RNA–Protein interactions for RNA: ENST00000452025.5

RPE-214, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 3 BASIC

Gene RPE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-214ENST00000452025 ADGRA3Q8IWK6 1321 aa12.55□□□□□ -0.4
RPE-214ENST00000452025 BAZ2BQ9UIF8 2168 aaKnown RBP12.54□□□□□ -0.4
RPE-214ENST00000452025 LOXHD1Q8IVV2 1947 aa12.54□□□□□ -0.4
RPE-214ENST00000452025 OPLAHO14841 1288 aa12.54□□□□□ -0.4
RPE-214ENST00000452025 MBTPS2O43462 519 aa12.54□□□□□ -0.4
RPE-214ENST00000452025 RGS20O76081 388 aa12.54□□□□□ -0.4
RPE-214ENST00000452025 LGALS2P05162 132 aa12.54□□□□□ -0.4
RPE-214ENST00000452025 LTBRP36941 435 aa12.54□□□□□ -0.4
RPE-214ENST00000452025 NMIQ13287 307 aaPredicted RBP12.54□□□□□ -0.4
RPE-214ENST00000452025 SMAD4Q13485 552 aaKnown RBP12.54□□□□□ -0.4
RPE-214ENST00000452025 SMAD2Q15796 467 aaKnown RBP12.54□□□□□ -0.4
RPE-214ENST00000452025 MCMDC2Q4G0Z9 681 aa12.54□□□□□ -0.4
RPE-214ENST00000452025 MYSM1Q5VVJ2 828 aa12.54□□□□□ -0.4
RPE-214ENST00000452025 FIBCD1Q8N539 461 aa12.54□□□□□ -0.4
RPE-214ENST00000452025 PRSS33Q8NF86 280 aa12.54□□□□□ -0.4
RPE-214ENST00000452025 GPKOWQ92917 476 aaPredicted RBP eCLIP12.54□□□□□ -0.4
RPE-214ENST00000452025 ZFP91Q96JP5 570 aaPredicted RBP12.54□□□□□ -0.4
RPE-214ENST00000452025 PDCD2LQ9BRP1 358 aa12.54□□□□□ -0.4
RPE-214ENST00000452025 C16orf70Q9BSU1 422 aa12.54□□□□□ -0.4
RPE-214ENST00000452025 MAF1Q9H063 256 aa12.54□□□□□ -0.4
RPE-214ENST00000452025 RNF41Q9H4P4 317 aaPredicted RBP12.54□□□□□ -0.4
RPE-214ENST00000452025 VAT1LQ9HCJ6 419 aa12.54□□□□□ -0.4
RPE-214ENST00000452025 PLXNA4Q9HCM2 1894 aa12.54□□□□□ -0.4
RPE-214ENST00000452025 TRIM6-TRIM34B2RNG4 842 aa12.53□□□□□ -0.4
RPE-214ENST00000452025 GRM6O15303 877 aa12.53□□□□□ -0.4
RPE-214ENST00000452025 LINC01565O15544 149 aa12.53□□□□□ -0.4
RPE-214ENST00000452025 PCP11498 1178 aaKnown RBP12.53□□□□□ -0.4
RPE-214ENST00000452025 HOXA13P31271 388 aaPredicted RBP12.53□□□□□ -0.4
RPE-214ENST00000452025 HOXC8P31273 242 aa12.53□□□□□ -0.4
RPE-214ENST00000452025 GTF2F1P35269 517 aaKnown RBP eCLIP12.53□□□□□ -0.4
RPE-214ENST00000452025 HSD17B4P51659 736 aa12.53□□□□□ -0.4
RPE-214ENST00000452025 HERC4Q5GLZ8 1057 aaPredicted RBP12.53□□□□□ -0.4
RPE-214ENST00000452025 TRIM50Q86XT4 487 aa12.53□□□□□ -0.4
RPE-214ENST00000452025 RNF135Q8IUD6 432 aa12.53□□□□□ -0.4
RPE-214ENST00000452025 C11orf84Q9BUA3 381 aaPredicted RBP12.53□□□□□ -0.4
RPE-214ENST00000452025 IGFLR1Q9H665 355 aa12.53□□□□□ -0.4
RPE-214ENST00000452025 JMJD4Q9H9V9 463 aa12.53□□□□□ -0.4
RPE-214ENST00000452025 ZBTB47Q9UFB7 747 aaPredicted RBP12.53□□□□□ -0.4
RPE-214ENST00000452025 TTC3P53804 2025 aa12.52□□□□□ -0.4
RPE-214ENST00000452025 H3BRB1 525 aa12.52□□□□□ -0.41
RPE-214ENST00000452025 STXBP3O00186 592 aa12.52□□□□□ -0.41
RPE-214ENST00000452025 NOP56O00567 594 aaKnown RBP12.52□□□□□ -0.41
RPE-214ENST00000452025 CAND2O75155 1236 aa12.52□□□□□ -0.41
RPE-214ENST00000452025 KDM4AO75164 1064 aa12.52□□□□□ -0.41
RPE-214ENST00000452025 PPFIA4O75335 1185 aa12.52□□□□□ -0.41
RPE-214ENST00000452025 PARP1P09874 1014 aaKnown RBP12.52□□□□□ -0.41
RPE-214ENST00000452025 GHRP10912 638 aa12.52□□□□□ -0.41
RPE-214ENST00000452025 CCND2P30279 289 aa12.52□□□□□ -0.41
RPE-214ENST00000452025 NDUFV1P49821 464 aa12.52□□□□□ -0.41
RPE-214ENST00000452025 SP2Q02086 613 aa12.52□□□□□ -0.41
RPE-214ENST00000452025 PGM5Q15124 567 aa12.52□□□□□ -0.41
RPE-214ENST00000452025 CTC1Q2NKJ3 1217 aa12.52□□□□□ -0.41
RPE-214ENST00000452025 IQCA1Q86XH1 822 aa12.52□□□□□ -0.41
RPE-214ENST00000452025 DGKHQ86XP1 1220 aa12.52□□□□□ -0.41
RPE-214ENST00000452025 APBB2Q92870 758 aa12.52□□□□□ -0.41
RPE-214ENST00000452025 IL17RAQ96F46 866 aa12.52□□□□□ -0.41
RPE-214ENST00000452025 LMAN2LQ9H0V9 348 aa12.52□□□□□ -0.41
RPE-214ENST00000452025 TUT1Q9H6E5 874 aaKnown RBP12.52□□□□□ -0.41
RPE-214ENST00000452025 MLXIPQ9HAP2 919 aa12.52□□□□□ -0.41
RPE-214ENST00000452025 CD207Q9UJ71 328 aa12.52□□□□□ -0.41
RPE-214ENST00000452025 PCDHB15Q9Y5E8 787 aa12.52□□□□□ -0.41
RPE-214ENST00000452025 USP34Q70CQ2 3546 aa12.52□□□□□ -0.41
RPE-214ENST00000452025 B4E1Z4 1266 aa12.51□□□□□ -0.41
RPE-214ENST00000452025 C5orf67F2Z3F1 127 aa12.51□□□□□ -0.41
RPE-214ENST00000452025 NCK2O43639 380 aa12.51□□□□□ -0.41
RPE-214ENST00000452025 LINC00271P0C7V0 271 aa12.51□□□□□ -0.41
RPE-214ENST00000452025 PTPN5P54829 565 aa12.51□□□□□ -0.41
RPE-214ENST00000452025 ARHGAP4P98171 946 aa12.51□□□□□ -0.41
RPE-214ENST00000452025 KCNV1Q6PIU1 500 aa12.51□□□□□ -0.41
RPE-214ENST00000452025 ENAHQ8N8S7 591 aaPredicted RBP12.51□□□□□ -0.41
RPE-214ENST00000452025 AMNQ9BXJ7 453 aa12.51□□□□□ -0.41
RPE-214ENST00000452025 RNPEPQ9H4A4 650 aa12.51□□□□□ -0.41
RPE-214ENST00000452025 SETD4Q9NVD3 440 aa12.51□□□□□ -0.41
RPE-214ENST00000452025 RWDD3Q9Y3V2 267 aa12.51□□□□□ -0.41
RPE-214ENST00000452025 SUPT16HQ9Y5B9 1047 aaKnown RBP12.51□□□□□ -0.41
RPE-214ENST00000452025 CACNA1HO95180 2353 aa12.5□□□□□ -0.41
RPE-214ENST00000452025 CFAP54Q96N23 3096 aa12.5□□□□□ -0.41
RPE-214ENST00000452025 TMEM221A6NGB7 291 aa12.5□□□□□ -0.41
RPE-214ENST00000452025 M0R296 226 aa12.5□□□□□ -0.41
RPE-214ENST00000452025 PPP1R11O60927 126 aaPredicted RBP12.5□□□□□ -0.41
RPE-214ENST00000452025 MMP1P03956 469 aa12.5□□□□□ -0.41
RPE-214ENST00000452025 BMPR1AP36894 532 aa12.5□□□□□ -0.41
RPE-214ENST00000452025 SP4Q02446 784 aa12.5□□□□□ -0.41
RPE-214ENST00000452025 IER5LQ5T953 404 aa12.5□□□□□ -0.41
RPE-214ENST00000452025 FCHSD1Q86WN1 690 aa12.5□□□□□ -0.41
RPE-214ENST00000452025 HOMER1Q86YM7 354 aa12.5□□□□□ -0.41
RPE-214ENST00000452025 SUGP1Q8IWZ8 645 aaKnown RBP12.5□□□□□ -0.41
RPE-214ENST00000452025 STAG2Q8N3U4 1231 aa12.5□□□□□ -0.41
RPE-214ENST00000452025 LMBR1Q8WVP7 490 aa12.5□□□□□ -0.41
RPE-214ENST00000452025 ZSCAN10Q96SZ4 725 aaPredicted RBP12.5□□□□□ -0.41
RPE-214ENST00000452025 BCAS3Q9H6U6 928 aa12.5□□□□□ -0.41
RPE-214ENST00000452025 RC3H2Q9HBD1 1191 aaKnown RBP12.5□□□□□ -0.41
RPE-214ENST00000452025 FAM86C1Q9NVL1 165 aa12.5□□□□□ -0.41
RPE-214ENST00000452025 PLXNA3P51805 1871 aa12.5□□□□□ -0.41
RPE-214ENST00000452025 RB1P06400 928 aa12.49□□□□□ -0.41
RPE-214ENST00000452025 PDE1AP54750 535 aa12.49□□□□□ -0.41
RPE-214ENST00000452025 GHRHRQ02643 423 aa12.49□□□□□ -0.41
RPE-214ENST00000452025 BTG3Q14201 252 aaPredicted RBP12.49□□□□□ -0.41
RPE-214ENST00000452025 CCDC178Q5BJE1 867 aa12.49□□□□□ -0.41
RPE-214ENST00000452025 UTP14CQ5TAP6 766 aaKnown RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms