENST00000461654 CCND2P30279 289 aa17.1■□□□□ 0.33
TMEM39A-203ENST00000461654 UBA7P41226 1012 aa17.1■□□□□ 0.33
TMEM39A-203ENST00000461654 NKX3-2P78367 333 aa17.1■□□□□ 0.33
TMEM39A-203ENST00000461654 CNTN2Q02246 1040 aa17.1■□□□□ 0.33
TMEM39A-203ENST00000461654 CEP55Q53EZ4 464 aa17.1■□□□□ 0.33
TMEM39A-203ENST00000461654 SPECC1Q5M775 1068 aa17.1■□□□□ 0.33
TMEM39A-203ENST00000461654 ARMCX2Q7L311 632 aa17.1■□□□□ 0.33
TMEM39A-203ENST00000461654 PLA2G4DQ86XP0 818 aa17.1■□□□□ 0.33
TMEM39A-203ENST00000461654 KLHDC9Q8NEP7 349 aa17.1■□□□□ 0.33
TMEM39A-203ENST00000461654 DNERQ8NFT8 737 aa17.1■□□□□ 0.33
TMEM39A-203ENST00000461654 RASSF8Q8NHQ8 419 aa17.1■□□□□ 0.33
TMEM39A-203ENST00000461654 FAM20AQ96MK3 541 aa17.1■□□□□ 0.33
TMEM39A-203ENST00000461654 KATNBL1Q9H079 304 aa17.1■□□□□ 0.33
TMEM39A-203ENST00000461654 TMEM63CQ9P1W3 806 aa17.1■□□□□ 0.33
TMEM39A-203ENST00000461654 PCDHA12Q9UN75 941 aa17.1■□□□□ 0.33
TMEM39A-203ENST00000461654 FRMPD4Q14CM0 1322 aa17.1■□□□□ 0.33
TMEM39A-203ENST00000461654 SOWAHBA6NEL2 793 aa17.09■□□□□ 0.33
TMEM39A-203ENST00000461654 ASB14A6NK59 587 aa17.09■□□□□ 0.33
TMEM39A-203ENST00000461654 CTAGE5O15320 804 aa17.09■□□□□ 0.33
TMEM39A-203ENST00000461654 EDIL3O43854 480 aa17.09■□□□□ 0.33
TMEM39A-203ENST00000461654 PGK1P00558 417 aa17.09■□□□□ 0.33
TMEM39A-203ENST00000461654 MYCLP12524 364 aaPredicted RBP17.09■□□□□ 0.33
TMEM39A-203ENST00000461654 SYN1P17600 705 aa17.09■□□□□ 0.33
TMEM39A-203ENST00000461654 ADCYAP1R1P41586 468 aa17.09■□□□□ 0.33
TMEM39A-203ENST00000461654 TECP42680 631 aa17.09■□□□□ 0.33
TMEM39A-203ENST00000461654 FXR2P51116 673 aaKnown RBP eCLIP17.09■□□□□ 0.33
TMEM39A-203ENST00000461654 GRIN1Q05586 938 aa17.09■□□□□ 0.33
TMEM39A-203ENST00000461654 PDIA5Q14554 519 aa17.09■□□□□ 0.33
TMEM39A-203ENST00000461654 PGM5Q15124 567 aa17.09■□□□□ 0.33
TMEM39A-203ENST00000461654 NIPA1Q7RTP0 329 aa17.09■□□□□ 0.33
TMEM39A-203ENST00000461654 FMR1NBQ8N0W7 255 aaPredicted RBP17.09■□□□□ 0.33
TMEM39A-203ENST00000461654 ENGASEQ8NFI3 743 aa17.09■□□□□ 0.33
TMEM39A-203ENST00000461654 SYMPKQ92797 1274 aaKnown RBP17.09■□□□□ 0.33
TMEM39A-203ENST00000461654 MXRA8Q9BRK3 442 aa17.09■□□□□ 0.33
TMEM39A-203ENST00000461654 SDF4Q9BRK5 362 aa17.09■□□□□ 0.33
TMEM39A-203ENST00000461654 PDCD2LQ9BRP1 358 aa17.09■□□□□ 0.33
TMEM39A-203ENST00000461654 TNMDQ9H2S6 317 aa17.09■□□□□ 0.33
TMEM39A-203ENST00000461654 TTC12Q9H892 705 aaPredicted RBP17.09■□□□□ 0.33
TMEM39A-203ENST00000461654 PCDH10Q9P2E7 1040 aa17.09■□□□□ 0.33
TMEM39A-203ENST00000461654 LRWD1Q9UFC0 647 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms