RNA–Protein interactions for RNA: ENST00000453030.5

GARNL3-210, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-210ENST00000453030 SMIM10L2AP0DMW4 78 aa13.51□□□□□ -0.25
GARNL3-210ENST00000453030 SMIM10L2BP0DMW5 78 aa13.51□□□□□ -0.25
GARNL3-210ENST00000453030 SP4Q02446 784 aa13.51□□□□□ -0.25
GARNL3-210ENST00000453030 TRAF1Q13077 416 aa13.51□□□□□ -0.25
GARNL3-210ENST00000453030 SART3Q15020 963 aaKnown RBP13.51□□□□□ -0.25
GARNL3-210ENST00000453030 SERINC5Q86VE9 423 aa13.51□□□□□ -0.25
GARNL3-210ENST00000453030 TRIM50Q86XT4 487 aa13.51□□□□□ -0.25
GARNL3-210ENST00000453030 SAMD3Q8N6K7 520 aa13.51□□□□□ -0.25
GARNL3-210ENST00000453030 DBF4BQ8NFT6 615 aa13.51□□□□□ -0.25
GARNL3-210ENST00000453030 RUFY2Q8WXA3 655 aa13.51□□□□□ -0.25
GARNL3-210ENST00000453030 BCAS3Q9H6U6 928 aa13.51□□□□□ -0.25
GARNL3-210ENST00000453030 SUGCTQ9HAC7 445 aa13.51□□□□□ -0.25
GARNL3-210ENST00000453030 FRMPD4Q14CM0 1322 aa13.5□□□□□ -0.25
GARNL3-210ENST00000453030 RSPH10B2B2RC85 870 aa13.5□□□□□ -0.25
GARNL3-210ENST00000453030 E7EWF7 191 aa13.5□□□□□ -0.25
GARNL3-210ENST00000453030 H3BRB1 525 aa13.5□□□□□ -0.25
GARNL3-210ENST00000453030 TREHO43280 583 aa13.5□□□□□ -0.25
GARNL3-210ENST00000453030 RSPH10BP0C881 870 aa13.5□□□□□ -0.25
GARNL3-210ENST00000453030 TGFB3P10600 412 aa13.5□□□□□ -0.25
GARNL3-210ENST00000453030 CHMLP26374 656 aa13.5□□□□□ -0.25
GARNL3-210ENST00000453030 ERVK-21P61565 698 aa13.5□□□□□ -0.25
GARNL3-210ENST00000453030 MRPS9P82933 396 aaKnown RBP13.5□□□□□ -0.25
GARNL3-210ENST00000453030 TROAPQ12815 778 aa13.5□□□□□ -0.25
GARNL3-210ENST00000453030 GNPTABQ3T906 1256 aa13.5□□□□□ -0.25
GARNL3-210ENST00000453030 CATIPQ7Z7H3 387 aa13.5□□□□□ -0.25
GARNL3-210ENST00000453030 NCOA7Q8NI08 942 aa13.5□□□□□ -0.25
GARNL3-210ENST00000453030 C17orf80Q9BSJ5 609 aa13.5□□□□□ -0.25
GARNL3-210ENST00000453030 MYL10Q9BUA6 226 aa13.5□□□□□ -0.25
GARNL3-210ENST00000453030 TUT1Q9H6E5 874 aaKnown RBP13.5□□□□□ -0.25
GARNL3-210ENST00000453030 RTEL1Q9NZ71 1219 aa13.5□□□□□ -0.25
GARNL3-210ENST00000453030 AMHP03971 560 aa13.49□□□□□ -0.25
GARNL3-210ENST00000453030 ANTXR2P58335 489 aa13.49□□□□□ -0.25
GARNL3-210ENST00000453030 SEMA3FQ13275 785 aa13.49□□□□□ -0.25
GARNL3-210ENST00000453030 METTL7BQ6UX53 244 aa13.49□□□□□ -0.25
GARNL3-210ENST00000453030 CYFIP1Q7L576 1253 aa13.49□□□□□ -0.25
GARNL3-210ENST00000453030 INPP4AQ96PE3 977 aaPredicted RBP13.49□□□□□ -0.25
GARNL3-210ENST00000453030 TELO2Q9Y4R8 837 aa13.49□□□□□ -0.25
GARNL3-210ENST00000453030 C5orf42Q9H799 3197 aa13.49□□□□□ -0.25
GARNL3-210ENST00000453030 KIAA1671Q9BY89 1806 aa13.48□□□□□ -0.25
GARNL3-210ENST00000453030 FIBPO43427 364 aa13.48□□□□□ -0.25
GARNL3-210ENST00000453030 HOXC8P31273 242 aa13.48□□□□□ -0.25
GARNL3-210ENST00000453030 MKRN4PQ13434 485 aaPredicted RBP13.48□□□□□ -0.25
GARNL3-210ENST00000453030 NEDD9Q14511 834 aa13.48□□□□□ -0.25
GARNL3-210ENST00000453030 PLEKHG4Q58EX7 1191 aa13.48□□□□□ -0.25
GARNL3-210ENST00000453030 UTP14CQ5TAP6 766 aaKnown RBP13.48□□□□□ -0.25
GARNL3-210ENST00000453030 MB21D2Q8IYB1 491 aaPredicted RBP13.48□□□□□ -0.25
GARNL3-210ENST00000453030 FBXO22Q8NEZ5 403 aa13.48□□□□□ -0.25
GARNL3-210ENST00000453030 GPR20Q99678 358 aa13.48□□□□□ -0.25
GARNL3-210ENST00000453030 OSBPL7Q9BZF2 842 aa13.48□□□□□ -0.25
GARNL3-210ENST00000453030 RNPEPQ9H4A4 650 aa13.48□□□□□ -0.25
GARNL3-210ENST00000453030 SETD4Q9NVD3 440 aa13.48□□□□□ -0.25
GARNL3-210ENST00000453030 INSL6Q9Y581 213 aa13.48□□□□□ -0.25
GARNL3-210ENST00000453030 COL4A6Q14031 1691 aa13.47□□□□□ -0.25
GARNL3-210ENST00000453030 SGSM2O43147 1006 aa13.47□□□□□ -0.25
GARNL3-210ENST00000453030 STAM2O75886 525 aa13.47□□□□□ -0.25
GARNL3-210ENST00000453030 UPP2O95045 317 aa13.47□□□□□ -0.25
GARNL3-210ENST00000453030 ICAM3P32942 547 aa13.47□□□□□ -0.25
GARNL3-210ENST00000453030 ARHGAP4P98171 946 aa13.47□□□□□ -0.25
GARNL3-210ENST00000453030 USP17L6PQ6QN14 398 aa13.47□□□□□ -0.25
GARNL3-210ENST00000453030 ZNF654Q8IZM8 581 aa13.47□□□□□ -0.25
GARNL3-210ENST00000453030 CTCFLQ8NI51 663 aaPredicted RBP13.47□□□□□ -0.25
GARNL3-210ENST00000453030 SMARCC2Q8TAQ2 1214 aa13.47□□□□□ -0.25
GARNL3-210ENST00000453030 SEPT8Q92599 483 aa13.47□□□□□ -0.25
GARNL3-210ENST00000453030 CUL5Q93034 780 aa13.47□□□□□ -0.25
GARNL3-210ENST00000453030 YME1L1Q96TA2 773 aa13.47□□□□□ -0.25
GARNL3-210ENST00000453030 C1QTNF1Q9BXJ1 281 aa13.47□□□□□ -0.25
GARNL3-210ENST00000453030 UBE2ZQ9H832 354 aaPredicted RBP13.47□□□□□ -0.25
GARNL3-210ENST00000453030 LMCD1Q9NZU5 365 aa13.47□□□□□ -0.25
GARNL3-210ENST00000453030 SEC63Q9UGP8 760 aaKnown RBP13.47□□□□□ -0.25
GARNL3-210ENST00000453030 ZNF215Q9UL58 517 aaPredicted RBP13.47□□□□□ -0.25
GARNL3-210ENST00000453030 SPATA31C2B4DYI2 1134 aa13.46□□□□□ -0.25
GARNL3-210ENST00000453030 PLEKHA8P1O95397 391 aa13.46□□□□□ -0.25
GARNL3-210ENST00000453030 RXRAP19793 462 aa13.46□□□□□ -0.25
GARNL3-210ENST00000453030 KCNA5P22460 613 aa13.46□□□□□ -0.25
GARNL3-210ENST00000453030 IRX6P78412 446 aaPredicted RBP13.46□□□□□ -0.25
GARNL3-210ENST00000453030 HTRA4P83105 476 aaPredicted RBP13.46□□□□□ -0.25
GARNL3-210ENST00000453030 IGDCC4Q8TDY8 1250 aa13.46□□□□□ -0.25
GARNL3-210ENST00000453030 LMBR1Q8WVP7 490 aa13.46□□□□□ -0.25
GARNL3-210ENST00000453030 RRP36Q96EU6 259 aaKnown RBP13.46□□□□□ -0.25
GARNL3-210ENST00000453030 SPZ1Q9BXG8 430 aa13.46□□□□□ -0.25
GARNL3-210ENST00000453030 USP26Q9BXU7 913 aa13.46□□□□□ -0.25
GARNL3-210ENST00000453030 EPHX3Q9H6B9 360 aa13.46□□□□□ -0.25
GARNL3-210ENST00000453030 LY9Q9HBG7 655 aa13.46□□□□□ -0.25
GARNL3-210ENST00000453030 SUPT16HQ9Y5B9 1047 aaKnown RBP13.46□□□□□ -0.25
GARNL3-210ENST00000453030 RBM8AQ9Y5S9 174 aaKnown RBP13.46□□□□□ -0.25
GARNL3-210ENST00000453030 CAND2O75155 1236 aa13.45□□□□□ -0.26
GARNL3-210ENST00000453030 DDAH1O94760 285 aa13.45□□□□□ -0.26
GARNL3-210ENST00000453030 GNAT1P11488 350 aa13.45□□□□□ -0.26
GARNL3-210ENST00000453030 KIF5BP33176 963 aa13.45□□□□□ -0.26
GARNL3-210ENST00000453030 EPC2Q52LR7 807 aa13.45□□□□□ -0.26
GARNL3-210ENST00000453030 PCNX4Q63HM2 1172 aa13.45□□□□□ -0.26
GARNL3-210ENST00000453030 CASC1Q6TDU7 716 aa13.45□□□□□ -0.26
GARNL3-210ENST00000453030 NFXL1Q6ZNB6 911 aa13.45□□□□□ -0.26
GARNL3-210ENST00000453030 RAB11FIP4Q86YS3 637 aa13.45□□□□□ -0.26
GARNL3-210ENST00000453030 CMTR1Q8N1G2 835 aaKnown RBP13.45□□□□□ -0.26
GARNL3-210ENST00000453030 SP7Q8TDD2 431 aaPredicted RBP13.45□□□□□ -0.26
GARNL3-210ENST00000453030 KHSRPQ92945 711 aaKnown RBP eCLIP13.45□□□□□ -0.26
GARNL3-210ENST00000453030 IFIH1Q9BYX4 1025 aaKnown RBP13.45□□□□□ -0.26
GARNL3-210ENST00000453030 PKD2L1Q9P0L9 805 aa13.45□□□□□ -0.26
GARNL3-210ENST00000453030 TTC3P53804 2025 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms